RNA–Protein interactions for RNA: ENST00000463477.5

PTPRD-207, Transcript of protein tyrosine phosphatase, receptor type D, humanhuman

TSL 1 (best) BASIC

Gene PTPRD, Length 1,697 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRD-207ENST00000463477 UFSP1Q6NVU6 142 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 GTF2H5Q6ZYL4 71 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 TMEM61Q8N0U2 210 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 MAPKAPK5-AS1Q8N8E1 139 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 B9D2Q9BPU9 175 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 DNAH9Q9NYC9 4486 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 MYMXA0A1B0GTQ4 84 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 A8MWV9 139 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1A1P0DJD3 496 aaKnown RBP7.19□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1CP0DJD4 496 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1FQ15415 496 aaKnown RBP7.19□□□□□ -1.26
PTPRD-207ENST00000463477 CD300EQ496F6 205 aaPredicted RBP7.19□□□□□ -1.26
PTPRD-207ENST00000463477 FAM74A4Q5TZK3 123 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 DYNLRB2Q8TF09 96 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 TTTY13Q9BZ97 58 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 MAP6D1Q9H9H5 199 aa7.19□□□□□ -1.26
PTPRD-207ENST00000463477 IGLV4-69A0A075B6H9 119 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1BA6NDE4 496 aaKnown RBP7.18□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1EA6NEQ0 496 aaKnown RBP7.18□□□□□ -1.26
PTPRD-207ENST00000463477 C11orf86A6NJI1 115 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 KNCNA6PVL3 124 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 I3L3M4 83 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 M0R2P5 195 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 RBMY1DP0C7P1 496 aaKnown RBP7.18□□□□□ -1.26
PTPRD-207ENST00000463477 GCSHP23434 173 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 FXYD2P54710 66 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 HERVK_113P61574 105 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 ZNF415Q09FC8 603 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 NEGR1Q7Z3B1 354 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 PHLDA1Q8WV24 401 aaPredicted RBP7.18□□□□□ -1.26
PTPRD-207ENST00000463477 CST9LQ9H4G1 147 aa7.18□□□□□ -1.26
PTPRD-207ENST00000463477 TRBV7-3A0A075B6L6 115 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 A0A1W2PPM0 123 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 GAGE10A6NGK3 116 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 A8MZ25 164 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 K7EP34 96 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 CRYBA4P53673 196 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 NFE4Q86UQ8 179 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 C20orf203Q8NBC4 194 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 OR5A1Q8NGJ0 315 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 SPXQ9BT56 116 aa7.17□□□□□ -1.26
PTPRD-207ENST00000463477 A0A1B0GWB2 263 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 H3BUT2 72 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 RHODO00212 210 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 PRADC1Q9BSG0 188 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 INSP01308 110 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 NHLRC4P0CG21 123 aaPredicted RBP7.16□□□□□ -1.26
PTPRD-207ENST00000463477 P0DMU3 169 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 FAM231AP0DMU4 169 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 FAM231CP0DMU5 169 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 RPL39P62891 51 aaKnown RBP7.16□□□□□ -1.26
PTPRD-207ENST00000463477 PYGO1Q9Y3Y4 419 aa7.16□□□□□ -1.26
PTPRD-207ENST00000463477 CMC4P56277 68 aaPredicted RBP7.15□□□□□ -1.27
PTPRD-207ENST00000463477 C11orf72Q8NBR9 251 aa7.15□□□□□ -1.27
PTPRD-207ENST00000463477 DNAJC30Q96LL9 226 aa7.15□□□□□ -1.27
PTPRD-207ENST00000463477 C19orf73Q9NVV2 129 aa7.15□□□□□ -1.27
PTPRD-207ENST00000463477 COL7A1Q02388 2944 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 GAGE12BA1L429 117 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 IGHV4-30-4P0DP06 118 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 FABP2P12104 132 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 HIST1H4GQ99525 98 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 CBY1Q9Y3M2 126 aa7.14□□□□□ -1.27
PTPRD-207ENST00000463477 ZNF815PA8K554 130 aa7.13□□□□□ -1.27
PTPRD-207ENST00000463477 RNASE8Q8TDE3 154 aaKnown RBP7.13□□□□□ -1.27
PTPRD-207ENST00000463477 RAB37Q96AX2 223 aa7.13□□□□□ -1.27
PTPRD-207ENST00000463477 SPANXB1Q9NS25 103 aaPredicted RBP7.13□□□□□ -1.27
PTPRD-207ENST00000463477 NHP2Q9NX24 153 aaKnown RBP7.13□□□□□ -1.27
PTPRD-207ENST00000463477 TMEM238LA0A1B0GVL6 79 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 A6NJY4 79 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 RS1O15537 224 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 IGHV3-53P01767 116 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 C12orf74Q32Q52 190 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 ODF3L2Q3SX64 289 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 CFAP126Q5VTH2 177 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 SBSPONQ8IVN8 264 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 ZNRF2Q8NHG8 242 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 IL17DQ8TAD2 202 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 FAM110AQ9BQ89 295 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 SPCS1Q9Y6A9 102 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 IGLV4-3A0A075B6K6 122 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 AMELXQ99217 191 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 LINC01587Q99440 93 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 TNFRSF18Q9Y5U5 241 aa7.12□□□□□ -1.27
PTPRD-207ENST00000463477 IGLL5B9A064 214 aa7.11□□□□□ -1.27
PTPRD-207ENST00000463477 RBX1P62877 108 aa7.11□□□□□ -1.27
PTPRD-207ENST00000463477 OCIAD2Q56VL3 154 aa7.11□□□□□ -1.27
PTPRD-207ENST00000463477 HUWE1Q7Z6Z7 4374 aaKnown RBP7.11□□□□□ -1.27
PTPRD-207ENST00000463477 A0A0J9YY99 117 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 TMEM223A0PJW6 202 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 LEPROTO15243 131 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 UBE2D1P51668 147 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 SCGB1D4Q6XE38 83 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 STHQ8IWL8 128 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 SPANXA1Q9NS26 97 aa7.1□□□□□ -1.27
PTPRD-207ENST00000463477 J3QQQ9 107 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 MRPS36P82909 103 aaKnown RBP7.09□□□□□ -1.27
PTPRD-207ENST00000463477 RRN3P1Q2M238 152 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 TMEM170BQ5T4T1 132 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 SLC25A29Q8N8R3 303 aa7.09□□□□□ -1.27
PTPRD-207ENST00000463477 PLEKHB2Q96CS7 222 aa7.09□□□□□ -1.27
Retrieved 100 of 20,778 RNA–protein pairs in 50.9 ms