RNA–Protein interactions for RNA: ENST00000454830.6

CLK3-203, Transcript of CDC like kinase 3, humanhuman

TSL 5

Gene CLK3, Length 3,787 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-203ENST00000454830 C11orf86A6NJI1 115 aa9.88□□□□□ -0.83
CLK3-203ENST00000454830 VWFP04275 2813 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 HERVK_113P61574 105 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 GAGE12JA6NER3 117 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 IGIPA6NJ69 53 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 DEFB130BP0DP73 79 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 DEFB130AP0DP74 79 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 GAGE1Q13065 139 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 GAGE4Q13068 117 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 GAGE5Q13069 117 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 BEAN1Q3B7T3 259 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 GAGE13Q4V321 117 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 SPATA3Q8NHX4 192 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 CST9LQ9H4G1 147 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 PRADC1Q9BSG0 188 aa9.87□□□□□ -0.83
CLK3-203ENST00000454830 LINC01549A6NIU2 74 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 HSD52Q0P140 79 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 MAPKAPK5-AS1Q8N8E1 139 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 RNASE8Q8TDE3 154 aaKnown RBP9.86□□□□□ -0.83
CLK3-203ENST00000454830 NAA38Q9BRA0 125 aaKnown RBP9.86□□□□□ -0.83
CLK3-203ENST00000454830 CHAC1Q9BUX1 264 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 TRBV25-1A0A075B6N4 114 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 ORAOV1Q8WV07 137 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 TIMM17AQ99595 171 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 TRGV4A0A0C4DH28 118 aa9.86□□□□□ -0.83
CLK3-203ENST00000454830 RS1O15537 224 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 CLUHP3Q96NS8 147 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 HIST1H4GQ99525 98 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 ZNF815PA8K554 130 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 A6NDN8 102 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 RPL36AP83881 106 aaKnown RBP9.85□□□□□ -0.83
CLK3-203ENST00000454830 RPL36ALQ969Q0 106 aaKnown RBP9.85□□□□□ -0.83
CLK3-203ENST00000454830 C19orf73Q9NVV2 129 aa9.85□□□□□ -0.83
CLK3-203ENST00000454830 GIG44P09565 113 aaPredicted RBP9.84□□□□□ -0.83
CLK3-203ENST00000454830 C9orf66Q5T8R8 295 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 C16orf74Q96GX8 76 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 COX11Q9Y6N1 276 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 A0A0J9YXV3 536 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 K7EP13 123 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 PAPPA-AS1Q5QFB9 102 aa9.84□□□□□ -0.83
CLK3-203ENST00000454830 LINC00467Q9BRT7 94 aa9.83□□□□□ -0.84
CLK3-203ENST00000454830 DLEU1O43261 78 aa9.83□□□□□ -0.84
CLK3-203ENST00000454830 NPSP0C0P6 89 aa9.83□□□□□ -0.84
CLK3-203ENST00000454830 SRSF9Q13242 221 aaKnown RBP eCLIP9.82□□□□□ -0.84
CLK3-203ENST00000454830 MAST4O15021 2626 aa9.82□□□□□ -0.84
CLK3-203ENST00000454830 IGLV4-3A0A075B6K6 122 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 K7EQD1 137 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 SIVA1O15304 175 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 SEC11AP67812 179 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 PIK3CD-AS1Q5SR53 167 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 UFSP1Q6NVU6 142 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 SLC25A29Q8N8R3 303 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 TRBV7-3A0A075B6L6 115 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 DEFB4AO15263 64 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 NHP2Q9NX24 153 aaKnown RBP9.81□□□□□ -0.84
CLK3-203ENST00000454830 IGLV4-69A0A075B6H9 119 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 MYMXA0A1B0GTQ4 84 aa9.81□□□□□ -0.84
CLK3-203ENST00000454830 TAX1BP3O14907 124 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 LGALS3P17931 250 aaKnown RBP9.8□□□□□ -0.84
CLK3-203ENST00000454830 TRAV4A0A0B4J268 109 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 DEFB135Q30KP9 77 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 DNAJC30Q96LL9 226 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 FAM110AQ9BQ89 295 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 E9PLD3 99 aa9.8□□□□□ -0.84
CLK3-203ENST00000454830 STAB1Q9NY15 2570 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 INSL3P51460 131 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 FXYD2P54710 66 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 AMMECR1LQ6DCA0 310 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 LOC100131303A0A0U1RQF7 123 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 H3BUT2 72 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 IGKV3OR2-268A0A0C4DH90 116 aa9.79□□□□□ -0.84
CLK3-203ENST00000454830 GEMIN7Q9H840 131 aaKnown RBP9.79□□□□□ -0.84
CLK3-203ENST00000454830 K7ERJ3 54 aa9.78□□□□□ -0.84
CLK3-203ENST00000454830 UBE2L6O14933 153 aa9.78□□□□□ -0.84
CLK3-203ENST00000454830 Q6ZUT4 128 aa9.78□□□□□ -0.84
CLK3-203ENST00000454830 PTH2Q96A98 100 aa9.78□□□□□ -0.84
CLK3-203ENST00000454830 DAZ2Q13117 558 aaKnown RBP9.78□□□□□ -0.84
CLK3-203ENST00000454830 CHCHD7Q9BUK0 85 aa9.77□□□□□ -0.84
CLK3-203ENST00000454830 SMIM13P0DJ93 91 aa9.77□□□□□ -0.85
CLK3-203ENST00000454830 CSNK1G2-AS1Q8NCQ2 148 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 PLEKHB2Q96CS7 222 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 TRAV13-1A0A0B4J241 112 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 HIGD1BQ9P298 99 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 J3QQQ9 107 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 CEND1Q8N111 149 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 BAHCC1Q9P281 2608 aa9.76□□□□□ -0.85
CLK3-203ENST00000454830 EDA2RQ9HAV5 297 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 C3orf56Q8N813 242 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 CITED1Q99966 193 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 SPANXA1Q9NS26 97 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 UBE2D4Q9Y2X8 147 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 A0A096LPF7 62 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 IL17DQ8TAD2 202 aa9.75□□□□□ -0.85
CLK3-203ENST00000454830 TRBV10-1A0A0K0K1A3 114 aa9.74□□□□□ -0.85
CLK3-203ENST00000454830 PLAC8L1A1L4L8 177 aa9.74□□□□□ -0.85
CLK3-203ENST00000454830 ZNF22P17026 224 aaPredicted RBP9.74□□□□□ -0.85
CLK3-203ENST00000454830 TRAV8-3A0A0A6YYJ7 113 aa9.74□□□□□ -0.85
CLK3-203ENST00000454830 HTN3P15516 51 aa9.74□□□□□ -0.85
CLK3-203ENST00000454830 SPINK8P0C7L1 97 aa9.73□□□□□ -0.85
CLK3-203ENST00000454830 TSPEAR-AS2P59090 65 aa9.73□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms