RNA–Protein interactions for RNA: ENST00000466781.5

HPS4-209, Transcript of HPS4, biogenesis of lysosomal organelles complex 3 subunit 2, humanhuman

TSL 1 (best)

Gene HPS4, Length 6,136 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HPS4-209ENST00000466781 C11orf71Q6IPW1 123 aa6.57□□□□□ -1.36
HPS4-209ENST00000466781 PRR15LQ9BU68 103 aa6.57□□□□□ -1.36
HPS4-209ENST00000466781 J3KT08 172 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 DEFB114Q30KQ6 69 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 C22orf34Q6ZV56 151 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 ODF3BA8MYP8 253 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 FXYD2P54710 66 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 LINC00482Q8N8I6 264 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 EML6Q6ZMW3 1958 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 LINC01548A6NM66 108 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 WFDC10BQ8IUB3 73 aa6.56□□□□□ -1.36
HPS4-209ENST00000466781 LINC00322Q6ZN03 302 aaPredicted RBP6.55□□□□□ -1.36
HPS4-209ENST00000466781 E7EUB6 86 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 LINC00467Q9BRT7 94 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 HRCT1Q6UXD1 115 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 C3orf22Q8N5N4 141 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 SPTBN2O15020 2390 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 ODF1Q14990 250 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 TRAV23DV6A0A075B6W5 121 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 SYCNQ0VAF6 134 aa6.54□□□□□ -1.36
HPS4-209ENST00000466781 SPTSSBQ8NFR3 76 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 SZT2Q5T011 3432 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 LRP4O75096 1905 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 C9orf85Q96MD7 179 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 ZNF407Q9C0G0 2248 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 ABCA1O95477 2261 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 A0A0J9YXY3 114 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 TEX49A0A1B0GTD5 131 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 SPINK6Q6UWN8 80 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 NEXN-AS1Q8NBZ9 246 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 IGF1P05019 195 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 Q6ZSV7 163 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 SPANXB1Q9NS25 103 aaPredicted RBP6.53□□□□□ -1.36
HPS4-209ENST00000466781 TTTY13Q9BZ97 58 aa6.53□□□□□ -1.36
HPS4-209ENST00000466781 DOCK11Q5JSL3 2073 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 K7EQG2 157 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 TRBV6-8A0A0A6YYG3 113 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 IGLV2-14P01704 120 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 UBE2D2P62837 147 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 BRK1Q8WUW1 75 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 DOCK7Q96N67 2140 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 WFDC2Q14508 124 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 SCXQ7RTU7 201 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 MBD6Q96DN6 1003 aa6.52□□□□□ -1.37
HPS4-209ENST00000466781 FSTL3O95633 263 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 PPDPFQ9H3Y8 114 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 PCDH15Q96QU1 1955 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 LOC107984640A0A0U1RRK4 108 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 C10orf142B7Z368 130 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 NCOR1O75376 2440 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 CFAP126Q5VTH2 177 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 C20orf173Q96LM9 149 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 IBA57-AS1B1ANH7 110 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 LY6LH3BQJ8 138 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 SERP1Q9Y6X1 66 aa6.51□□□□□ -1.37
HPS4-209ENST00000466781 A0A0J9YWU9 116 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 TRBV6-4A0A1B0GX49 114 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 C19orf71A6NCJ1 209 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 NUPR1O60356 82 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 LINC00643Q86TS7 51 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 DCANP1Q8TF63 244 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 BBC3Q96PG8 261 aaPredicted RBP6.5□□□□□ -1.37
HPS4-209ENST00000466781 XAGE1AQ9HD64 81 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 LINC00474Q9P2X8 69 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 IGKV2-28A0A075B6P5 120 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 PLAC8L1A1L4L8 177 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 IGKV2D-28P01615 120 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 DHRS4-AS1Q9P1J3 65 aa6.5□□□□□ -1.37
HPS4-209ENST00000466781 IGLV9-49A0A0B4J1Y8 123 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 SLPIP03973 132 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 ZNF80P51504 273 aaPredicted RBP6.49□□□□□ -1.37
HPS4-209ENST00000466781 KPRPQ5T749 579 aaPredicted RBP6.49□□□□□ -1.37
HPS4-209ENST00000466781 IGLV4-69A0A075B6H9 119 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 TCL1BO95988 128 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 MPLKIPQ8TAP9 179 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 COL6A6A6NMZ7 2263 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 NUPR2A6NF83 97 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 C1orf158Q8N1D5 194 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 TMEM223A0PJW6 202 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 SPATA12Q7Z6I5 190 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 PCNX2A6NKB5 2137 aa6.49□□□□□ -1.37
HPS4-209ENST00000466781 ATP5EP2Q5VTU8 51 aa6.48□□□□□ -1.37
HPS4-209ENST00000466781 M0R378 163 aa6.48□□□□□ -1.37
HPS4-209ENST00000466781 CEP250Q9BV73 2442 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 CDSNQ15517 529 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 COA6Q5JTJ3 125 aaKnown RBP6.47□□□□□ -1.37
HPS4-209ENST00000466781 ENHOQ6UWT2 76 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 SDIM1Q6ZPB5 146 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 CDKN2A-AS1Q9UH64 79 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 MYO15AQ9UKN7 3530 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 LELP1Q5T871 98 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 CDPF1Q6NVV7 123 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 ZNF702PQ9H963 129 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 FAM186AA6NE01 2351 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 IGLV4-3A0A075B6K6 122 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 C3orf84H3BNL1 204 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 C1orf229Q6ZS94 237 aaPredicted RBP6.47□□□□□ -1.37
HPS4-209ENST00000466781 CCKP06307 115 aa6.47□□□□□ -1.37
HPS4-209ENST00000466781 PIK3CD-AS1Q5SR53 167 aa6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 27.4 ms