RNA–Protein interactions for RNA: ENST00000462267.1

APP-211, Transcript of amyloid beta precursor protein, humanhuman

TSL 2

Gene APP, Length 667 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APP-211ENST00000462267 ATP6V0CP27449 155 aa9.18□□□□□ -0.94
APP-211ENST00000462267 H2BFSP57053 126 aa9.18□□□□□ -0.94
APP-211ENST00000462267 UBE2G2P60604 165 aa9.18□□□□□ -0.94
APP-211ENST00000462267 SERF2P84101 59 aa9.18□□□□□ -0.94
APP-211ENST00000462267 LOC107984640A0A0U1RRK4 108 aa9.17□□□□□ -0.94
APP-211ENST00000462267 RPL13AP40429 203 aaKnown RBP9.17□□□□□ -0.94
APP-211ENST00000462267 NKX2-5P52952 324 aaPredicted RBP9.17□□□□□ -0.94
APP-211ENST00000462267 SYCNQ0VAF6 134 aa9.17□□□□□ -0.94
APP-211ENST00000462267 FOXI1Q12951 378 aa9.17□□□□□ -0.94
APP-211ENST00000462267 GAGE2BQ13066 116 aa9.17□□□□□ -0.94
APP-211ENST00000462267 LINC00526Q96FQ7 95 aa9.17□□□□□ -0.94
APP-211ENST00000462267 MARVELD1Q9BSK0 173 aa9.17□□□□□ -0.94
APP-211ENST00000462267 IGHV1-58A0A0C4DH39 117 aa9.16□□□□□ -0.94
APP-211ENST00000462267 FAM74A7A6NL05 159 aa9.16□□□□□ -0.94
APP-211ENST00000462267 UBE2D1P51668 147 aa9.16□□□□□ -0.94
APP-211ENST00000462267 SSTP61278 116 aa9.16□□□□□ -0.94
APP-211ENST00000462267 COTL1Q14019 142 aa9.16□□□□□ -0.94
APP-211ENST00000462267 TNFSF18Q9UNG2 199 aa9.16□□□□□ -0.94
APP-211ENST00000462267 KRTAP1-4P0C5Y4 121 aa9.15□□□□□ -0.94
APP-211ENST00000462267 C9orf116Q5BN46 136 aaPredicted RBP9.15□□□□□ -0.94
APP-211ENST00000462267 SUMO4Q6EEV6 95 aa9.15□□□□□ -0.94
APP-211ENST00000462267 ZNF561-AS1K7EIQ3 104 aa9.14□□□□□ -0.95
APP-211ENST00000462267 MGPP08493 103 aa9.14□□□□□ -0.95
APP-211ENST00000462267 RGS21Q2M5E4 152 aa9.14□□□□□ -0.95
APP-211ENST00000462267 RASL11AQ6T310 242 aa9.14□□□□□ -0.95
APP-211ENST00000462267 FGF6P10767 208 aa9.13□□□□□ -0.95
APP-211ENST00000462267 AMMECR1LQ6DCA0 310 aa9.13□□□□□ -0.95
APP-211ENST00000462267 TCEAL7Q9BRU2 100 aa9.13□□□□□ -0.95
APP-211ENST00000462267 NIT2Q9NQR4 276 aa9.13□□□□□ -0.95
APP-211ENST00000462267 EIF5AP63241 154 aaKnown RBP9.12□□□□□ -0.95
APP-211ENST00000462267 PHF5AQ7RTV0 110 aaKnown RBP9.12□□□□□ -0.95
APP-211ENST00000462267 ISOC2Q96AB3 205 aa9.12□□□□□ -0.95
APP-211ENST00000462267 SSNA1O43805 119 aa9.11□□□□□ -0.95
APP-211ENST00000462267 XCL1P47992 114 aa9.11□□□□□ -0.95
APP-211ENST00000462267 MUC17Q685J3 4493 aa9.1□□□□□ -0.95
APP-211ENST00000462267 CTXND1A0A1B0GTU2 59 aa9.1□□□□□ -0.95
APP-211ENST00000462267 AKR1C3P42330 323 aa9.1□□□□□ -0.95
APP-211ENST00000462267 CAMPP49913 170 aa9.1□□□□□ -0.95
APP-211ENST00000462267 ZNF726P1Q15940 193 aa9.1□□□□□ -0.95
APP-211ENST00000462267 RNASEKQ6P5S7 137 aaKnown RBP9.1□□□□□ -0.95
APP-211ENST00000462267 ALG5Q9Y673 324 aa9.1□□□□□ -0.95
APP-211ENST00000462267 A0A087WZ39 114 aa9.09□□□□□ -0.95
APP-211ENST00000462267 H7C423 109 aa9.09□□□□□ -0.95
APP-211ENST00000462267 APOMO95445 188 aa9.09□□□□□ -0.95
APP-211ENST00000462267 BCL2P10415 239 aa9.09□□□□□ -0.95
APP-211ENST00000462267 OR5A1Q8NGJ0 315 aa9.09□□□□□ -0.95
APP-211ENST00000462267 TSKUQ8WUA8 353 aa9.09□□□□□ -0.95
APP-211ENST00000462267 CARHSP1Q9Y2V2 147 aaKnown RBP9.09□□□□□ -0.95
APP-211ENST00000462267 CCL25O15444 150 aa9.08□□□□□ -0.96
APP-211ENST00000462267 FHITP49789 147 aa9.08□□□□□ -0.96
APP-211ENST00000462267 IGLV4-69A0A075B6H9 119 aa9.07□□□□□ -0.96
APP-211ENST00000462267 LINC00959A0A1B0GUT2 108 aa9.07□□□□□ -0.96
APP-211ENST00000462267 TSPAN13O95857 204 aa9.07□□□□□ -0.96
APP-211ENST00000462267 S100A9P06702 114 aaKnown RBP9.07□□□□□ -0.96
APP-211ENST00000462267 NUP35Q8NFH5 326 aa9.07□□□□□ -0.96
APP-211ENST00000462267 STOML3Q8TAV4 291 aa9.07□□□□□ -0.96
APP-211ENST00000462267 MLST8Q9BVC4 326 aa9.07□□□□□ -0.96
APP-211ENST00000462267 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.06□□□□□ -0.96
APP-211ENST00000462267 NTF3P20783 257 aa9.06□□□□□ -0.96
APP-211ENST00000462267 MEF2BQ02080 365 aaPredicted RBP9.06□□□□□ -0.96
APP-211ENST00000462267 CST9LP1Q5W188 147 aa9.06□□□□□ -0.96
APP-211ENST00000462267 NCR2O95944 276 aa9.05□□□□□ -0.96
APP-211ENST00000462267 ZNF25P17030 456 aaPredicted RBP9.05□□□□□ -0.96
APP-211ENST00000462267 RPL18AQ02543 176 aaKnown RBP9.05□□□□□ -0.96
APP-211ENST00000462267 CD164L2Q6UWJ8 174 aa9.05□□□□□ -0.96
APP-211ENST00000462267 BAGE2Q86Y30 109 aa9.05□□□□□ -0.96
APP-211ENST00000462267 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.04□□□□□ -0.96
APP-211ENST00000462267 IGKV2-29A2NJV5 120 aaPredicted RBP9.04□□□□□ -0.96
APP-211ENST00000462267 CAMK2N2Q96S95 79 aa9.04□□□□□ -0.96
APP-211ENST00000462267 TPPP3Q9BW30 176 aa9.04□□□□□ -0.96
APP-211ENST00000462267 TRGC1P0CF51 173 aa9.03□□□□□ -0.96
APP-211ENST00000462267 IGLC6P0CF74 106 aa9.03□□□□□ -0.96
APP-211ENST00000462267 SS18Q15532 418 aa9.03□□□□□ -0.96
APP-211ENST00000462267 Q6ZNX1 250 aa9.03□□□□□ -0.96
APP-211ENST00000462267 KRTAP11-1Q8IUC1 163 aa9.03□□□□□ -0.96
APP-211ENST00000462267 BTF3L4Q96K17 158 aa9.03□□□□□ -0.96
APP-211ENST00000462267 APCSP02743 223 aa9.02□□□□□ -0.97
APP-211ENST00000462267 TMEM101Q96IK0 257 aa9.02□□□□□ -0.97
APP-211ENST00000462267 C2orf48Q96LS8 159 aa9.02□□□□□ -0.97
APP-211ENST00000462267 CDIP1Q9H305 208 aa9.02□□□□□ -0.97
APP-211ENST00000462267 MAP1LC3B2A6NCE7 125 aa9.01□□□□□ -0.97
APP-211ENST00000462267 EIF5AL1Q6IS14 154 aaKnown RBP9.01□□□□□ -0.97
APP-211ENST00000462267 MAP1LC3BQ9GZQ8 125 aa9.01□□□□□ -0.97
APP-211ENST00000462267 F2Z2F3 143 aa9□□□□□ -0.97
APP-211ENST00000462267 MALP21145 153 aa9□□□□□ -0.97
APP-211ENST00000462267 RNF151Q2KHN1 245 aa9□□□□□ -0.97
APP-211ENST00000462267 AKR1C8PQ5T2L2 129 aa9□□□□□ -0.97
APP-211ENST00000462267 OR2D3Q8NGH3 330 aa9□□□□□ -0.97
APP-211ENST00000462267 BCL2L11O43521 198 aa8.99□□□□□ -0.97
APP-211ENST00000462267 GIPP09681 153 aaPredicted RBP8.99□□□□□ -0.97
APP-211ENST00000462267 ESDP10768 282 aa8.99□□□□□ -0.97
APP-211ENST00000462267 RPS20P60866 119 aaKnown RBP8.99□□□□□ -0.97
APP-211ENST00000462267 OPRPNQ99935 248 aaPredicted RBP8.99□□□□□ -0.97
APP-211ENST00000462267 RPP21Q9H633 154 aaKnown RBP8.99□□□□□ -0.97
APP-211ENST00000462267 hCG_2014768A0A024R1R8 64 aa8.98□□□□□ -0.97
APP-211ENST00000462267 COX7A2LO14548 114 aa8.98□□□□□ -0.97
APP-211ENST00000462267 LINC01547P58512 204 aaPredicted RBP8.98□□□□□ -0.97
APP-211ENST00000462267 TPRXLQ17RH7 258 aa8.98□□□□□ -0.97
APP-211ENST00000462267 RPL7L1Q6DKI1 246 aaKnown RBP8.98□□□□□ -0.97
APP-211ENST00000462267 BORCS7-ASMTA0A0B4J1R7 106 aa8.97□□□□□ -0.97
Retrieved 100 of 20,778 RNA–protein pairs in 67.2 ms