RNA–Protein interactions for RNA: ENST00000456089.1

TREX1-203, Transcript of three prime repair exonuclease 1, humanhuman

TSL 3 BASIC

Gene TREX1, Length 629 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TREX1-203ENST00000456089 FAM231BA6NCW3 169 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 FOXA3P55318 350 aaPredicted RBP8.55□□□□□ -1.04
TREX1-203ENST00000456089 COTL1Q14019 142 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 LINC01620Q4KN68 170 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 ATRAIDQ6UW56 229 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 NTM-AS1Q6ZSK4 140 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 TMEM243Q9BU79 118 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 TMEM70Q9BUB7 260 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 C1orf43Q9BWL3 253 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 NAT8Q9UHE5 227 aa8.55□□□□□ -1.04
TREX1-203ENST00000456089 FAM229AH3BQW9 127 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 RPL23P62829 140 aaKnown RBP8.54□□□□□ -1.04
TREX1-203ENST00000456089 IQCJQ1A5X6 159 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 Q8N976 141 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 GATD1Q8NB37 220 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 BAALCQ8WXS3 180 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 ISOC2Q96AB3 205 aa8.54□□□□□ -1.04
TREX1-203ENST00000456089 AMTP48728 403 aa8.53□□□□□ -1.04
TREX1-203ENST00000456089 RIGQ13278 110 aa8.53□□□□□ -1.04
TREX1-203ENST00000456089 C9JQL5 133 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 RBX1P62877 108 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 SRSF3P84103 164 aaKnown RBP8.52□□□□□ -1.05
TREX1-203ENST00000456089 MIAQ16674 131 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 DEFB104AQ8WTQ1 72 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 NAT8BQ9UHF3 227 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 V9GYV3 84 aa8.52□□□□□ -1.05
TREX1-203ENST00000456089 CLPSL2Q6UWE3 100 aa8.51□□□□□ -1.05
TREX1-203ENST00000456089 ENHOQ6UWT2 76 aa8.51□□□□□ -1.05
TREX1-203ENST00000456089 LINC00269Q8N2A0 174 aa8.51□□□□□ -1.05
TREX1-203ENST00000456089 RPL39LQ96EH5 51 aaKnown RBP8.51□□□□□ -1.05
TREX1-203ENST00000456089 TMEM191AQ9H0A3 160 aa8.51□□□□□ -1.05
TREX1-203ENST00000456089 HLA-DQA1P01909 254 aa8.5□□□□□ -1.05
TREX1-203ENST00000456089 PMCHP20382 165 aa8.5□□□□□ -1.05
TREX1-203ENST00000456089 C14orf177Q52M58 125 aa8.5□□□□□ -1.05
TREX1-203ENST00000456089 NUP35Q8NFH5 326 aa8.5□□□□□ -1.05
TREX1-203ENST00000456089 SDHAF1A6NFY7 115 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 NCR2O95944 276 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 APCSP02743 223 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 AMMECR1LQ6DCA0 310 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 MRAP2Q96G30 205 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 ST20Q9HBF5 79 aa8.49□□□□□ -1.05
TREX1-203ENST00000456089 A0A1B0GUV1 79 aa8.48□□□□□ -1.05
TREX1-203ENST00000456089 I3L3M4 83 aa8.48□□□□□ -1.05
TREX1-203ENST00000456089 REG3AQ06141 175 aa8.48□□□□□ -1.05
TREX1-203ENST00000456089 LINC00528Q8N1L1 170 aa8.48□□□□□ -1.05
TREX1-203ENST00000456089 PPP1R17O96001 155 aa8.47□□□□□ -1.05
TREX1-203ENST00000456089 RAB4AP20338 218 aa8.47□□□□□ -1.05
TREX1-203ENST00000456089 RNASEKQ6P5S7 137 aaKnown RBP8.47□□□□□ -1.05
TREX1-203ENST00000456089 Q6ZSA8 131 aa8.47□□□□□ -1.05
TREX1-203ENST00000456089 AMN1Q8IY45 258 aa8.47□□□□□ -1.05
TREX1-203ENST00000456089 PRR34Q9NV39 138 aa8.47□□□□□ -1.05
TREX1-203ENST00000456089 TRAV8-4A0A0B4J246 113 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 TRBV6-5A0A0K0K1A5 114 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 A0A1B0GW15 77 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 SMIM27A0A1W2PRY6 76 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 S100A8P05109 93 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 CAMPP49913 170 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 SCXQ7RTU7 201 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 C20orf203Q8NBC4 194 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 BTF3L4Q96K17 158 aa8.46□□□□□ -1.06
TREX1-203ENST00000456089 IGLV4-60A0A075B6I1 120 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 IGLV10-54A0A075B6I4 117 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 H7C423 109 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 J3QL48 77 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 PPP1R2P9O14990 202 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 RNF185Q96GF1 192 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 TMEM101Q96IK0 257 aa8.45□□□□□ -1.06
TREX1-203ENST00000456089 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.44□□□□□ -1.06
TREX1-203ENST00000456089 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
TREX1-203ENST00000456089 IGKV2-29A2NJV5 120 aaPredicted RBP8.44□□□□□ -1.06
TREX1-203ENST00000456089 USP17L23D6RBM5 183 aa8.44□□□□□ -1.06
TREX1-203ENST00000456089 F8W036 122 aa8.44□□□□□ -1.06
TREX1-203ENST00000456089 FCER1GP30273 86 aa8.44□□□□□ -1.06
TREX1-203ENST00000456089 SMKR1H3BMG3 65 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 VCYO14598 125 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 GAS8-AS1O95177 125 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 PLA2G1BP04054 148 aaKnown RBP8.43□□□□□ -1.06
TREX1-203ENST00000456089 HBBP68871 147 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 PNRC1Q12796 327 aaPredicted RBP8.43□□□□□ -1.06
TREX1-203ENST00000456089 FAM104BQ5XKR9 115 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 MRPL54Q6P161 138 aaKnown RBP8.43□□□□□ -1.06
TREX1-203ENST00000456089 TMEM242Q9NWH2 141 aa8.43□□□□□ -1.06
TREX1-203ENST00000456089 MT-ND4LP03901 98 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 FGF6P10767 208 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 ZNF25P17030 456 aaPredicted RBP8.42□□□□□ -1.06
TREX1-203ENST00000456089 CKS2P33552 79 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 RPS10P46783 165 aaKnown RBP8.42□□□□□ -1.06
TREX1-203ENST00000456089 CLLU1Q5K131 121 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 KIR2DL4Q99706 377 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 PKHD1L1Q86WI1 4243 aa8.42□□□□□ -1.06
TREX1-203ENST00000456089 LRP1Q07954 4544 aaKnown RBP8.41□□□□□ -1.06
TREX1-203ENST00000456089 TRBV27A0A0K0K1C4 114 aa8.41□□□□□ -1.06
TREX1-203ENST00000456089 LINC00862A6NCI5 91 aa8.41□□□□□ -1.06
TREX1-203ENST00000456089 TSHBP01222 138 aa8.41□□□□□ -1.06
TREX1-203ENST00000456089 POLR2KP53803 58 aaKnown RBP8.41□□□□□ -1.06
TREX1-203ENST00000456089 SUMO2P61956 95 aaKnown RBP8.41□□□□□ -1.06
TREX1-203ENST00000456089 SMAGPQ0VAQ4 97 aa8.41□□□□□ -1.06
TREX1-203ENST00000456089 MRPL51Q4U2R6 128 aaKnown RBP8.41□□□□□ -1.06
TREX1-203ENST00000456089 DGAT2L7PQ6IED9 249 aa8.41□□□□□ -1.06
TREX1-203ENST00000456089 CLRN3Q8NCR9 226 aa8.41□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms