RNA–Protein interactions for RNA: ENST00000461383.1

VCL-203, Transcript of vinculin, humanhuman

TSL 2

Gene VCL, Length 268 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCL-203ENST00000461383 GOLGA3Q08378 1498 aa0.41□□□□□ -2.34
VCL-203ENST00000461383 WNK3Q9BYP7 1800 aa0.41□□□□□ -2.34
VCL-203ENST00000461383 SPAARA0A1B0GVQ0 90 aa0.4□□□□□ -2.35
VCL-203ENST00000461383 PIN1P1O15428 100 aa0.4□□□□□ -2.35
VCL-203ENST00000461383 CATR1Q13166 79 aa0.4□□□□□ -2.35
VCL-203ENST00000461383 CFAP126Q5VTH2 177 aa0.4□□□□□ -2.35
VCL-203ENST00000461383 PSME4Q14997 1843 aa0.4□□□□□ -2.35
VCL-203ENST00000461383 CTXND1A0A1B0GTU2 59 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 LOC100130705A0A1B0GUX0 176 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 SNAPC5O75971 98 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 SPINK1P00995 79 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 CCL18P55774 89 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 SPAG11BQ08648 103 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 Q5VV11 94 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 SPAG11AQ6PDA7 123 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 SSBP3-AS1Q7Z2R9 100 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 C8orf59Q8N0T1 100 aaPredicted RBP0.39□□□□□ -2.35
VCL-203ENST00000461383 MBD5Q9P267 1494 aa0.39□□□□□ -2.35
VCL-203ENST00000461383 PPIP5K1Q6PFW1 1433 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 ZMYM4Q5VZL5 1548 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 NALCNQ8IZF0 1738 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 PLXNB2O15031 1838 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 PLCE1Q9P212 2302 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 PXDNQ92626 1479 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 KTN1Q86UP2 1357 aaKnown RBP0.38□□□□□ -2.35
VCL-203ENST00000461383 ZNF815PA8K554 130 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 M0R135 149 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 Q5BKY6 102 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 MRPL54Q6P161 138 aaKnown RBP0.38□□□□□ -2.35
VCL-203ENST00000461383 SMIM4Q8WVI0 70 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 PP6455Q8WZ26 134 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 LENEPQ9Y5L5 61 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 V9GYH0 126 aa0.38□□□□□ -2.35
VCL-203ENST00000461383 A0A0D9SFI3 127 aa0.37□□□□□ -2.35
VCL-203ENST00000461383 G3V318 75 aa0.37□□□□□ -2.35
VCL-203ENST00000461383 CYP4F30PQ9H0H9 118 aa0.37□□□□□ -2.35
VCL-203ENST00000461383 SCN3BQ9NY72 215 aa0.37□□□□□ -2.35
VCL-203ENST00000461383 MRC1P22897 1456 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 POLQO75417 2590 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 A0A1B0GV90 55 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 DLEU1O43261 78 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 SPINK8P0C7L1 97 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 TPPP2P59282 170 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 ZNF609O15014 1411 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 CPSF1Q10570 1443 aaKnown RBP0.36□□□□□ -2.35
VCL-203ENST00000461383 ZNF236Q9UL36 1845 aa0.36□□□□□ -2.35
VCL-203ENST00000461383 SYNE1Q8NF91 8797 aaKnown RBP0.35□□□□□ -2.35
VCL-203ENST00000461383 SSSCA1O60232 199 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 S100A3P33764 101 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 C9orf153Q5TBE3 101 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 C5orf38Q86SI9 138 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 MYOZ3Q8TDC0 251 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 MGST2Q99735 147 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 SPANXDQ9BXN6 97 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 SBF2Q86WG5 1849 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 ZFYVE26Q68DK2 2539 aa0.35□□□□□ -2.35
VCL-203ENST00000461383 KDM3BQ7LBC6 1761 aa0.34□□□□□ -2.35
VCL-203ENST00000461383 CUL7Q14999 1698 aa0.34□□□□□ -2.35
VCL-203ENST00000461383 HAMPP81172 84 aa0.34□□□□□ -2.36
VCL-203ENST00000461383 COMMD6Q7Z4G1 85 aa0.34□□□□□ -2.36
VCL-203ENST00000461383 DYNLRB1Q9NP97 96 aa0.34□□□□□ -2.36
VCL-203ENST00000461383 FAM208BQ5VWN6 2430 aa0.34□□□□□ -2.36
VCL-203ENST00000461383 MUC5ACP98088 5654 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 SPTBN2O15020 2390 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 TRBV7-3A0A075B6L6 115 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 FAM24AA6NFZ4 105 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 PHGR1C9JFL3 82 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 TNFP01375 233 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 APOC3P02656 99 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 COX17Q14061 63 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 TMEM170BQ5T4T1 132 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 TSLPQ969D9 159 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 GNG8Q9UK08 70 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 A2ML1A8K2U0 1454 aa0.33□□□□□ -2.36
VCL-203ENST00000461383 EIF4G3O43432 1585 aaKnown RBP0.32□□□□□ -2.36
VCL-203ENST00000461383 OOSP1A8MZH6 123 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 F8VRH5 84 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 IFITM1P13164 125 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 S100A1P23297 94 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 BAGE2Q86Y30 109 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 SVBPQ8N300 66 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 NDUFA4L2Q9NRX3 87 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 PRO0255Q9UI72 69 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 BCL9LQ86UU0 1499 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 ROBO1Q9Y6N7 1651 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 PIEZO1Q92508 2521 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 LRRC37A2A6NM11 1700 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 FAT4Q6V0I7 4981 aa0.32□□□□□ -2.36
VCL-203ENST00000461383 CELSR2Q9HCU4 2923 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 SMG6Q86US8 1419 aaKnown RBP0.31□□□□□ -2.36
VCL-203ENST00000461383 KIF21AQ7Z4S6 1674 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 QRICH2Q9H0J4 1663 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 LOC285095A0A1B0GVY8 99 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 F6UZH7 168 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 GNG4P50150 75 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 MRPS10P82664 201 aaKnown RBP0.31□□□□□ -2.36
VCL-203ENST00000461383 TMEM203Q969S6 136 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 CNFNQ9BYD5 112 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 SPCS1Q9Y6A9 102 aa0.31□□□□□ -2.36
VCL-203ENST00000461383 KMT2DO14686 5537 aa0.31□□□□□ -2.36
Retrieved 100 of 20,778 RNA–protein pairs in 49.1 ms