RNA–Protein interactions for RNA: ENST00000466171.1

CCDC93-205, Transcript of coiled-coil domain containing 93, humanhuman

TSL 3

Gene CCDC93, Length 477 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC93-205ENST00000466171 SSPOA2VEC9 5147 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 KIAA0100Q14667 2235 aaKnown RBP0.04□□□□□ -2.4
CCDC93-205ENST00000466171 TRAV22A0A0B4J277 110 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 A0A0D9SFI3 127 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 M0R135 149 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 SPINK8P0C7L1 97 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 HAMPP81172 84 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 SPAG11BQ08648 103 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 Q5VV11 94 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 C12orf73Q69YU5 71 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 Q6AWC8 147 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 SPAG11AQ6PDA7 123 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 V9GYH0 126 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 POLQO75417 2590 aa0.04□□□□□ -2.4
CCDC93-205ENST00000466171 PXDNQ92626 1479 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 SPAARA0A1B0GVQ0 90 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 HMGN1P05114 100 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 ZNF436-AS1Q8NC38 126 aaPredicted RBP0.03□□□□□ -2.4
CCDC93-205ENST00000466171 SMIM4Q8WVI0 70 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 SNRNP25Q9BV90 132 aaKnown RBP0.03□□□□□ -2.4
CCDC93-205ENST00000466171 CNFNQ9BYD5 112 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 NAA60Q9H7X0 242 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 LENEPQ9Y5L5 61 aa0.03□□□□□ -2.4
CCDC93-205ENST00000466171 PPIP5K1Q6PFW1 1433 aa0.03□□□□□ -2.41
CCDC93-205ENST00000466171 MYH8P13535 1937 aa0.03□□□□□ -2.41
CCDC93-205ENST00000466171 IGF2RP11717 2491 aa0.03□□□□□ -2.41
CCDC93-205ENST00000466171 NCOR2Q9Y618 2525 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 LOC100130705A0A1B0GUX0 176 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 M0R3E3 92 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 CATR1Q13166 79 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 Q56UQ5 140 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 TSLPQ969D9 159 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 CYP4F30PQ9H0H9 118 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 MYH9P35579 1960 aaKnown RBP0.02□□□□□ -2.41
CCDC93-205ENST00000466171 NAIPQ13075 1403 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 OTOGQ6ZRI0 2925 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 MBD5Q9P267 1494 aa0.02□□□□□ -2.41
CCDC93-205ENST00000466171 HRNRQ86YZ3 2850 aaPredicted RBP0.01□□□□□ -2.41
CCDC93-205ENST00000466171 BCE1O60756 84 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 S100A3P33764 101 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 TMEM170BQ5T4T1 132 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 SPCS1Q9Y6A9 102 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 CELSR2Q9HCU4 2923 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 ERCC6L2Q5T890 1561 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 BIVM-ERCC5R4GMW8 1640 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 PATJQ8NI35 1801 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 DOCK1Q14185 1865 aa0.01□□□□□ -2.41
CCDC93-205ENST00000466171 FXYD6-FXYD2A0A087WZ82 144 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 K7EP13 123 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 LRP6O75581 1613 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 APOC2P02655 101 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 CPSF1Q10570 1443 aaKnown RBP0□□□□□ -2.41
CCDC93-205ENST00000466171 WFDC2Q14508 124 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 NHSL1Q5SYE7 1610 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 FOCADQ5VW36 1801 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 PPP3R2Q96LZ3 170 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 NDUFA4L2Q9NRX3 87 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 ZNF236Q9UL36 1845 aa0□□□□□ -2.41
CCDC93-205ENST00000466171 DMBT1Q9UGM3 2413 aaPredicted RBP-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 F8P00451 2351 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 MYH7P12883 1935 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 ROCK2O75116 1388 aaKnown RBP-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 TRBV7-3A0A075B6L6 115 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 C10orf142B7Z368 130 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 F8VRH5 84 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 SNAPC5O75971 98 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 IFNGP01579 166 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 APOC3P02656 99 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 AKAIN1P0CW23 69 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 FGF7P21781 194 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 COX17Q14061 63 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 DEFB109BQ30KR1 87 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 BAGE2Q86Y30 109 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 Q8IZM0 81 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 MGST2Q99735 147 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 DYNLRB1Q9NP97 96 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 AHCTF1Q8WYP5 2266 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 DOCK2Q92608 1830 aa-0.01□□□□□ -2.41
CCDC93-205ENST00000466171 KTN1Q86UP2 1357 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 UQCR11O14957 56 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 BTG2P78543 158 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 C9orf153Q5TBE3 101 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 Q6JHZ5 121 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 RPL13AP3Q6NVV1 102 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 MRPL54Q6P161 138 aaKnown RBP-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 C5orf38Q86SI9 138 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 C8orf59Q8N0T1 100 aaPredicted RBP-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 C1orf54Q8WWF1 131 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 AMELXQ99217 191 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 SPANXDQ9BXN6 97 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 WNK3Q9BYP7 1800 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 KDM3BQ7LBC6 1761 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 LRRC37A2A6NM11 1700 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 KIF21AQ7Z4S6 1674 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 CACNA1CQ13936 2221 aa-0.02□□□□□ -2.41
CCDC93-205ENST00000466171 ASXL3Q9C0F0 2248 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 IGLC7A0M8Q6 106 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 OOSP1A8MZH6 123 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 HMGN4O00479 90 aa-0.03□□□□□ -2.41
CCDC93-205ENST00000466171 TPPP2P59282 170 aa-0.03□□□□□ -2.41
Retrieved 100 of 20,778 RNA–protein pairs in 34.5 ms