RNA–Protein interactions for RNA: ENST00000467182.1

COL4A1-202, Transcript of collagen type IV alpha 1 chain, humanhuman

TSL 3

Gene COL4A1, Length 593 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL4A1-202ENST00000467182 DYNC2H1Q8NCM8 4307 aaKnown RBP9.08□□□□□ -0.96
COL4A1-202ENST00000467182 A0A0J9YY99 117 aa9.07□□□□□ -0.96
COL4A1-202ENST00000467182 GYPEP15421 78 aa9.07□□□□□ -0.96
COL4A1-202ENST00000467182 CHCHD7Q9BUK0 85 aa9.07□□□□□ -0.96
COL4A1-202ENST00000467182 TRAV26-1A0A087WT03 109 aa9.06□□□□□ -0.96
COL4A1-202ENST00000467182 PAX4O43316 350 aa9.06□□□□□ -0.96
COL4A1-202ENST00000467182 NHLRC4P0CG21 123 aaPredicted RBP9.06□□□□□ -0.96
COL4A1-202ENST00000467182 HTN3P15516 51 aa9.06□□□□□ -0.96
COL4A1-202ENST00000467182 NTM-AS1Q6ZSK4 140 aa9.06□□□□□ -0.96
COL4A1-202ENST00000467182 DAZ4Q86SG3 579 aaKnown RBP9.06□□□□□ -0.96
COL4A1-202ENST00000467182 TOMM6Q96B49 74 aa9.06□□□□□ -0.96
COL4A1-202ENST00000467182 DAZ3Q9NR90 486 aaKnown RBP9.06□□□□□ -0.96
COL4A1-202ENST00000467182 LEPROTL1O95214 131 aa9.05□□□□□ -0.96
COL4A1-202ENST00000467182 NUDT3O95989 172 aa9.05□□□□□ -0.96
COL4A1-202ENST00000467182 C2orf66Q6UXQ4 117 aa9.05□□□□□ -0.96
COL4A1-202ENST00000467182 COL7A1Q02388 2944 aa9.05□□□□□ -0.96
COL4A1-202ENST00000467182 BTF3P20290 206 aaKnown RBP9.04□□□□□ -0.96
COL4A1-202ENST00000467182 COTL1Q14019 142 aa9.04□□□□□ -0.96
COL4A1-202ENST00000467182 C20orf203Q8NBC4 194 aa9.04□□□□□ -0.96
COL4A1-202ENST00000467182 GTSF1LQ9H1H1 148 aa9.04□□□□□ -0.96
COL4A1-202ENST00000467182 H3BNG1 76 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 C3orf79P0CE67 100 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 AKR1D1P51857 326 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 RPL39P62891 51 aaKnown RBP9.03□□□□□ -0.96
COL4A1-202ENST00000467182 SPATA12Q7Z6I5 190 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 Q8N976 141 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 DNAH7Q8WXX0 4024 aa9.03□□□□□ -0.96
COL4A1-202ENST00000467182 DEFB131BA0A096LNP1 70 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 A0A096LPF7 62 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 IGIPA6NJ69 53 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 ATP6V0E2Q8NHE4 81 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 HSPB8Q9UJY1 196 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 CYSLTR1Q9Y271 337 aa9.02□□□□□ -0.97
COL4A1-202ENST00000467182 TRAV10A0A0B4J240 114 aa9.01□□□□□ -0.97
COL4A1-202ENST00000467182 PYY3Q5JQD4 70 aa9.01□□□□□ -0.97
COL4A1-202ENST00000467182 FAM104AQ969W3 186 aa9.01□□□□□ -0.97
COL4A1-202ENST00000467182 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9□□□□□ -0.97
COL4A1-202ENST00000467182 IGKV2-29A2NJV5 120 aaPredicted RBP9□□□□□ -0.97
COL4A1-202ENST00000467182 G0S2P27469 103 aa9□□□□□ -0.97
COL4A1-202ENST00000467182 KRTDAPP60985 99 aa9□□□□□ -0.97
COL4A1-202ENST00000467182 JOSD1Q15040 202 aaPredicted RBP9□□□□□ -0.97
COL4A1-202ENST00000467182 ERASQ7Z444 233 aa9□□□□□ -0.97
COL4A1-202ENST00000467182 IFI27L1Q96BM0 104 aa9□□□□□ -0.97
COL4A1-202ENST00000467182 ICOSQ9Y6W8 199 aa9□□□□□ -0.97
COL4A1-202ENST00000467182 TRBV6-8A0A0A6YYG3 113 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 LINC01549A6NIU2 74 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 SYS1-DBNDD2H3BUS1 97 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 MRPL23Q16540 153 aaKnown RBP8.99□□□□□ -0.97
COL4A1-202ENST00000467182 SCGB3A1Q96QR1 104 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 TIMM17AQ99595 171 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 UBE2D4Q9Y2X8 147 aa8.99□□□□□ -0.97
COL4A1-202ENST00000467182 ATP5LO75964 103 aa8.98□□□□□ -0.97
COL4A1-202ENST00000467182 TMEM97Q5BJF2 176 aa8.98□□□□□ -0.97
COL4A1-202ENST00000467182 MAP1LC3CQ9BXW4 147 aa8.98□□□□□ -0.97
COL4A1-202ENST00000467182 PYGO1Q9Y3Y4 419 aa8.98□□□□□ -0.97
COL4A1-202ENST00000467182 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.97□□□□□ -0.97
COL4A1-202ENST00000467182 PLECQ15149 4684 aaKnown RBP8.97□□□□□ -0.97
COL4A1-202ENST00000467182 CDPF1Q6NVV7 123 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 CEMP1Q6PRD7 247 aaPredicted RBP8.97□□□□□ -0.97
COL4A1-202ENST00000467182 PET117Q6UWS5 81 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 SH2D6Q7Z4S9 175 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 BAALCQ8WXS3 180 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 TMEM141Q96I45 108 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 OPRPNQ99935 248 aaPredicted RBP8.97□□□□□ -0.97
COL4A1-202ENST00000467182 TMEM243Q9BU79 118 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 TIMM21Q9BVV7 248 aa8.97□□□□□ -0.97
COL4A1-202ENST00000467182 IGLV4-3A0A075B6K6 122 aa8.96□□□□□ -0.98
COL4A1-202ENST00000467182 TRBV25-1A0A075B6N4 114 aa8.96□□□□□ -0.98
COL4A1-202ENST00000467182 TIRAPP58753 221 aa8.96□□□□□ -0.98
COL4A1-202ENST00000467182 LINC01545Q5VT33 79 aa8.96□□□□□ -0.98
COL4A1-202ENST00000467182 MRPL52Q86TS9 123 aaKnown RBP8.96□□□□□ -0.98
COL4A1-202ENST00000467182 SPANXA1Q9NS26 97 aa8.96□□□□□ -0.98
COL4A1-202ENST00000467182 H7C423 109 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 NPSP0C0P6 89 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 SMIM6P0DI80 62 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 FGF6P10767 208 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 ZC2HC1BQ5TFG8 222 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 LYPD5Q6UWN5 251 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 STARD9Q9P2P6 4700 aa8.95□□□□□ -0.98
COL4A1-202ENST00000467182 STAB2Q8WWQ8 2551 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 TRAV12-1A0A0B4J245 112 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 H0Y8G0 127 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 SCGB1D1O95968 90 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 ODF1Q14990 250 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 LELP1Q5T871 98 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 LGALS9CQ6DKI2 356 aa8.94□□□□□ -0.98
COL4A1-202ENST00000467182 CSDC2Q9Y534 153 aaKnown RBP8.94□□□□□ -0.98
COL4A1-202ENST00000467182 FBN3Q75N90 2809 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 CSMD3Q7Z407 3707 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 MRPS36P82909 103 aaKnown RBP8.93□□□□□ -0.98
COL4A1-202ENST00000467182 GAGE6Q13070 117 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 Q6ZN92 141 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 Q6ZUT4 128 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 LINC00518Q8N0U6 118 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 AMELXQ99217 191 aa8.93□□□□□ -0.98
COL4A1-202ENST00000467182 A0A087WX48 190 aa8.92□□□□□ -0.98
COL4A1-202ENST00000467182 PRSS29PA6NIE9 313 aa8.92□□□□□ -0.98
COL4A1-202ENST00000467182 PRSS1P07477 247 aa8.92□□□□□ -0.98
COL4A1-202ENST00000467182 ESRGQ1W209 222 aa8.92□□□□□ -0.98
COL4A1-202ENST00000467182 C15orf53Q8NAA6 179 aa8.92□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 72.6 ms