RNA–Protein interactions for RNA: ENST00000464187.1

COL5A1-205, Transcript of collagen type V alpha 1 chain, humanhuman

TSL 2

Gene COL5A1, Length 1,830 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL5A1-205ENST00000464187 IGHV3OR16-12A0A075B7B8 117 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 A6NDN8 102 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 A8MWV9 139 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 PTTG1IPP53801 180 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 KRTAP10-11P60412 298 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 PIK3CD-AS1Q5SR53 167 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 PTH2Q96A98 100 aa10.47□□□□□ -0.73
COL5A1-205ENST00000464187 I3L3M4 83 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 P0DMU3 169 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 FAM231AP0DMU4 169 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 FAM231CP0DMU5 169 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 PMVKQ15126 192 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 VAMP3Q15836 100 aa10.46□□□□□ -0.74
COL5A1-205ENST00000464187 G3V4G9 280 aa10.45□□□□□ -0.74
COL5A1-205ENST00000464187 CSNK1G2-AS1Q8NCQ2 148 aa10.45□□□□□ -0.74
COL5A1-205ENST00000464187 CST9LQ9H4G1 147 aa10.45□□□□□ -0.74
COL5A1-205ENST00000464187 C11orf86A6NJI1 115 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 E9PLD3 99 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 H3BRM9 83 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 CFAP126Q5VTH2 177 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 OR11H2Q8NH07 326 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 FXYD2P54710 66 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 SPXQ9BT56 116 aa10.44□□□□□ -0.74
COL5A1-205ENST00000464187 MRPL16Q9NX20 251 aaKnown RBP10.44□□□□□ -0.74
COL5A1-205ENST00000464187 K7EP13 123 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 IGHV4-30-4P0DP06 118 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 GCSHP23434 173 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 EMP1P54849 157 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 Q6ZSN1 163 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 C20orf203Q8NBC4 194 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 PRADC1Q9BSG0 188 aa10.43□□□□□ -0.74
COL5A1-205ENST00000464187 MYMXA0A1B0GTQ4 84 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 AZU1P20160 251 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 SAMD5Q5TGI4 173 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 PAPPA-AS1Q5QFB9 102 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 AMMECR1LQ6DCA0 310 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 IL17DQ8TAD2 202 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 OPRPNQ99935 248 aaPredicted RBP10.42□□□□□ -0.74
COL5A1-205ENST00000464187 Q9UF83 564 aa10.42□□□□□ -0.74
COL5A1-205ENST00000464187 C9orf118A6NHY6 69 aa10.41□□□□□ -0.74
COL5A1-205ENST00000464187 RS1O15537 224 aa10.41□□□□□ -0.74
COL5A1-205ENST00000464187 CEND1Q8N111 149 aa10.41□□□□□ -0.74
COL5A1-205ENST00000464187 KIR2DL5BQ8NHK3 375 aa10.41□□□□□ -0.74
COL5A1-205ENST00000464187 RHODO00212 210 aa10.4□□□□□ -0.74
COL5A1-205ENST00000464187 APOC4P55056 127 aa10.4□□□□□ -0.74
COL5A1-205ENST00000464187 ZNRF2Q8NHG8 242 aa10.4□□□□□ -0.74
COL5A1-205ENST00000464187 TM2D2Q9BX73 214 aa10.4□□□□□ -0.74
COL5A1-205ENST00000464187 TAL2Q16559 108 aa10.4□□□□□ -0.75
COL5A1-205ENST00000464187 RNASE8Q8TDE3 154 aaKnown RBP10.4□□□□□ -0.75
COL5A1-205ENST00000464187 TMEM263Q8WUH6 116 aaKnown RBP10.4□□□□□ -0.75
COL5A1-205ENST00000464187 TNFRSF18Q9Y5U5 241 aa10.4□□□□□ -0.75
COL5A1-205ENST00000464187 IGLV4-3A0A075B6K6 122 aa10.39□□□□□ -0.75
COL5A1-205ENST00000464187 TRBV7-3A0A075B6L6 115 aa10.39□□□□□ -0.75
COL5A1-205ENST00000464187 IGHV3-53P01767 116 aa10.39□□□□□ -0.75
COL5A1-205ENST00000464187 OR4C5Q8NGB2 326 aa10.39□□□□□ -0.75
COL5A1-205ENST00000464187 RAB37Q96AX2 223 aa10.39□□□□□ -0.75
COL5A1-205ENST00000464187 HERVK_113P61574 105 aa10.38□□□□□ -0.75
COL5A1-205ENST00000464187 NFE4Q86UQ8 179 aa10.38□□□□□ -0.75
COL5A1-205ENST00000464187 NAA38Q9BRA0 125 aaKnown RBP10.38□□□□□ -0.75
COL5A1-205ENST00000464187 ZNF815PA8K554 130 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 H3BUT2 72 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 SMIM13P0DJ93 91 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 RRN3P1Q2M238 152 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 K7ERJ3 54 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 DEFB135Q30KP9 77 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 TMEM170BQ5T4T1 132 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 FAM104AQ969W3 186 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 C16orf74Q96GX8 76 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 HIST1H4GQ99525 98 aa10.37□□□□□ -0.75
COL5A1-205ENST00000464187 A8MZ25 164 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 TSPEAR-AS2P59090 65 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 PHLDA1Q8WV24 401 aaPredicted RBP10.36□□□□□ -0.75
COL5A1-205ENST00000464187 PLEKHB2Q96CS7 222 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 DNAJC30Q96LL9 226 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 CHCHD7Q9BUK0 85 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 NHP2Q9NX24 153 aaKnown RBP10.36□□□□□ -0.75
COL5A1-205ENST00000464187 PYGO1Q9Y3Y4 419 aa10.36□□□□□ -0.75
COL5A1-205ENST00000464187 TRGV1A0A0A0MS02 117 aa10.35□□□□□ -0.75
COL5A1-205ENST00000464187 MGAM2Q2M2H8 2515 aa10.35□□□□□ -0.75
COL5A1-205ENST00000464187 PLAC8L1A1L4L8 177 aa10.35□□□□□ -0.75
COL5A1-205ENST00000464187 DNAH3Q8TD57 4116 aa10.35□□□□□ -0.75
COL5A1-205ENST00000464187 NOTCH1P46531 2555 aa10.34□□□□□ -0.75
COL5A1-205ENST00000464187 AMELXQ99217 191 aa10.34□□□□□ -0.75
COL5A1-205ENST00000464187 VCX2Q9H322 139 aa10.34□□□□□ -0.75
COL5A1-205ENST00000464187 X6R8D5 127 aa10.34□□□□□ -0.75
COL5A1-205ENST00000464187 IGHV3-38A0A0C4DH36 116 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 A0A1W2PPM0 123 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 ZNF22P17026 224 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-205ENST00000464187 CEMP1Q6PRD7 247 aaPredicted RBP10.33□□□□□ -0.76
COL5A1-205ENST00000464187 NBEAL2Q6ZNJ1 2754 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 NOP10Q9NPE3 64 aaKnown RBP10.33□□□□□ -0.76
COL5A1-205ENST00000464187 A0A0J9YXV3 536 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 TMEM223A0PJW6 202 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 GAGE10A6NGK3 116 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 DAZ2Q13117 558 aaKnown RBP10.33□□□□□ -0.76
COL5A1-205ENST00000464187 SCGB1D4Q6XE38 83 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 Q6ZTI0 123 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 ZNF479Q96JC4 524 aa10.33□□□□□ -0.76
COL5A1-205ENST00000464187 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.32□□□□□ -0.76
COL5A1-205ENST00000464187 IGKV2-29A2NJV5 120 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms