RNA–Protein interactions for RNA: ENST00000467707.1

GAPVD1-211, Transcript of GTPase activating protein and VPS9 domains 1, humanhuman

TSL 3

Gene GAPVD1, Length 787 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GAPVD1-211ENST00000467707 EP300Q09472 2414 aaPredicted RBP0.84□□□□□ -2.28
GAPVD1-211ENST00000467707 KALRNO60229 2985 aa0.84□□□□□ -2.28
GAPVD1-211ENST00000467707 IGF2RP11717 2491 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 MYO9AB2RTY4 2548 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 DNHD1Q96M86 4753 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 PLXNB2O15031 1838 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 AKAP13Q12802 2813 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 DMXL2Q8TDJ6 3036 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 EDF1O60869 148 aaKnown RBP0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 HBDP02042 147 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 CD52P31358 61 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 SPINT3P49223 89 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 CCDC153Q494R4 210 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 OR8J3Q8NGG0 315 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 BRK1Q8WUW1 75 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 MAFIPQ8WZ33 124 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 MRPL35Q9NZE8 188 aaKnown RBP0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 DSPP15924 2871 aaKnown RBP0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 SMG1Q96Q15 3661 aaKnown RBP0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 UBR5O95071 2799 aaPredicted RBP0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 ITPR1Q14643 2758 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 C2CD3Q4AC94 2353 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 MUC16Q8WXI7 14507 aa0.83□□□□□ -2.28
GAPVD1-211ENST00000467707 CHD3Q12873 2000 aaKnown RBP0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 PSME4Q14997 1843 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 PHIPQ8WWQ0 1821 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 DOCK1Q14185 1865 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 POLQO75417 2590 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 NAV3Q8IVL0 2385 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 IGSF10Q6WRI0 2623 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 PNMA8CA0A1B0GUJ8 204 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 TMEM189A5PLL7 270 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 SCGB1A1P11684 91 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 ZNF137PP52743 207 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 PLAC4Q8WY50 150 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 LOC285556D6RIA3 1793 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 SIPA1L3O60292 1781 aaPredicted RBP0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 CITO14578 2027 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 CCDC171Q6TFL3 1326 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 DSPPQ9NZW4 1301 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 SPEF2Q9C093 1822 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 CNOT1A5YKK6 2376 aaKnown RBP0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 CDK5RAP2Q96SN8 1893 aa0.82□□□□□ -2.28
GAPVD1-211ENST00000467707 ATG2AQ2TAZ0 1938 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 A0A1B0GUL6 1792 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 DOCK2Q92608 1830 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 ZNF236Q9UL36 1845 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 EFCAB10A6NFE3 127 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 J3KT08 172 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 K7EP13 123 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 M0QZK8 103 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 IGF2P01344 180 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 SMCO1Q147U7 214 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 CCDC58Q4VC31 144 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 TSTD1Q8NFU3 115 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 GSKIPQ9P0R6 139 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 SPTAN1Q13813 2472 aaKnown RBP0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 DOPEY2Q9Y3R5 2298 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 CEP295Q9C0D2 2601 aa0.81□□□□□ -2.28
GAPVD1-211ENST00000467707 CELSR1Q9NYQ6 3014 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 BOD1L1Q8NFC6 3051 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 MIF4GDA9UHW6 222 aaKnown RBP0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 ATP6V1G2-DDX39BF2Z307 99 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 EVI2AP22794 236 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 S100A1P23297 94 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 CKS2P33552 79 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 QRFPP83859 136 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 RHOHQ15669 191 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 SMIM21Q3B7S5 101 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 Q5XG85 94 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 CSAG1Q6PB30 78 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 C2orf88Q9BSF0 95 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 UTP20O75691 2785 aaKnown RBP0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 MGAQ8IWI9 3026 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 MYO7AQ13402 2215 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 FOCADQ5VW36 1801 aa0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 NUP210Q8TEM1 1887 aaPredicted RBP0.8□□□□□ -2.28
GAPVD1-211ENST00000467707 NF1P21359 2839 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 SPG11Q96JI7 2443 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 ASXL3Q9C0F0 2248 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 A0A1B0GW64 132 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 HIGD1CA8MV81 97 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 DLEU1O43261 78 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 DPM2O94777 84 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 KDELR1P24390 212 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 CKS1BP61024 79 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 OR8B8Q15620 311 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 C6orf52Q5T4I8 152 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 IDO2Q6ZQW0 420 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 OR8I2Q8N0Y5 310 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 TCEAL4Q96EI5 215 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 TPT1P8Q9HAU6 139 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 COA4Q9NYJ1 87 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 PAIP2BQ9ULR5 123 aaKnown RBP0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 PTPRQQ9UMZ3 2332 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 TANC1Q9C0D5 1861 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 CREBBPQ92793 2442 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 ATMQ13315 3056 aa0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 SETD2Q9BYW2 2564 aaPredicted RBP0.79□□□□□ -2.28
GAPVD1-211ENST00000467707 FANCMQ8IYD8 2048 aa0.79□□□□□ -2.28
Retrieved 100 of 20,778 RNA–protein pairs in 59.2 ms