RNA–Protein interactions for RNA: ENST00000466017.1

VPS41-211, Transcript of VPS41, HOPS complex subunit, humanhuman

TSL 4

Gene VPS41, Length 591 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS41-211ENST00000466017 ST20Q9HBF5 79 aa3.85□□□□□ -1.79
VPS41-211ENST00000466017 PRO0255Q9UI72 69 aa3.85□□□□□ -1.79
VPS41-211ENST00000466017 TRBV7-3A0A075B6L6 115 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 SMKR1H3BMG3 65 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 K7EQD1 137 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 NUPR1O60356 82 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 SERF1AO75920 110 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 GAS8-AS1O95177 125 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 NCR2O95944 276 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 MGPP08493 103 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 FCER1GP30273 86 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 IFI27P40305 119 aaPredicted RBP3.84□□□□□ -1.79
VPS41-211ENST00000466017 CRYBA4P53673 196 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 DAD1P61803 113 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 RPL36AP83881 106 aaKnown RBP3.84□□□□□ -1.79
VPS41-211ENST00000466017 RHOHQ15669 191 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 ZNF56Q15929 161 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 ORMDL2Q53FV1 153 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 TMEM97Q5BJF2 176 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 FAM74A4Q5TZK3 123 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 FA2HQ7L5A8 372 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 DAZ4Q86SG3 579 aaKnown RBP3.84□□□□□ -1.79
VPS41-211ENST00000466017 HIST3H2BBQ8N257 126 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 SLC25A29Q8N8R3 303 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 NEXN-AS1Q8NBZ9 246 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 MRAPQ8TCY5 172 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 PRADC1Q9BSG0 188 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 TMEM70Q9BUB7 260 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 GTSF1LQ9H1H1 148 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 DAZ3Q9NR90 486 aaKnown RBP3.84□□□□□ -1.79
VPS41-211ENST00000466017 HHLA3Q9XRX5 114 aa3.84□□□□□ -1.79
VPS41-211ENST00000466017 TRAV26-2A0A0B4J265 109 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 TRGV4A0A0C4DH28 118 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 LOC105371267A0A1B0GV96 52 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 SDHAF1A6NFY7 115 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 I3L3M4 83 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 HSBP1O75506 76 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 LINC00694P0DN24 101 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 EMP1P54849 157 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 UBE2D3P61077 147 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 UBE2D2P62837 147 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 LAGE3Q14657 143 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 IQCJQ1A5X6 159 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 C12orf74Q32Q52 190 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 SH2D6Q7Z4S9 175 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 SVIPQ8NHG7 77 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 RPL39LQ96EH5 51 aaKnown RBP3.83□□□□□ -1.8
VPS41-211ENST00000466017 KIR2DL4Q99706 377 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 DNAH9Q9NYC9 4486 aa3.83□□□□□ -1.8
VPS41-211ENST00000466017 HUWE1Q7Z6Z7 4374 aaKnown RBP3.82□□□□□ -1.8
VPS41-211ENST00000466017 TRAV26-1A0A087WT03 109 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 IGLV5-39A0A0G2JS06 123 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 LOC389332A0A1B0GUA5 103 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 H7C423 109 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 PRB2P02812 416 aaPredicted RBP3.82□□□□□ -1.8
VPS41-211ENST00000466017 DEFB130BP0DP73 79 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 DEFB130AP0DP74 79 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 S100A2P29034 98 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 PDZD11Q5EBL8 140 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 ZNRF2Q8NHG8 242 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 C11orf45Q8TAV5 145 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 HIST1H2BLQ99880 126 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 CELA1Q9UNI1 258 aa3.82□□□□□ -1.8
VPS41-211ENST00000466017 A0A096LNJ9 63 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 IGHV3-73A0A0B4J1V6 119 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 A0A0J9YWU9 116 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 IFITM10A6NMD0 228 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 DEFB4AO15263 64 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 HBDP02042 147 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 P0DMU3 169 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 FAM231AP0DMU4 169 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 FAM231CP0DMU5 169 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 AMTP48728 403 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 DEFA6Q01524 100 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 COTL1Q14019 142 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 MRPL23Q16540 153 aaKnown RBP3.81□□□□□ -1.8
VPS41-211ENST00000466017 SPATA12Q7Z6I5 190 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 TOMM6Q96B49 74 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 VSIG2Q96IQ7 327 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 TIMM21Q9BVV7 248 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 RETNQ9HD89 108 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 HSPB8Q9UJY1 196 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 PYGO1Q9Y3Y4 419 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 CSDC2Q9Y534 153 aaKnown RBP3.81□□□□□ -1.8
VPS41-211ENST00000466017 DNHD1Q96M86 4753 aa3.81□□□□□ -1.8
VPS41-211ENST00000466017 TRAV10A0A0B4J240 114 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 IGHV1-24A0A0C4DH33 117 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 F5H768 121 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 ATP5LO75964 103 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 LEPROTL1O95214 131 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 TSHBP01222 138 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 AKR1D1P51857 326 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 SMAGPQ0VAQ4 97 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 RNASEKQ6P5S7 137 aaKnown RBP3.8□□□□□ -1.8
VPS41-211ENST00000466017 ERASQ7Z444 233 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 C20orf203Q8NBC4 194 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 ATP6V0E2Q8NHE4 81 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 TIMM17AQ99595 171 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 Q9UF83 564 aa3.8□□□□□ -1.8
VPS41-211ENST00000466017 TRBV6-8A0A0A6YYG3 113 aa3.79□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 74.8 ms