RNA–Protein interactions for RNA: ENST00000467885.6

USP39-213, Transcript of ubiquitin specific peptidase 39, humanhuman

TSL 5

Gene USP39, Length 338 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP39-213ENST00000467885 HIST2H2BEQ16778 126 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 GAGE13Q4V321 117 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 HIST2H2BFQ5QNW6 126 aaPredicted RBP4.12□□□□□ -1.75
USP39-213ENST00000467885 LYPD5Q6UWN5 251 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 SREK1IP1Q8N9Q2 155 aaPredicted RBP4.12□□□□□ -1.75
USP39-213ENST00000467885 C18orf32Q8TCD1 76 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 DEFB104AQ8WTQ1 72 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 HIST1H2BHQ93079 126 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 HIST1H2BNQ99877 126 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 HIST1H2BMQ99879 126 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 PRADC1Q9BSG0 188 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 ST20Q9HBF5 79 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 APLNQ9ULZ1 77 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 LAMTOR2Q9Y2Q5 125 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 TNFRSF18Q9Y5U5 241 aa4.12□□□□□ -1.75
USP39-213ENST00000467885 SDHAF1A6NFY7 115 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 IGLL5B9A064 214 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 LINC00614P0C842 121 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 PMCHP20382 165 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 LINC00310P59036 64 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 RPL36AP83881 106 aaKnown RBP4.11□□□□□ -1.75
USP39-213ENST00000467885 MRPL23Q16540 153 aaKnown RBP4.11□□□□□ -1.75
USP39-213ENST00000467885 IQCJQ1A5X6 159 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 ESRGQ1W209 222 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 OR10J3Q5JRS4 329 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 NEGR1Q7Z3B1 354 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 Q8N8P6 123 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 ATP6V0E2Q8NHE4 81 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 RPL36ALQ969Q0 106 aaKnown RBP4.11□□□□□ -1.75
USP39-213ENST00000467885 TGP01266 2768 aa4.11□□□□□ -1.75
USP39-213ENST00000467885 STAB2Q8WWQ8 2551 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 IGHV3-38A0A0C4DH36 116 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 C1orf196B1AJZ1 125 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 I3L3M4 83 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 TSHBP01222 138 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 ESDP10768 282 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 COA6Q5JTJ3 125 aaKnown RBP4.1□□□□□ -1.75
USP39-213ENST00000467885 KRTAP5-3Q6L8H2 238 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 DAZ4Q86SG3 579 aaKnown RBP4.1□□□□□ -1.75
USP39-213ENST00000467885 PRSS3P2Q8NHM4 247 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 WWC2-AS2Q96NR7 200 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 GTSF1LQ9H1H1 148 aa4.1□□□□□ -1.75
USP39-213ENST00000467885 DAZ3Q9NR90 486 aaKnown RBP4.1□□□□□ -1.75
USP39-213ENST00000467885 TCAPO15273 167 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 NDUFA6P56556 154 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 TIRAPP58753 221 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 SH2D6Q7Z4S9 175 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 MUC7Q8TAX7 377 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 FAM104AQ969W3 186 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 CHCHD7Q9BUK0 85 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 SMIM2Q9BVW6 85 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 MAP1LC3AQ9H492 121 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 NXT2Q9NPJ8 142 aaKnown RBP4.09□□□□□ -1.75
USP39-213ENST00000467885 ICOSQ9Y6W8 199 aa4.09□□□□□ -1.75
USP39-213ENST00000467885 NACAE9PAV3 2078 aa4.09□□□□□ -1.76
USP39-213ENST00000467885 A0A096LNJ9 63 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 TRBV6-8A0A0A6YYG3 113 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 K7EMI3 77 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 NUDT3O95989 172 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 FCER1GP30273 86 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 RAB5BP61020 215 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 LAGE3Q14657 143 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 BAGE3Q86Y29 109 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 C15orf53Q8NAA6 179 aa4.08□□□□□ -1.76
USP39-213ENST00000467885 CHCHD1Q96BP2 118 aaKnown RBP4.08□□□□□ -1.76
USP39-213ENST00000467885 C5orf52A6NGY3 159 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 IGIPA6NJ69 53 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 SERF1AO75920 110 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 SCGB1D1O95968 90 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 MALP21145 153 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 TCTAP57738 103 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 COTL1Q14019 142 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 ZFAND6Q6FIF0 208 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 FAM19A2Q8N3H0 131 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 C20orf203Q8NBC4 194 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 KIR2DL4Q99706 377 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 C1orf43Q9BWL3 253 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 KLK5Q9Y337 293 aaPredicted RBP4.07□□□□□ -1.76
USP39-213ENST00000467885 LINC00588Q9Y4M8 146 aa4.07□□□□□ -1.76
USP39-213ENST00000467885 NUPR2A6NF83 97 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 IFITM10A6NMD0 228 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 C3orf84H3BNL1 204 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 SNRPEP62304 92 aaKnown RBP4.06□□□□□ -1.76
USP39-213ENST00000467885 PMCHL1Q16048 86 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 TMEM97Q5BJF2 176 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 PDZD11Q5EBL8 140 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 CASC10Q5T4H9 136 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 LELP1Q5T871 98 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 FA2HQ7L5A8 372 aa4.06□□□□□ -1.76
USP39-213ENST00000467885 TENM2Q9NT68 2774 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 IGHV1-24A0A0C4DH33 117 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 A0A1B0GUV1 79 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 H7C423 109 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 RPL39P62891 51 aaKnown RBP4.05□□□□□ -1.76
USP39-213ENST00000467885 ORMDL2Q53FV1 153 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 RNASEKQ6P5S7 137 aaKnown RBP4.05□□□□□ -1.76
USP39-213ENST00000467885 LINC00173Q6ZV60 143 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 MRPL52Q86TS9 123 aaKnown RBP4.05□□□□□ -1.76
USP39-213ENST00000467885 HIST3H2BBQ8N257 126 aa4.05□□□□□ -1.76
USP39-213ENST00000467885 TOMM6Q96B49 74 aa4.05□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 104.6 ms