RNA–Protein interactions for RNA: ENST00000460940.5

APTX-209, Transcript of aprataxin, humanhuman

TSL 1 (best)

Gene APTX, Length 1,874 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
APTX-209ENST00000460940 DEFB4AO15263 64 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 GNG5P63218 68 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 SYT8Q8NBV8 401 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 C11orf45Q8TAV5 145 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 IFI27L1Q96BM0 104 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 C20orf78Q9BR46 151 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 ANAPC13Q9BS18 74 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 SPANXA1Q9NS26 97 aa7.96□□□□□ -1.13
APTX-209ENST00000460940 NHP2Q9NX24 153 aaKnown RBP7.96□□□□□ -1.13
APTX-209ENST00000460940 TIMM8BQ9Y5J9 83 aaPredicted RBP7.96□□□□□ -1.13
APTX-209ENST00000460940 A0A1B0GWB2 263 aa7.96□□□□□ -1.14
APTX-209ENST00000460940 TMEM75Q8N9X5 138 aa7.96□□□□□ -1.14
APTX-209ENST00000460940 TRAV12-3A0A0B4J271 114 aa7.95□□□□□ -1.14
APTX-209ENST00000460940 MT-ATP8P03928 68 aa7.95□□□□□ -1.14
APTX-209ENST00000460940 C12orf74Q32Q52 190 aa7.95□□□□□ -1.14
APTX-209ENST00000460940 C16orf74Q96GX8 76 aa7.95□□□□□ -1.14
APTX-209ENST00000460940 LINC00467Q9BRT7 94 aa7.95□□□□□ -1.14
APTX-209ENST00000460940 EVI2AP22794 236 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 RNASE4P34096 147 aaKnown RBP7.94□□□□□ -1.14
APTX-209ENST00000460940 IFI27P40305 119 aaPredicted RBP7.94□□□□□ -1.14
APTX-209ENST00000460940 CASC10Q5T4H9 136 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 Q86TA4 180 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 TMEM263Q8WUH6 116 aaKnown RBP7.94□□□□□ -1.14
APTX-209ENST00000460940 TRBV25-1A0A075B6N4 114 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 TRAV8-1A0A0A6YYK1 113 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 LINC01546A6NGU7 62 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 SPART-AS1P0CW21 52 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 XGP55808 180 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 PRR9Q5T870 116 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 CFAP126Q5VTH2 177 aa7.94□□□□□ -1.14
APTX-209ENST00000460940 CSMD3Q7Z407 3707 aa7.93□□□□□ -1.14
APTX-209ENST00000460940 NUPR2A6NF83 97 aa7.93□□□□□ -1.14
APTX-209ENST00000460940 EMP1P54849 157 aa7.93□□□□□ -1.14
APTX-209ENST00000460940 NANOS2P60321 138 aaKnown RBP7.93□□□□□ -1.14
APTX-209ENST00000460940 ZFAND6Q6FIF0 208 aa7.93□□□□□ -1.14
APTX-209ENST00000460940 PPDPFLQ8WWR9 84 aa7.93□□□□□ -1.14
APTX-209ENST00000460940 LYRM9A8MSI8 78 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 IGLV2-11P01706 119 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 ARMS2P0C7Q2 107 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 PRELID3AQ96N28 172 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 DKK2Q9UBU2 259 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 CELA1Q9UNI1 258 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 CSDC2Q9Y534 153 aaKnown RBP7.92□□□□□ -1.14
APTX-209ENST00000460940 HTN1P15515 57 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 ANXA2RQ3ZCQ2 193 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 FAM222AQ5U5X8 452 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 ORMDL3Q8N138 153 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 HHLA3Q9XRX5 114 aa7.92□□□□□ -1.14
APTX-209ENST00000460940 IGHV1OR15-1A0A075B7D0 117 aa7.91□□□□□ -1.14
APTX-209ENST00000460940 IGKV2D-26A0A0A0MRZ7 120 aa7.91□□□□□ -1.14
APTX-209ENST00000460940 PLAC8L1A1L4L8 177 aa7.91□□□□□ -1.14
APTX-209ENST00000460940 TMEM262E9PQX1 116 aa7.91□□□□□ -1.14
APTX-209ENST00000460940 PRNTQ86SH4 94 aa7.91□□□□□ -1.14
APTX-209ENST00000460940 TRAV21A0A0B4J279 112 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 IGKCP01834 107 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 PRM2P04554 102 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 TCTAP57738 103 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 FAM104BQ5XKR9 115 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 CEMP1Q6PRD7 247 aaPredicted RBP7.9□□□□□ -1.14
APTX-209ENST00000460940 SGK494Q96LW2 274 aa7.9□□□□□ -1.14
APTX-209ENST00000460940 KLK5Q9Y337 293 aaPredicted RBP7.9□□□□□ -1.14
APTX-209ENST00000460940 STARD9Q9P2P6 4700 aa7.9□□□□□ -1.15
APTX-209ENST00000460940 TRAV10A0A0B4J240 114 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 B5MCH6 92 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 D6R8Y8 96 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 ATP5LO75964 103 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 SMCPP49901 116 aaPredicted RBP7.89□□□□□ -1.15
APTX-209ENST00000460940 Q6ZTC4 211 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 TRBV7-3A0A075B6L6 115 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 DPM2O94777 84 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 DAD1P61803 113 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 DAZ2Q13117 558 aaKnown RBP7.89□□□□□ -1.15
APTX-209ENST00000460940 TWIST1Q15672 202 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 LYRM7Q5U5X0 104 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 FAM159AQ6UWV7 190 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 NFE4Q86UQ8 179 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 TEN1Q86WV5 123 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 TENM2Q9NT68 2774 aa7.89□□□□□ -1.15
APTX-209ENST00000460940 TRGV11A0A075B6L2 103 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 A0A087WX48 190 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 PRSS29PA6NIE9 313 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 RHODO00212 210 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 Q6Q795 121 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 COX8CQ7Z4L0 72 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 C11orf72Q8NBR9 251 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 C8orf49Q96NF6 230 aa7.88□□□□□ -1.15
APTX-209ENST00000460940 DYNC2H1Q8NCM8 4307 aaKnown RBP7.88□□□□□ -1.15
APTX-209ENST00000460940 LOC389332A0A1B0GUA5 103 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE12JA6NER3 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE7O76087 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE12FP0CL80 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE12GP0CL81 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE12IP0CL82 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 ZNF415Q09FC8 603 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 GAGE4Q13068 117 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 Q6ZQT7 251 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 NOP10Q9NPE3 64 aaKnown RBP7.87□□□□□ -1.15
APTX-209ENST00000460940 FCER1GP30273 86 aa7.87□□□□□ -1.15
APTX-209ENST00000460940 MRPL51Q4U2R6 128 aaKnown RBP7.87□□□□□ -1.15
APTX-209ENST00000460940 LINC00612Q8N6U2 182 aa7.87□□□□□ -1.15
Retrieved 100 of 20,778 RNA–protein pairs in 80.1 ms