RNA–Protein interactions for RNA: ENST00000453306.4

VCX3B-204, Transcript of variable charge X-linked 3B, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene VCX3B, Length 868 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCX3B-204ENST00000453306 TSHBP01222 138 aa10.62□□□□□ -0.71
VCX3B-204ENST00000453306 HLA-DQA1P01909 254 aa10.62□□□□□ -0.71
VCX3B-204ENST00000453306 PPBPP02775 128 aa10.62□□□□□ -0.71
VCX3B-204ENST00000453306 SUMO2P61956 95 aaKnown RBP10.62□□□□□ -0.71
VCX3B-204ENST00000453306 ORMDL3Q8N138 153 aa10.62□□□□□ -0.71
VCX3B-204ENST00000453306 TRBV27A0A0K0K1C4 114 aa10.61□□□□□ -0.71
VCX3B-204ENST00000453306 ALKBH7Q9BT30 221 aaPredicted RBP10.61□□□□□ -0.71
VCX3B-204ENST00000453306 PKD1P98161 4303 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 PRSS47A8MTI9 375 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 S100A1P23297 94 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 FABP9Q0Z7S8 132 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 IQCJQ1A5X6 159 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 COX19Q49B96 90 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 C20orf78Q9BR46 151 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 TRAPPC1Q9Y5R8 145 aa10.6□□□□□ -0.71
VCX3B-204ENST00000453306 NBDYA0A0U1RRE5 68 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 C16orf90A8MZG2 172 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 I3L3M4 83 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 PHOX2AO14813 284 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 SIVA1O15304 175 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 DNAH10OSP0CZ25 163 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 PMCHP20382 165 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 RPL32P62910 135 aaKnown RBP10.59□□□□□ -0.71
VCX3B-204ENST00000453306 C6orf223Q8N319 242 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 CHCHD7Q9BUK0 85 aa10.59□□□□□ -0.71
VCX3B-204ENST00000453306 DNAH11Q96DT5 4516 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 LOC389332A0A1B0GUA5 103 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 VCYO14598 125 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 PPP1R17O96001 155 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 MT-ND6P03923 174 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 ESDP10768 282 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 NIT1Q86X76 327 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 SMIM2Q9BVW6 85 aa10.58□□□□□ -0.72
VCX3B-204ENST00000453306 DYNC1H1Q14204 4646 aaKnown RBP10.58□□□□□ -0.72
VCX3B-204ENST00000453306 CDK2AP2O75956 126 aa10.57□□□□□ -0.72
VCX3B-204ENST00000453306 TNP2Q05952 138 aa10.57□□□□□ -0.72
VCX3B-204ENST00000453306 COTL1Q14019 142 aa10.57□□□□□ -0.72
VCX3B-204ENST00000453306 TRAV8-6A0A0B4J262 113 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 IGHV1-24A0A0C4DH33 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 TCAPO15273 167 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 IGHV3-30P01768 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 IGHV3-33P01772 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 IGHV3-30-3P0DP02 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 IGHV3-30-5P0DP03 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 RAB5AP20339 215 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 GAGE6Q13070 117 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 LAMTOR2Q9Y2Q5 125 aa10.56□□□□□ -0.72
VCX3B-204ENST00000453306 AMTP48728 403 aa10.55□□□□□ -0.72
VCX3B-204ENST00000453306 TMEM97Q5BJF2 176 aa10.55□□□□□ -0.72
VCX3B-204ENST00000453306 LINC01556Q5JQF7 62 aa10.55□□□□□ -0.72
VCX3B-204ENST00000453306 TMEM243Q9BU79 118 aa10.55□□□□□ -0.72
VCX3B-204ENST00000453306 ABCA13Q86UQ4 5058 aa10.55□□□□□ -0.72
VCX3B-204ENST00000453306 TRBV25-1A0A075B6N4 114 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.54□□□□□ -0.72
VCX3B-204ENST00000453306 IGKV2-29A2NJV5 120 aaPredicted RBP10.54□□□□□ -0.72
VCX3B-204ENST00000453306 TRGC2P03986 189 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 IFI27P40305 119 aaPredicted RBP10.54□□□□□ -0.72
VCX3B-204ENST00000453306 MPV17L2Q567V2 206 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 Q8N8P6 123 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 Q8N976 141 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 URB1-AS1Q96HZ7 61 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 CHCHD5Q9BSY4 110 aa10.54□□□□□ -0.72
VCX3B-204ENST00000453306 RBX1P62877 108 aa10.53□□□□□ -0.72
VCX3B-204ENST00000453306 TTC32Q5I0X7 151 aa10.53□□□□□ -0.72
VCX3B-204ENST00000453306 MAP1LC3AQ9H492 121 aa10.53□□□□□ -0.72
VCX3B-204ENST00000453306 IGLV4-60A0A075B6I1 120 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 TMEM262E9PQX1 116 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 MAPKAPK5-AS1Q8N8E1 139 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 SREK1IP1Q8N9Q2 155 aaPredicted RBP10.52□□□□□ -0.73
VCX3B-204ENST00000453306 C18orf32Q8TCD1 76 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 FAM104AQ969W3 186 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 KRTAP4-5Q9BYR2 181 aa10.52□□□□□ -0.73
VCX3B-204ENST00000453306 C20orf203Q8NBC4 194 aa10.51□□□□□ -0.73
VCX3B-204ENST00000453306 LINC01546A6NGU7 62 aa10.5□□□□□ -0.73
VCX3B-204ENST00000453306 RPL39P62891 51 aaKnown RBP10.5□□□□□ -0.73
VCX3B-204ENST00000453306 KIR2DL4Q99706 377 aa10.5□□□□□ -0.73
VCX3B-204ENST00000453306 IBA57-AS1B1ANH7 110 aa10.49□□□□□ -0.73
VCX3B-204ENST00000453306 FCER1GP30273 86 aa10.49□□□□□ -0.73
VCX3B-204ENST00000453306 KLK12Q9UKR0 248 aa10.49□□□□□ -0.73
VCX3B-204ENST00000453306 FGF6P10767 208 aa10.48□□□□□ -0.73
VCX3B-204ENST00000453306 BTF3P20290 206 aaKnown RBP10.48□□□□□ -0.73
VCX3B-204ENST00000453306 ENHOQ6UWT2 76 aa10.48□□□□□ -0.73
VCX3B-204ENST00000453306 Q6ZRN7 208 aaPredicted RBP10.48□□□□□ -0.73
VCX3B-204ENST00000453306 NXT2Q9NPJ8 142 aaKnown RBP10.48□□□□□ -0.73
VCX3B-204ENST00000453306 A0A087WX48 190 aa10.47□□□□□ -0.73
VCX3B-204ENST00000453306 A0A1B0GUV1 79 aa10.47□□□□□ -0.73
VCX3B-204ENST00000453306 SPATA12Q7Z6I5 190 aa10.47□□□□□ -0.73
VCX3B-204ENST00000453306 PRSS3P2Q8NHM4 247 aa10.47□□□□□ -0.73
VCX3B-204ENST00000453306 UBE2D4Q9Y2X8 147 aa10.47□□□□□ -0.73
VCX3B-204ENST00000453306 H7C423 109 aa10.46□□□□□ -0.73
VCX3B-204ENST00000453306 LINC00310P59036 64 aa10.46□□□□□ -0.73
VCX3B-204ENST00000453306 MRPL52Q86TS9 123 aaKnown RBP10.46□□□□□ -0.73
VCX3B-204ENST00000453306 OPRPNQ99935 248 aaPredicted RBP10.46□□□□□ -0.73
VCX3B-204ENST00000453306 A0A096LNJ9 63 aa10.45□□□□□ -0.74
VCX3B-204ENST00000453306 LAGE3Q14657 143 aa10.45□□□□□ -0.74
VCX3B-204ENST00000453306 Q8N1X5 172 aa10.45□□□□□ -0.74
VCX3B-204ENST00000453306 LINC00269Q8N2A0 174 aa10.45□□□□□ -0.74
VCX3B-204ENST00000453306 PRR34Q9NV39 138 aa10.45□□□□□ -0.74
VCX3B-204ENST00000453306 HSPG2P98160 4391 aa10.44□□□□□ -0.74
VCX3B-204ENST00000453306 TRAV9-2A0A087WT02 112 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 71.7 ms