RNA–Protein interactions for RNA: ENST00000469232.5

NPHP3-204, Transcript of nephrocystin 3, humanhuman

TSL 2

Gene NPHP3, Length 1,616 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-204ENST00000469232 DEFB131BA0A096LNP1 70 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 LOC100131303A0A0U1RQF7 123 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 F5H768 121 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 I3L3M4 83 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 NUPR1O60356 82 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 SERF1AO75920 110 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 TSHBP01222 138 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 LINC00614P0C842 121 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 SH2D6Q7Z4S9 175 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 GTSF1LQ9H1H1 148 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 TNFRSF18Q9Y5U5 241 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 A0A096LNJ9 63 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 A0A096LPF7 62 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 GYPEP15421 78 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 MRPL23Q16540 153 aaKnown RBP5.66□□□□□ -1.5
NPHP3-204ENST00000469232 ZNRF2Q8NHG8 242 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 AP5S1Q9NUS5 200 aa5.66□□□□□ -1.5
NPHP3-204ENST00000469232 TMEM97Q5BJF2 176 aa5.65□□□□□ -1.51
NPHP3-204ENST00000469232 NTM-AS1Q6ZSK4 140 aa5.65□□□□□ -1.51
NPHP3-204ENST00000469232 BAGE3Q86Y29 109 aa5.65□□□□□ -1.51
NPHP3-204ENST00000469232 PRSS3P2Q8NHM4 247 aa5.65□□□□□ -1.51
NPHP3-204ENST00000469232 PHLDA1Q8WV24 401 aaPredicted RBP5.65□□□□□ -1.51
NPHP3-204ENST00000469232 LOC389332A0A1B0GUA5 103 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 GAGE12JA6NER3 117 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 LINC01549A6NIU2 74 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 NDUFA6P56556 154 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 GAGE1Q13065 139 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 GAGE4Q13068 117 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 GAGE5Q13069 117 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 LAGE3Q14657 143 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 GAGE13Q4V321 117 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 ORMDL2Q53FV1 153 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 FA2HQ7L5A8 372 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 HIST3H2BBQ8N257 126 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 C15orf53Q8NAA6 179 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 KIR2DL4Q99706 377 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 CHCHD7Q9BUK0 85 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 ICOSQ9Y6W8 199 aa5.64□□□□□ -1.51
NPHP3-204ENST00000469232 TGP01266 2768 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 IFITM10A6NMD0 228 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 FCER1GP30273 86 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 PDZD11Q5EBL8 140 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 NEGR1Q7Z3B1 354 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 C20orf203Q8NBC4 194 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 ATP6V0E2Q8NHE4 81 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 PLECQ15149 4684 aaKnown RBP5.63□□□□□ -1.51
NPHP3-204ENST00000469232 CSMD3Q7Z407 3707 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 TRBV6-8A0A0A6YYG3 113 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 IGHV1-24A0A0C4DH33 117 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 A0A0J9YY99 117 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 NPSP0C0P6 89 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 HTN3P15516 51 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 G0S2P27469 103 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 TCTAP57738 103 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 COTL1Q14019 142 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 KRTAP19-4Q3LI73 84 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 CEMP1Q6PRD7 247 aaPredicted RBP5.63□□□□□ -1.51
NPHP3-204ENST00000469232 TIMM21Q9BVV7 248 aa5.63□□□□□ -1.51
NPHP3-204ENST00000469232 H7C423 109 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 HSBP1O75506 76 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 SNRPEP62304 92 aaKnown RBP5.62□□□□□ -1.51
NPHP3-204ENST00000469232 LCE1DQ5T752 114 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 RNASEKQ6P5S7 137 aaKnown RBP5.62□□□□□ -1.51
NPHP3-204ENST00000469232 MRPL52Q86TS9 123 aaKnown RBP5.62□□□□□ -1.51
NPHP3-204ENST00000469232 FAM104AQ969W3 186 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 TOMM6Q96B49 74 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 PYGO1Q9Y3Y4 419 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 CSDC2Q9Y534 153 aaKnown RBP5.62□□□□□ -1.51
NPHP3-204ENST00000469232 VPS13DQ5THJ4 4388 aa5.62□□□□□ -1.51
NPHP3-204ENST00000469232 NUPR2A6NF83 97 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 IGIPA6NJ69 53 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 HBDP02042 147 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 S100A6P06703 90 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 LELP1Q5T871 98 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 LYPD5Q6UWN5 251 aa5.61□□□□□ -1.51
NPHP3-204ENST00000469232 TMA7Q9Y2S6 64 aaKnown RBP5.61□□□□□ -1.51
NPHP3-204ENST00000469232 IGHV3-38A0A0C4DH36 116 aa5.6□□□□□ -1.51
NPHP3-204ENST00000469232 HIST1H2BLQ99880 126 aa5.6□□□□□ -1.51
NPHP3-204ENST00000469232 APLNQ9ULZ1 77 aa5.6□□□□□ -1.51
NPHP3-204ENST00000469232 STARD9Q9P2P6 4700 aa5.6□□□□□ -1.51
NPHP3-204ENST00000469232 TRBV25-1A0A075B6N4 114 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 AMTP48728 403 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 MRPS36P82909 103 aaKnown RBP5.59□□□□□ -1.51
NPHP3-204ENST00000469232 ESRGQ1W209 222 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 LCE4AQ5TA78 99 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 C2orf66Q6UXQ4 117 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 FAM19A2Q8N3H0 131 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 TMEM18Q96B42 140 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 WWC2-AS2Q96NR7 200 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 TIMM17AQ99595 171 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 TMEM243Q9BU79 118 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 CYSLTR1Q9Y271 337 aa5.59□□□□□ -1.51
NPHP3-204ENST00000469232 A0A1B0GUV1 79 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 NUDT3O95989 172 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 ERASQ7Z444 233 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 SPATA12Q7Z6I5 190 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 UPK3BQ9BT76 320 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 SPANXA1Q9NS26 97 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 UBE2D4Q9Y2X8 147 aa5.59□□□□□ -1.52
NPHP3-204ENST00000469232 DNAH1Q9P2D7 4330 aa5.58□□□□□ -1.52
Retrieved 100 of 20,778 RNA–protein pairs in 129.7 ms