RNA–Protein interactions for RNA: ENST00000460739.5

SOX2-OT-201, SOX2 overlapping transcript, humanhuman

TSL 4 BASIC

Gene SOX2-OT, Length 609 nt, Biotype sense overlapping.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX2-OT-201ENST00000460739 KRTAP10-4P60372 401 aaPredicted RBP7.64□□□□□ -1.19
SOX2-OT-201ENST00000460739 ALKAL2Q6UX46 152 aa7.64□□□□□ -1.19
SOX2-OT-201ENST00000460739 GATD1Q8NB37 220 aa7.64□□□□□ -1.19
SOX2-OT-201ENST00000460739 GTSF1Q8WW33 167 aa7.64□□□□□ -1.19
SOX2-OT-201ENST00000460739 IGLV4-60A0A075B6I1 120 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 IGLV10-54A0A075B6I4 117 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 COTL1Q14019 142 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 FAM231DQ6ZW35 169 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 C9orf163Q8N9P6 203 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 DEFB104AQ8WTQ1 72 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 GFRA4Q9GZZ7 299 aa7.63□□□□□ -1.19
SOX2-OT-201ENST00000460739 TRAV26-2A0A0B4J265 109 aa7.62□□□□□ -1.19
SOX2-OT-201ENST00000460739 AMTP48728 403 aa7.62□□□□□ -1.19
SOX2-OT-201ENST00000460739 CLRN3Q8NCR9 226 aa7.62□□□□□ -1.19
SOX2-OT-201ENST00000460739 KRTAP29-1A8MX34 341 aaPredicted RBP7.61□□□□□ -1.19
SOX2-OT-201ENST00000460739 UBE2L6O14933 153 aa7.61□□□□□ -1.19
SOX2-OT-201ENST00000460739 GATCO43716 136 aaKnown RBP7.61□□□□□ -1.19
SOX2-OT-201ENST00000460739 TEX261Q6UWH6 196 aa7.61□□□□□ -1.19
SOX2-OT-201ENST00000460739 SMIM15Q7Z3B0 74 aa7.61□□□□□ -1.19
SOX2-OT-201ENST00000460739 hCG_2014768A0A024R1R8 64 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 A8MWL6 223 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 J3QL48 77 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 NDUFS6O75380 124 aaKnown RBP7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 FOXA3P55318 350 aaPredicted RBP7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 CNBPP62633 177 aaKnown RBP7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 CT83Q5H943 113 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 SDIM1Q6ZPB5 146 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 RPL39LQ96EH5 51 aaKnown RBP7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 PKHD1L1Q86WI1 4243 aa7.6□□□□□ -1.19
SOX2-OT-201ENST00000460739 NCR2O95944 276 aa7.59□□□□□ -1.19
SOX2-OT-201ENST00000460739 hDV102S1A0JD36 115 aa7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 SDHAF1A6NFY7 115 aa7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 H7C423 109 aa7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 CEBPGP53567 150 aa7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 SMIM7Q9BQ49 75 aa7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 EIF5A2Q9GZV4 153 aaKnown RBP7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP7.58□□□□□ -1.2
SOX2-OT-201ENST00000460739 TRBV6-5A0A0K0K1A5 114 aa7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 PANO1I0J062 215 aa7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 APCSP02743 223 aa7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 CIRBPQ14011 172 aaKnown RBP7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 LINC01551Q86U37 167 aa7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 FAM210AQ96ND0 272 aa7.57□□□□□ -1.2
SOX2-OT-201ENST00000460739 TRAV16A0A0A6YYK6 109 aaPredicted RBP7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 FAM231BA6NCW3 169 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 I3L3M4 83 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 SLPIP03973 132 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 AMMECR1LQ6DCA0 310 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 C15orf56Q8N910 161 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 TSKUQ8WUA8 353 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 BORCS7Q96B45 105 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 OSTCQ9NRP0 149 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 AP5S1Q9NUS5 200 aa7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 LRP1Q07954 4544 aaKnown RBP7.56□□□□□ -1.2
SOX2-OT-201ENST00000460739 IGHV3-64A0A075B6Q5 118 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 A0A1B0GUT8 65 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 IGKV2-29A2NJV5 120 aaPredicted RBP7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 GAGE12HA6NDE8 117 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 ZNF727A8MUV8 499 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 HIGD1CA8MV81 97 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 SRP19P09132 144 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 FGF6P10767 208 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 RPL37AP61513 92 aaKnown RBP7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 TMEM191AQ9H0A3 160 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 FAT3Q8TDW7 4589 aa7.55□□□□□ -1.2
SOX2-OT-201ENST00000460739 IGKV3OR2-268A0A0C4DH90 116 aa7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 GAS8-AS1O95177 125 aa7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 OXTP01178 125 aa7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 ZNF25P17030 456 aaPredicted RBP7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 PMCHP20382 165 aa7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 RNASEKQ6P5S7 137 aaKnown RBP7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 CFAP161Q6P656 301 aa7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 CHCHD10Q8WYQ3 142 aaPredicted RBP7.54□□□□□ -1.2
SOX2-OT-201ENST00000460739 TSHBP01222 138 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 ESDP10768 282 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 RAB4AP20338 218 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 RNF185Q96GF1 192 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 ST20Q9HBF5 79 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 V9GYV3 84 aa7.53□□□□□ -1.2
SOX2-OT-201ENST00000460739 TRBV27A0A0K0K1C4 114 aa7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 RPS10P46783 165 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 POLR2KP53803 58 aaKnown RBP7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 OR5A1Q8NGJ0 315 aa7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 MRAP2Q96G30 205 aa7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 TMEM101Q96IK0 257 aa7.52□□□□□ -1.21
SOX2-OT-201ENST00000460739 GVQW2A0A096LPI5 108 aaPredicted RBP7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 CHTF8P0CG12 524 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 HNRNPA3P51991 378 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 FOXI1Q12951 378 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 TMEM241Q24JQ0 296 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 FAM74A3Q4VXF1 159 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 MRPL52Q86TS9 123 aaKnown RBP7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 AMN1Q8IY45 258 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 NUP35Q8NFH5 326 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 SPACA4Q8TDM5 124 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 ISOC2Q96AB3 205 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 BTF3L4Q96K17 158 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 TMEM242Q9NWH2 141 aa7.51□□□□□ -1.21
SOX2-OT-201ENST00000460739 A0A087WYN8 130 aa7.5□□□□□ -1.21
Retrieved 100 of 20,778 RNA–protein pairs in 46.7 ms