RNA–Protein interactions for RNA: ENST00000454968.5

LINC00963-208, long intergenic non-protein coding RNA 963, humanhuman

TSL 1 (best) BASIC

Gene LINC00963, Length 1,403 nt, Biotype lincRNA, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00963-208ENST00000454968 A0A096LNJ9 63 aa11.53□□□□□ -0.56
LINC00963-208ENST00000454968 C15orf53Q8NAA6 179 aa11.53□□□□□ -0.56
LINC00963-208ENST00000454968 LAGE3Q14657 143 aa11.52□□□□□ -0.56
LINC00963-208ENST00000454968 ORMDL2Q53FV1 153 aa11.52□□□□□ -0.56
LINC00963-208ENST00000454968 TMEM97Q5BJF2 176 aa11.52□□□□□ -0.56
LINC00963-208ENST00000454968 IGHV3-38A0A0C4DH36 116 aa11.52□□□□□ -0.57
LINC00963-208ENST00000454968 COTL1Q14019 142 aa11.52□□□□□ -0.57
LINC00963-208ENST00000454968 RNASEKQ6P5S7 137 aaKnown RBP11.52□□□□□ -0.57
LINC00963-208ENST00000454968 CEMP1Q6PRD7 247 aaPredicted RBP11.52□□□□□ -0.57
LINC00963-208ENST00000454968 PACRGQ96M98 296 aaPredicted RBP11.52□□□□□ -0.57
LINC00963-208ENST00000454968 CHCHD7Q9BUK0 85 aa11.52□□□□□ -0.57
LINC00963-208ENST00000454968 TMA7Q9Y2S6 64 aaKnown RBP11.52□□□□□ -0.57
LINC00963-208ENST00000454968 S100A6P06703 90 aa11.51□□□□□ -0.57
LINC00963-208ENST00000454968 TRBV6-8A0A0A6YYG3 113 aa11.5□□□□□ -0.57
LINC00963-208ENST00000454968 IGHV1-24A0A0C4DH33 117 aa11.5□□□□□ -0.57
LINC00963-208ENST00000454968 NUPR2A6NF83 97 aa11.5□□□□□ -0.57
LINC00963-208ENST00000454968 FCER1GP30273 86 aa11.5□□□□□ -0.57
LINC00963-208ENST00000454968 C20orf203Q8NBC4 194 aa11.5□□□□□ -0.57
LINC00963-208ENST00000454968 HSBP1O75506 76 aa11.49□□□□□ -0.57
LINC00963-208ENST00000454968 HIST3H2BBQ8N257 126 aa11.49□□□□□ -0.57
LINC00963-208ENST00000454968 TENM2Q9NT68 2774 aa11.49□□□□□ -0.57
LINC00963-208ENST00000454968 TCTAP57738 103 aa11.48□□□□□ -0.57
LINC00963-208ENST00000454968 SNRPEP62304 92 aaKnown RBP11.48□□□□□ -0.57
LINC00963-208ENST00000454968 LYPD5Q6UWN5 251 aa11.48□□□□□ -0.57
LINC00963-208ENST00000454968 LINC01549A6NIU2 74 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 HBDP02042 147 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 G0S2P27469 103 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 PDZD11Q5EBL8 140 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 WWC2-AS2Q96NR7 200 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 APLNQ9ULZ1 77 aa11.47□□□□□ -0.57
LINC00963-208ENST00000454968 IFITM10A6NMD0 228 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 IGLL5B9A064 214 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 H7C423 109 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 NUDT3O95989 172 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 LELP1Q5T871 98 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 FAM19A2Q8N3H0 131 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 DEFB104AQ8WTQ1 72 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 TOMM6Q96B49 74 aa11.46□□□□□ -0.57
LINC00963-208ENST00000454968 TRBV25-1A0A075B6N4 114 aa11.45□□□□□ -0.58
LINC00963-208ENST00000454968 AMTP48728 403 aa11.45□□□□□ -0.58
LINC00963-208ENST00000454968 PMCHL1Q16048 86 aa11.45□□□□□ -0.58
LINC00963-208ENST00000454968 LYSTQ99698 3801 aa11.45□□□□□ -0.58
LINC00963-208ENST00000454968 VPS13DQ5THJ4 4388 aa11.45□□□□□ -0.58
LINC00963-208ENST00000454968 ESRGQ1W209 222 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 C2orf66Q6UXQ4 117 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 MRPL52Q86TS9 123 aaKnown RBP11.44□□□□□ -0.58
LINC00963-208ENST00000454968 MUC7Q8TAX7 377 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 TMEM243Q9BU79 118 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 TIMM21Q9BVV7 248 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 CYSLTR1Q9Y271 337 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 KLK5Q9Y337 293 aaPredicted RBP11.44□□□□□ -0.58
LINC00963-208ENST00000454968 PYGO1Q9Y3Y4 419 aa11.44□□□□□ -0.58
LINC00963-208ENST00000454968 IGIPA6NJ69 53 aa11.43□□□□□ -0.58
LINC00963-208ENST00000454968 HIST1H2BLQ99880 126 aa11.43□□□□□ -0.58
LINC00963-208ENST00000454968 CSDC2Q9Y534 153 aaKnown RBP11.43□□□□□ -0.58
LINC00963-208ENST00000454968 DNAH1Q9P2D7 4330 aa11.43□□□□□ -0.58
LINC00963-208ENST00000454968 NPSP0C0P6 89 aa11.43□□□□□ -0.58
LINC00963-208ENST00000454968 RPL39P62891 51 aaKnown RBP11.43□□□□□ -0.58
LINC00963-208ENST00000454968 FAM104AQ969W3 186 aa11.43□□□□□ -0.58
LINC00963-208ENST00000454968 BTF3P20290 206 aaKnown RBP11.42□□□□□ -0.58
LINC00963-208ENST00000454968 TMEM18Q96B42 140 aa11.42□□□□□ -0.58
LINC00963-208ENST00000454968 TIMM17AQ99595 171 aa11.42□□□□□ -0.58
LINC00963-208ENST00000454968 UBE2D4Q9Y2X8 147 aa11.42□□□□□ -0.58
LINC00963-208ENST00000454968 ERASQ7Z444 233 aa11.41□□□□□ -0.58
LINC00963-208ENST00000454968 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-208ENST00000454968 A0A1B0GUV1 79 aa11.4□□□□□ -0.58
LINC00963-208ENST00000454968 IGKV2-29A2NJV5 120 aaPredicted RBP11.4□□□□□ -0.58
LINC00963-208ENST00000454968 LEPROTL1O95214 131 aa11.4□□□□□ -0.58
LINC00963-208ENST00000454968 UPK3BQ9BT76 320 aa11.4□□□□□ -0.58
LINC00963-208ENST00000454968 SPANXA1Q9NS26 97 aa11.4□□□□□ -0.58
LINC00963-208ENST00000454968 MRPS16Q9Y3D3 137 aaKnown RBP11.4□□□□□ -0.58
LINC00963-208ENST00000454968 ZNF25P17030 456 aaPredicted RBP11.39□□□□□ -0.59
LINC00963-208ENST00000454968 LINC00588Q9Y4M8 146 aa11.39□□□□□ -0.59
LINC00963-208ENST00000454968 ATP5LO75964 103 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 FGF6P10767 208 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 S100A2P29034 98 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 MRPS36P82909 103 aaKnown RBP11.38□□□□□ -0.59
LINC00963-208ENST00000454968 LINC00173Q6ZV60 143 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 TMEM141Q96I45 108 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 HSPB8Q9UJY1 196 aa11.38□□□□□ -0.59
LINC00963-208ENST00000454968 PKIAP61925 76 aa11.37□□□□□ -0.59
LINC00963-208ENST00000454968 SMAGPQ0VAQ4 97 aa11.37□□□□□ -0.59
LINC00963-208ENST00000454968 SCGB3A1Q96QR1 104 aa11.37□□□□□ -0.59
LINC00963-208ENST00000454968 CHCHD5Q9BSY4 110 aa11.37□□□□□ -0.59
LINC00963-208ENST00000454968 TRAV8-6A0A0B4J262 113 aa11.36□□□□□ -0.59
LINC00963-208ENST00000454968 CCL18P55774 89 aa11.36□□□□□ -0.59
LINC00963-208ENST00000454968 IGLV4-3A0A075B6K6 122 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 C3orf84H3BNL1 204 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 UBE2L6O14933 153 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 FABP4P15090 132 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 GAGE6Q13070 117 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 SPATA12Q7Z6I5 190 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 WFDC10BQ8IUB3 73 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 IFI27L1Q96BM0 104 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 CDC42SE2Q9NRR3 84 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.35□□□□□ -0.59
LINC00963-208ENST00000454968 DNAH10OSP0CZ25 163 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 RBX1P62877 108 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 MPV17L2Q567V2 206 aa11.35□□□□□ -0.59
LINC00963-208ENST00000454968 ZFAND6Q6FIF0 208 aa11.35□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 135.6 ms