RNA–Protein interactions for RNA: ENST00000460428.5

SFPQ-202, Transcript of splicing factor proline and glutamine rich, humanhuman

TSL 2

Gene SFPQ, Length 464 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SFPQ-202ENST00000460428 IGHV4-30-4P0DP06 118 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 FGF6P10767 208 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 MIFP14174 115 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 RPL39P62891 51 aaKnown RBP5.71□□□□□ -1.5
SFPQ-202ENST00000460428 RPL36AP83881 106 aaKnown RBP5.71□□□□□ -1.5
SFPQ-202ENST00000460428 SLC25A34Q6PIV7 304 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 RPL36ALQ969Q0 106 aaKnown RBP5.71□□□□□ -1.5
SFPQ-202ENST00000460428 FAM104AQ969W3 186 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 AMELXQ99217 191 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 GTSF1LQ9H1H1 148 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 CST9LQ9H4G1 147 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 SPANXA1Q9NS26 97 aa5.71□□□□□ -1.5
SFPQ-202ENST00000460428 CHTOPQ9Y3Y2 248 aaKnown RBP5.71□□□□□ -1.5
SFPQ-202ENST00000460428 BAHCC1Q9P281 2608 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 IGLV4-69A0A075B6H9 119 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 TRGV2A0A075B6R0 118 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE12BA1L429 117 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 H7C423 109 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 M0R143 59 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE7O76087 117 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE12FP0CL80 117 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE12GP0CL81 117 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE12IP0CL82 117 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 KRTAP10-11P60412 298 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 MRPS36P82909 103 aaKnown RBP5.7□□□□□ -1.5
SFPQ-202ENST00000460428 COTL1Q14019 142 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 NFE4Q86UQ8 179 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 SBSPONQ8IVN8 264 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 STPG4Q8N801 248 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 ZNRF2Q8NHG8 242 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 C2orf88Q9BSF0 95 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 UBE2D4Q9Y2X8 147 aa5.7□□□□□ -1.5
SFPQ-202ENST00000460428 CSDC2Q9Y534 153 aaKnown RBP5.7□□□□□ -1.5
SFPQ-202ENST00000460428 IGLV4-3A0A075B6K6 122 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 HNRNPA3P51991 378 aaKnown RBP5.69□□□□□ -1.5
SFPQ-202ENST00000460428 OXLD1Q5BKU9 147 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 ZC2HC1BQ5TFG8 222 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 SAMD5Q5TGI4 173 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 Q8NAQ8 132 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 OR11H2Q8NH07 326 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 SNHG12Q9BXW3 62 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 CMYA5Q8N3K9 4069 aa5.69□□□□□ -1.5
SFPQ-202ENST00000460428 TENM1Q9UKZ4 2725 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 E9PLD3 99 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 DEFB135Q30KP9 77 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 TMEM97Q5BJF2 176 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 C2orf91Q6ZV80 131 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 FAM19A3Q7Z5A8 133 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 PRADC1Q9BSG0 188 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 HIGD1BQ9P298 99 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 TRRAPQ9Y4A5 3859 aa5.68□□□□□ -1.5
SFPQ-202ENST00000460428 IGKV2D-26A0A0A0MRZ7 120 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 TRGV4A0A0C4DH28 118 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 IGHV4-28A0A0C4DH34 117 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 TEX48A0A1B0GUV7 120 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 C11orf86A6NJI1 115 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 SMAGPQ0VAQ4 97 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 NTM-AS1Q6ZSK4 140 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 VCX2Q9H322 139 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 PRO0255Q9UI72 69 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 DNAH3Q8TD57 4116 aa5.67□□□□□ -1.5
SFPQ-202ENST00000460428 ATRQ13535 2644 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 IGHV3-38A0A0C4DH36 116 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE12JA6NER3 117 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 EREGO14944 169 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE1Q13065 139 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE4Q13068 117 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE5Q13069 117 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 GAGE13Q4V321 117 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 FAM222AQ5U5X8 452 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 PHLDA1Q8WV24 401 aaPredicted RBP5.66□□□□□ -1.5
SFPQ-202ENST00000460428 OPRPNQ99935 248 aaPredicted RBP5.66□□□□□ -1.5
SFPQ-202ENST00000460428 NIPBLQ6KC79 2804 aaeCLIP5.66□□□□□ -1.5
SFPQ-202ENST00000460428 VWFP04275 2813 aa5.66□□□□□ -1.5
SFPQ-202ENST00000460428 JMJD1CQ15652 2540 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 SPART-AS1P0CW21 52 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 DEFB130BP0DP73 79 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 DEFB130AP0DP74 79 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 EMP1P54849 157 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 TIRAPP58753 221 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 PCP2Q8IVA1 136 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 DEFB104AQ8WTQ1 72 aa5.65□□□□□ -1.5
SFPQ-202ENST00000460428 FBN1P35555 2871 aaKnown RBP5.65□□□□□ -1.51
SFPQ-202ENST00000460428 IGKV2D-29A0A075B6S2 120 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-202ENST00000460428 IGLV5-45A0A087WSX0 123 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 TRBV6-8A0A0A6YYG3 113 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 TINCRA0A1B0GVN0 87 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 TMEM223A0PJW6 202 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 IGKV2-29A2NJV5 120 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-202ENST00000460428 ZNF25P17030 456 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-202ENST00000460428 NMUP48645 174 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 KPRPQ5T749 579 aaPredicted RBP5.64□□□□□ -1.51
SFPQ-202ENST00000460428 CDC42SE2Q9NRR3 84 aa5.64□□□□□ -1.51
SFPQ-202ENST00000460428 TRBV25-1A0A075B6N4 114 aa5.63□□□□□ -1.51
SFPQ-202ENST00000460428 TRAV26-1A0A087WT03 109 aa5.63□□□□□ -1.51
SFPQ-202ENST00000460428 LOC100131303A0A0U1RQF7 123 aa5.63□□□□□ -1.51
SFPQ-202ENST00000460428 G3V4G9 280 aa5.63□□□□□ -1.51
SFPQ-202ENST00000460428 ATP5G1P05496 136 aa5.63□□□□□ -1.51
SFPQ-202ENST00000460428 ZNF22P17026 224 aaPredicted RBP5.63□□□□□ -1.51
SFPQ-202ENST00000460428 UBE2D1P51668 147 aa5.63□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 94.5 ms