RNA–Protein interactions for RNA: ENST00000466618.1

SNED1-208, Transcript of sushi, nidogen and EGF like domains 1, humanhuman

TSL 5

Gene SNED1, Length 2,198 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNED1-208ENST00000466618 COL6A5A8TX70 2615 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 IGHV3-35A0A0C4DH35 117 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 SPRY2O43597 315 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 IGHV3-11P01762 117 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 HERVK_113P61574 105 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 C18orf65Q6ZTR6 163 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 C15orf53Q8NAA6 179 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 TMEM263Q8WUH6 116 aaKnown RBP11.43□□□□□ -0.58
SNED1-208ENST00000466618 LINC01600Q96MT4 127 aa11.43□□□□□ -0.58
SNED1-208ENST00000466618 P0DMU3 169 aa11.42□□□□□ -0.58
SNED1-208ENST00000466618 FAM231AP0DMU4 169 aa11.42□□□□□ -0.58
SNED1-208ENST00000466618 FAM231CP0DMU5 169 aa11.42□□□□□ -0.58
SNED1-208ENST00000466618 RPL13AP40429 203 aaKnown RBP11.42□□□□□ -0.58
SNED1-208ENST00000466618 PRR9Q5T870 116 aa11.42□□□□□ -0.58
SNED1-208ENST00000466618 MDFICQ9P1T7 246 aa11.42□□□□□ -0.58
SNED1-208ENST00000466618 TRAV8-4A0A0B4J246 113 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 TEX49A0A1B0GTD5 131 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 A4D1N5 150 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 C4orf3Q8WVX3 66 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 BUB3O43684 328 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 CLEC3BP05452 202 aa11.41□□□□□ -0.58
SNED1-208ENST00000466618 TRBV12-3P01733 135 aa11.4□□□□□ -0.58
SNED1-208ENST00000466618 LINC01620Q4KN68 170 aa11.4□□□□□ -0.58
SNED1-208ENST00000466618 CLEC19AQ6UXS0 136 aa11.4□□□□□ -0.58
SNED1-208ENST00000466618 C14orf178Q8N769 122 aaPredicted RBP11.4□□□□□ -0.58
SNED1-208ENST00000466618 OR10J6PQ8NGY7 276 aa11.4□□□□□ -0.58
SNED1-208ENST00000466618 MEIG1Q5JSS6 88 aa11.4□□□□□ -0.59
SNED1-208ENST00000466618 PAPPA-AS1Q5QFB9 102 aa11.4□□□□□ -0.59
SNED1-208ENST00000466618 MDFIQ99750 246 aa11.4□□□□□ -0.59
SNED1-208ENST00000466618 DPH3P1Q9H4G8 78 aa11.4□□□□□ -0.59
SNED1-208ENST00000466618 ZFAND3Q9H8U3 227 aa11.4□□□□□ -0.59
SNED1-208ENST00000466618 M0R381 172 aa11.39□□□□□ -0.59
SNED1-208ENST00000466618 KHDC1LQ5JSQ8 128 aa11.39□□□□□ -0.59
SNED1-208ENST00000466618 A0A0B4J2C4 111 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 IGHV3-66A0A0C4DH42 116 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 IGIPA6NJ69 53 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 ATXN8Q156A1 80 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 C9orf47Q6ZRZ4 202 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 GPHB5Q86YW7 130 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 ZNRF2Q8NHG8 242 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 SPANXA1Q9NS26 97 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 ANK2Q01484 3957 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 H7C2G1 150 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 PMVKQ15126 192 aa11.38□□□□□ -0.59
SNED1-208ENST00000466618 A0A1W2PRX2 142 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 LGALS9O00182 355 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 TP53TG1Q9Y2A0 90 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 TRBV10-2A0A0K0K1G8 114 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 J3QQQ9 107 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 MGPP08493 103 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 ARL3P36405 182 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 DEFB136Q30KP8 78 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 TMEM170BQ5T4T1 132 aa11.37□□□□□ -0.59
SNED1-208ENST00000466618 IGHV4OR15-8A0A075B7B6 117 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 A0A087WW49 117 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 H3BMM0 161 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 SCGB2A1O75556 95 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 C3orf56Q8N813 242 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 UBE2WQ96B02 151 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 MRPL53Q96EL3 112 aaKnown RBP11.36□□□□□ -0.59
SNED1-208ENST00000466618 STAB1Q9NY15 2570 aa11.36□□□□□ -0.59
SNED1-208ENST00000466618 IGHV3OR16-13A0A075B7E8 117 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 IGHV3-74A0A0B4J1X5 117 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 TRAV2A0A0B4J234 112 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 NSUN5P1Q3KNT7 163 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 KRTAP21-3Q3LHN1 58 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 LINC01587Q99440 93 aa11.35□□□□□ -0.59
SNED1-208ENST00000466618 RPL39P62891 51 aaKnown RBP11.34□□□□□ -0.59
SNED1-208ENST00000466618 MUSTN1Q8IVN3 82 aa11.34□□□□□ -0.59
SNED1-208ENST00000466618 DUX3Q96PT4 197 aa11.34□□□□□ -0.59
SNED1-208ENST00000466618 LGALS3P17931 250 aaKnown RBP11.34□□□□□ -0.59
SNED1-208ENST00000466618 MRPL23Q16540 153 aaKnown RBP11.34□□□□□ -0.59
SNED1-208ENST00000466618 ZNF876PQ49A33 203 aa11.34□□□□□ -0.59
SNED1-208ENST00000466618 DEFB104AQ8WTQ1 72 aa11.34□□□□□ -0.59
SNED1-208ENST00000466618 CCL24O00175 119 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 CHCHD5Q9BSY4 110 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 PPDPFQ9H3Y8 114 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 J3KRW8 73 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 TRIAP1O43715 76 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 HOXD3P31249 432 aaPredicted RBP11.33□□□□□ -0.6
SNED1-208ENST00000466618 Q1RN00 199 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 POM121L12Q8N7R1 296 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 TIMM17AQ99595 171 aa11.33□□□□□ -0.6
SNED1-208ENST00000466618 VWFP04275 2813 aa11.32□□□□□ -0.6
SNED1-208ENST00000466618 TRBV30A0A0K0K1B3 111 aa11.32□□□□□ -0.6
SNED1-208ENST00000466618 TMEM141Q96I45 108 aa11.32□□□□□ -0.6
SNED1-208ENST00000466618 PHLDA3Q9Y5J5 127 aa11.32□□□□□ -0.6
SNED1-208ENST00000466618 IGHV3-49A0A0A0MS15 119 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 NDUFA4O00483 81 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 UNQ9165/PRO28630Q6UXU0 137 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 TRRAPQ9Y4A5 3859 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 PPP1R17O96001 155 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 SLURP1P55000 103 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 ZFAND2AQ8N6M9 145 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 TMEM126AQ9H061 195 aa11.31□□□□□ -0.6
SNED1-208ENST00000466618 H7C423 109 aa11.3□□□□□ -0.6
SNED1-208ENST00000466618 LEPROTO15243 131 aa11.3□□□□□ -0.6
SNED1-208ENST00000466618 S100A4P26447 101 aaKnown RBP11.3□□□□□ -0.6
SNED1-208ENST00000466618 POLR2KP53803 58 aaKnown RBP11.3□□□□□ -0.6
SNED1-208ENST00000466618 C2orf82Q6UX34 121 aa11.3□□□□□ -0.6
Retrieved 100 of 20,778 RNA–protein pairs in 54.5 ms