RNA–Protein interactions for RNA: ENST00000467171.2

APOBEC1-202, Transcript of apolipoprotein B mRNA editing enzyme catalytic subunit 1, humanhuman

TSL 1 (best)

Gene APOBEC1, Length 861 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APOBEC1-202ENST00000467171 PMCHL2Q9BQD1 86 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 X6R8D5 127 aa6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 NIPBLQ6KC79 2804 aaeCLIP6.81□□□□□ -1.32
APOBEC1-202ENST00000467171 TENM1Q9UKZ4 2725 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 hDV102S1A0JD36 115 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 A8MZ25 164 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 DPM2O94777 84 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 NPSP0C0P6 89 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 P0DMU3 169 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 FAM231AP0DMU4 169 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 FAM231CP0DMU5 169 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 DKK2Q9UBU2 259 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 TP53TG1Q9Y2A0 90 aa6.8□□□□□ -1.32
APOBEC1-202ENST00000467171 TRBV7-3A0A075B6L6 115 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 TRBV6-4A0A1B0GX49 114 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 GAGE12BA1L429 117 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 K7EQD1 137 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 GAGE7O76087 117 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 IGKCP01834 107 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 GAGE12FP0CL80 117 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 GAGE12GP0CL81 117 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 GAGE12IP0CL82 117 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 PLNP26678 52 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 BAALCQ8WXS3 180 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 C14orf144Q96I85 54 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 PYGO1Q9Y3Y4 419 aa6.79□□□□□ -1.32
APOBEC1-202ENST00000467171 TRGV2A0A075B6R0 118 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 PRSS29PA6NIE9 313 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 LYRM9A8MSI8 78 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 F8VRH5 84 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 H3BS24 57 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 IGHV4-30-4P0DP06 118 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 CRYBA4P53673 196 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 RPL36AP83881 106 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 DAZ4Q86SG3 579 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 RPL36ALQ969Q0 106 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 DAZ3Q9NR90 486 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 MRPL35Q9NZE8 188 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 HHLA3Q9XRX5 114 aa6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 MRPS16Q9Y3D3 137 aaKnown RBP6.78□□□□□ -1.32
APOBEC1-202ENST00000467171 COX8AP10176 69 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 MIFP14174 115 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 UBE2D3P61077 147 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 UBE2D2P62837 147 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 RPL39P62891 51 aaKnown RBP6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 COTL1Q14019 142 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 FHL2Q14192 279 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 PMVKQ15126 192 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 ANKRD39Q53RE8 183 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 PAPPA-AS1Q5QFB9 102 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 SLC25A34Q6PIV7 304 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 SLC25A29Q8N8R3 303 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 RNF183Q96D59 192 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 CHCHD7Q9BUK0 85 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 Q9UF83 564 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 CHTOPQ9Y3Y2 248 aaKnown RBP6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 VWFP04275 2813 aa6.77□□□□□ -1.33
APOBEC1-202ENST00000467171 TRRAPQ9Y4A5 3859 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 DLEU1O43261 78 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 KRTAP10-11P60412 298 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 LBHQ53QV2 105 aaPredicted RBP6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 STPG4Q8N801 248 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 ZNRF2Q8NHG8 242 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 CST9LQ9H4G1 147 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 SPANXA1Q9NS26 97 aa6.76□□□□□ -1.33
APOBEC1-202ENST00000467171 TRGV4A0A0C4DH28 118 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 HNRNPA3P51991 378 aaKnown RBP6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 DEFB135Q30KP9 77 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 OR11H2Q8NH07 326 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 PRADC1Q9BSG0 188 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 TIMM21Q9BVV7 248 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 GTSF1LQ9H1H1 148 aa6.75□□□□□ -1.33
APOBEC1-202ENST00000467171 IGHV4-28A0A0C4DH34 117 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 M0R143 59 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 LINC00694P0DN24 101 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 FGF6P10767 208 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 EMP1P54849 157 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 ZC2HC1BQ5TFG8 222 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 BOD1L2Q8IYS8 172 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 Q8NAQ8 132 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 AMELXQ99217 191 aa6.74□□□□□ -1.33
APOBEC1-202ENST00000467171 IGLV4-69A0A075B6H9 119 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 IGLV4-3A0A075B6K6 122 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 TEX48A0A1B0GUV7 120 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 GAGE12JA6NER3 117 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 SIVA1O15304 175 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 CTAG1AP78358 180 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 MRPS36P82909 103 aaKnown RBP6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 SMAGPQ0VAQ4 97 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 GAGE1Q13065 139 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 GAGE4Q13068 117 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 GAGE5Q13069 117 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 GAGE13Q4V321 117 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 TMEM97Q5BJF2 176 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 FAM222AQ5U5X8 452 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 NFE4Q86UQ8 179 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 DEFB104AQ8WTQ1 72 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 PHLDA1Q8WV24 401 aaPredicted RBP6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 FAM104AQ969W3 186 aa6.73□□□□□ -1.33
APOBEC1-202ENST00000467171 KRTAP4-2Q9BYR5 136 aa6.73□□□□□ -1.33
Retrieved 100 of 20,778 RNA–protein pairs in 48.3 ms