RNA–Protein interactions for RNA: ENST00000466260.1

RTFDC1-205, Transcript of Protein RTF2 homolog, humanhuman

TSL 3

Gene RTFDC1, Length 616 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-205ENST00000466260 CRIP1P50238 77 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 ESRGQ1W209 222 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 ZNF876PQ49A33 203 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 Q6ZN92 141 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 RASL10AQ92737 203 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 C9orf85Q96MD7 179 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 SNHG12Q9BXW3 62 aa6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 NXT2Q9NPJ8 142 aaKnown RBP6.75□□□□□ -1.33
RTFDC1-205ENST00000466260 IGHV1-24A0A0C4DH33 117 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 LOC100131303A0A0U1RQF7 123 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 LINC01549A6NIU2 74 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 TCAPO15273 167 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 PPP1R17O96001 155 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 IGLC6P0CF74 106 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 GYPEP15421 78 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 GAGE1Q13065 139 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 FAM19A2Q8N3H0 131 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 Q8N976 141 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 ZNRF2Q8NHG8 242 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 PRELID3AQ96N28 172 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 MAP1LC3AQ9H492 121 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 DNAH10Q8IVF4 4471 aa6.74□□□□□ -1.33
RTFDC1-205ENST00000466260 A0A1B0GV90 55 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 H3BNG1 76 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 K7EMI3 77 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 MED14OSP0DP75 135 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 G0S2P27469 103 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 CKS2P33552 79 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 LYZL1Q6UWQ5 148 aa6.73□□□□□ -1.33
RTFDC1-205ENST00000466260 NBDYA0A0U1RRE5 68 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 K7EQD1 137 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 M0R381 172 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 HBDP02042 147 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 TWIST1Q15672 202 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 MRPL23Q16540 153 aaKnown RBP6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 LINC01545Q5VT33 79 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 CFAP126Q5VTH2 177 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 SLC25A34Q6PIV7 304 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 Q6ZR54 194 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 TPPP3Q9BW30 176 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 Q9H8V8 135 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 JPT2Q9H910 190 aa6.72□□□□□ -1.33
RTFDC1-205ENST00000466260 PRSS29PA6NIE9 313 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 RTL8CO15255 209 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 RS1O15537 224 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 C1orf134Q5TEV5 83 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 FAM74A4Q5TZK3 123 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 NEGR1Q7Z3B1 354 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 PHLDA3Q9Y5J5 127 aa6.71□□□□□ -1.34
RTFDC1-205ENST00000466260 MUC21A0A0G2JKD1 596 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 MUC21A0A140T8X8 626 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 LINC01546A6NGU7 62 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 D6R8Y8 96 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 NXPH4O95158 308 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 GATA1P15976 413 aaPredicted RBP6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 SLC25A29Q8N8R3 303 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 SYT8Q8NBV8 401 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 MRAP2Q96G30 205 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 DNAH2Q9P225 4427 aa6.7□□□□□ -1.34
RTFDC1-205ENST00000466260 BIRC6Q9NR09 4857 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 PRSS47A8MTI9 375 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 A8MWV9 139 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 SIVA1O15304 175 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 ATP5LO75964 103 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 RHOHQ15669 191 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 MRPL51Q4U2R6 128 aaKnown RBP6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 LYPD5Q6UWN5 251 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 LINC00336Q6ZUF6 198 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 WFDC10BQ8IUB3 73 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 C6orf223Q8N319 242 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 URB1-AS1Q96HZ7 61 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 PRADC1Q9BSG0 188 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 UPK3BQ9BT76 320 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 KRTAP1-5Q9BYS1 174 aa6.69□□□□□ -1.34
RTFDC1-205ENST00000466260 A0A087WWL8 130 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 GAGE12JA6NER3 117 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 SNAI2O43623 268 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 GAGE4Q13068 117 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 GAGE5Q13069 117 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 GAGE13Q4V321 117 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 TTC32Q5I0X7 151 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 Q6ZSN1 163 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 ORAOV1Q8WV07 137 aa6.68□□□□□ -1.34
RTFDC1-205ENST00000466260 TRBV6-4A0A1B0GX49 114 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 DLEU1O43261 78 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 FCER1GP30273 86 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 SPANXN1Q5VSR9 72 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 AMN1Q8IY45 258 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 C14orf178Q8N769 122 aaPredicted RBP6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 Q8N8P6 123 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 PTH2Q96A98 100 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 IFI27L1Q96BM0 104 aa6.67□□□□□ -1.34
RTFDC1-205ENST00000466260 CIDEAO60543 219 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 COX8AP10176 69 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 ZNF25P17030 456 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 IFI27P40305 119 aaPredicted RBP6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 SEC11AP67812 179 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 ZNF56Q15929 161 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 BATFQ16520 125 aa6.66□□□□□ -1.34
RTFDC1-205ENST00000466260 ZNF575Q86XF7 245 aa6.66□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 73.2 ms