RNA–Protein interactions for RNA: ENST00000463753.5

COL8A1-205, Transcript of collagen type VIII alpha 1 chain, humanhuman

TSL 1 (best)

Gene COL8A1, Length 2,964 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL8A1-205ENST00000463753 INAFM2P0DMQ5 153 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 LINC00846Q9NV44 126 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 SPENQ96T58 3664 aaKnown RBP2.67□□□□□ -1.98
COL8A1-205ENST00000463753 ZFHX4Q86UP3 3567 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 PLXNB1O43157 2135 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 TRBV6-1A0A0K0K1D8 114 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 TRBV12-3P01733 135 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 CCL3P10147 92 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 RPL28P46779 137 aaKnown RBP2.67□□□□□ -1.98
COL8A1-205ENST00000463753 FAM229BQ4G0N7 80 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 PAPPA-AS1Q5QFB9 102 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 FAM201AQ5SY85 155 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 APRG1Q8IVJ8 170 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 OPRPNQ99935 248 aaPredicted RBP2.67□□□□□ -1.98
COL8A1-205ENST00000463753 HES7Q9BYE0 225 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 SDK2Q58EX2 2172 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 NACAE9PAV3 2078 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 A8MZ25 164 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 C3orf84H3BNL1 204 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 DAD1P61803 113 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 DEFB113Q30KQ7 82 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF491Q8N8L2 437 aa2.67□□□□□ -1.98
COL8A1-205ENST00000463753 NFAM1Q8NET5 270 aaPredicted RBP2.67□□□□□ -1.98
COL8A1-205ENST00000463753 CADP27708 2225 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV3OR16-8A0A075B7F1 116 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 EPM2AB3EWF7 344 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 LMO7DNF2Z398 122 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 LEPROTO15243 131 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 BUB3O43684 328 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 TSHBP01222 138 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 LHBP01229 141 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 FBXL19-AS1Q494R0 122 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 Q6JHZ5 121 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 ENHOQ6UWT2 76 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 KRTAP4-5Q9BYR2 181 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 TMEM14CQ9P0S9 112 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 RNF7Q9UBF6 113 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 UBE2D4Q9Y2X8 147 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 DOCK10Q96BY6 2186 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 TPRP12270 2363 aaKnown RBP2.66□□□□□ -1.98
COL8A1-205ENST00000463753 ASPMQ8IZT6 3477 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 IGLV3-32A0A0A0MS00 114 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 TMEM61Q8N0U2 210 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 MRPL53Q96EL3 112 aaKnown RBP2.66□□□□□ -1.98
COL8A1-205ENST00000463753 PDZD2O15018 2839 aa2.66□□□□□ -1.98
COL8A1-205ENST00000463753 PCNX1Q96RV3 2341 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 IGHV3-72A0A0B4J1Y9 119 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 LRCOL1A6NCL2 159 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 C9orf129Q5T035 196 aaKnown RBP2.65□□□□□ -1.98
COL8A1-205ENST00000463753 ZNF575Q86XF7 245 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 LY6G5BQ8NDX9 201 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 COPS9Q8WXC6 57 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 IMMP1LQ96LU5 166 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 DSCAMO60469 2012 aa2.65□□□□□ -1.98
COL8A1-205ENST00000463753 ABCA12Q86UK0 2595 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 IGKV3D-20A0A0C4DH25 116 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 A0A1W2PNU3 283 aaPredicted RBP2.65□□□□□ -1.99
COL8A1-205ENST00000463753 BUB1B-PAK6H3BSN5 160 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 DEFB133Q30KQ1 61 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 DEFB108BQ8NET1 73 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 CNFNQ9BYD5 112 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 Q9UF83 564 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 CREBBPQ92793 2442 aa2.65□□□□□ -1.99
COL8A1-205ENST00000463753 A0A0J9YXV3 536 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 KRTAP9-7A8MTY7 169 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 COX7A2LO14548 114 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 S100A4P26447 101 aaKnown RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 RPL27AP46776 148 aaKnown RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 GGNQ86UU5 652 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 Q8N2B8 174 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 LYPD1Q8N2G4 141 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 C11orf68Q9H3H3 251 aaKnown RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 RBM12B-AS1Q9P1G2 102 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 C11orf21Q9P2W6 132 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 NDUFA12Q9UI09 145 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 PTPRQQ9UMZ3 2332 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 USP9XQ93008 2570 aaPredicted RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 IGKV1D-17A0A075B6S4 117 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 TRAV21A0A0B4J279 112 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-35A0A0C4DH35 117 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 PLAC8L1A1L4L8 177 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 PRAC2D3DTV9 90 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 F5H697 171 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 H3BRN7 92 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 NCR3O14931 201 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 LY6G6DO95868 133 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 RFPL3SP0C7P2 107 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 IGHV3-30-3P0DP02 117 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 MRPS36P82909 103 aaKnown RBP2.64□□□□□ -1.99
COL8A1-205ENST00000463753 MIAQ16674 131 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 C17orf58Q2M2W7 97 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 PRR15Q8IV56 129 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 C6orf223Q8N319 242 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 FAM218AQ96MZ4 157 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 DMDP11532 3685 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 DNHD1Q96M86 4753 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 IGIPA6NJ69 53 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 APOC4P55056 127 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 ZNF876PQ49A33 203 aa2.64□□□□□ -1.99
COL8A1-205ENST00000463753 RNASE13Q5GAN3 156 aaKnown RBP2.64□□□□□ -1.99
Retrieved 100 of 20,778 RNA–protein pairs in 43.1 ms