RNA–Protein interactions for RNA: ENST00000457745.1

RIF1-208, Transcript of replication timing regulatory factor 1, humanhuman

TSL 1 (best)

Gene RIF1, Length 1,006 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-208ENST00000457745 C18orf15Q96N68 181 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 C20orf78Q9BR46 151 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 NDUFAF3Q9BU61 184 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 CHCHD7Q9BUK0 85 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 AP5S1Q9NUS5 200 aa6.1□□□□□ -1.43
RIF1-208ENST00000457745 TRBV27A0A0K0K1C4 114 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 HTN3P15516 51 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 S100A2P29034 98 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 CRYBA4P53673 196 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 UBE2D3P61077 147 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 DAD1P61803 113 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 UBE2D2P62837 147 aa6.09□□□□□ -1.43
RIF1-208ENST00000457745 OPRPNQ99935 248 aaPredicted RBP6.09□□□□□ -1.43
RIF1-208ENST00000457745 C11orf68Q9H3H3 251 aaKnown RBP6.09□□□□□ -1.43
RIF1-208ENST00000457745 ZMAT5Q9UDW3 170 aaKnown RBP6.09□□□□□ -1.43
RIF1-208ENST00000457745 A0A096LPF7 62 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 TRGV4A0A0C4DH28 118 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 SPART-AS1P0CW21 52 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 FCER1GP30273 86 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 DEFA6Q01524 100 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 CEMP1Q6PRD7 247 aaPredicted RBP6.08□□□□□ -1.44
RIF1-208ENST00000457745 TMEM18Q96B42 140 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 PMCHL2Q9BQD1 86 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 SPATA25Q9BR10 227 aa6.08□□□□□ -1.44
RIF1-208ENST00000457745 NXT2Q9NPJ8 142 aaKnown RBP6.08□□□□□ -1.44
RIF1-208ENST00000457745 PRKDCP78527 4128 aaKnown RBP6.07□□□□□ -1.44
RIF1-208ENST00000457745 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.07□□□□□ -1.44
RIF1-208ENST00000457745 TRBV6-4A0A1B0GX49 114 aa6.07□□□□□ -1.44
RIF1-208ENST00000457745 IGKV2-29A2NJV5 120 aaPredicted RBP6.07□□□□□ -1.44
RIF1-208ENST00000457745 HBDP02042 147 aa6.07□□□□□ -1.44
RIF1-208ENST00000457745 GYPEP15421 78 aa6.07□□□□□ -1.44
RIF1-208ENST00000457745 KRTDAPP60985 99 aa6.07□□□□□ -1.44
RIF1-208ENST00000457745 LAGE3Q14657 143 aa6.07□□□□□ -1.44
RIF1-208ENST00000457745 MEGF8Q7Z7M0 2845 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 TRAV26-1A0A087WT03 109 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 F5H768 121 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 I3L3M4 83 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 VCYO14598 125 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 BTF3P20290 206 aaKnown RBP6.06□□□□□ -1.44
RIF1-208ENST00000457745 MAJINQ3KP22 176 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 C2orf66Q6UXQ4 117 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 B9D2Q9BPU9 175 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 HHLA3Q9XRX5 114 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 TNFRSF18Q9Y5U5 241 aa6.06□□□□□ -1.44
RIF1-208ENST00000457745 COL7A1Q02388 2944 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 TRBV7-3A0A075B6L6 115 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 TRBV10-1A0A0K0K1A3 114 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 IGIPA6NJ69 53 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 H7C1H1 209 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 LEPROTL1O95214 131 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 NUDT3O95989 172 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 ATP5G1P05496 136 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 JOSD1Q15040 202 aaPredicted RBP6.05□□□□□ -1.44
RIF1-208ENST00000457745 RHOHQ15669 191 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 RNASE13Q5GAN3 156 aaKnown RBP6.05□□□□□ -1.44
RIF1-208ENST00000457745 LINC00518Q8N0U6 118 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 ATOH7Q8N100 152 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 C20orf203Q8NBC4 194 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 TOMM6Q96B49 74 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 DNAJC30Q96LL9 226 aa6.05□□□□□ -1.44
RIF1-208ENST00000457745 STAB2Q8WWQ8 2551 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 H0Y8G0 127 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 SYS1-DBNDD2H3BUS1 97 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 PPP1R17O96001 155 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 RPL36AP83881 106 aaKnown RBP6.04□□□□□ -1.44
RIF1-208ENST00000457745 RPL36ALQ969Q0 106 aaKnown RBP6.04□□□□□ -1.44
RIF1-208ENST00000457745 IFI27L1Q96BM0 104 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 TP73-AS1Q9UF72 201 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 PRO0255Q9UI72 69 aa6.04□□□□□ -1.44
RIF1-208ENST00000457745 ORMDL2Q53FV1 153 aa6.03□□□□□ -1.44
RIF1-208ENST00000457745 Q6ZUT4 128 aa6.03□□□□□ -1.44
RIF1-208ENST00000457745 C11orf45Q8TAV5 145 aa6.03□□□□□ -1.44
RIF1-208ENST00000457745 IGLV4-3A0A075B6K6 122 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 ODF1Q14990 250 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 BAALCQ8WXS3 180 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 KIR2DL4Q99706 377 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 PRADC1Q9BSG0 188 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 KRTAP4-9Q9BYQ8 210 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 UBE2D4Q9Y2X8 147 aa6.02□□□□□ -1.45
RIF1-208ENST00000457745 CIDEAO60543 219 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 COTL1Q14019 142 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 LINC01545Q5VT33 79 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 ATP6V0E2Q8NHE4 81 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 SCGB3A1Q96QR1 104 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 C12orf57Q99622 126 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 ZMAT4Q9H898 229 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 CYSLTR1Q9Y271 337 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 FBN3Q75N90 2809 aa6.01□□□□□ -1.45
RIF1-208ENST00000457745 IGLV4-69A0A075B6H9 119 aa6□□□□□ -1.45
RIF1-208ENST00000457745 IGLV4-60A0A075B6I1 120 aa6□□□□□ -1.45
RIF1-208ENST00000457745 DEFB131BA0A096LNP1 70 aa6□□□□□ -1.45
RIF1-208ENST00000457745 hDV102S1A0JD36 115 aa6□□□□□ -1.45
RIF1-208ENST00000457745 PRSS29PA6NIE9 313 aa6□□□□□ -1.45
RIF1-208ENST00000457745 SCGB1D1O95968 90 aa6□□□□□ -1.45
RIF1-208ENST00000457745 SMIM6P0DI80 62 aa6□□□□□ -1.45
RIF1-208ENST00000457745 TCTAP57738 103 aa6□□□□□ -1.45
RIF1-208ENST00000457745 GAGE6Q13070 117 aa6□□□□□ -1.45
RIF1-208ENST00000457745 TEX43Q6ZNM6 134 aa6□□□□□ -1.45
RIF1-208ENST00000457745 DAZ4Q86SG3 579 aaKnown RBP6□□□□□ -1.45
RIF1-208ENST00000457745 DAZ3Q9NR90 486 aaKnown RBP6□□□□□ -1.45
Retrieved 100 of 20,778 RNA–protein pairs in 38.8 ms