RNA–Protein interactions for RNA: ENST00000450251.5

USP53-202, Transcript of ubiquitin specific peptidase 53, humanhuman

APPRIS P1 TSL 5 BASIC

Gene USP53, Length 6,072 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP53-202ENST00000450251 S4R3C0 116 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 F5P12259 2224 aa1.65□□□□□ -2.15
USP53-202ENST00000450251 TECTAO75443 2155 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 ACACAQ13085 2346 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 TRGV1A0A0A0MS02 117 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 ZNF73O43830 326 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 CRIP1P50238 77 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 POLR2KP53803 58 aaKnown RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 LINC00336Q6ZUF6 198 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 TPSG1Q9NRR2 321 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 PRRC2BQ5JSZ5 2229 aaKnown RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 MTORP42345 2549 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 PRM2P04554 102 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 FHL3Q13643 280 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 DEFB109BQ30KR1 87 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 IGKV2D-29A0A075B6S2 120 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-49A0A0A0MS15 119 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 ETDCA0A1B0GVM5 59 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 IGKV2-29A2NJV5 120 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 TSHBP01222 138 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 BRWD1-AS2P59051 145 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 LINC00205P59089 165 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 DEFB114Q30KQ6 69 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 SOSTDC1Q6X4U4 206 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 Q8N814 137 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 SMIM11BQ8TCY0 68 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 C16orf74Q96GX8 76 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 AMELXQ99217 191 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 RETNLBQ9BQ08 111 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 HIGD2AQ9BW72 106 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 CELA1Q9UNI1 258 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 LRRK1Q38SD2 2015 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-16A0A0C4DH30 117 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 LINC01547P58512 204 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 Q1T7F1 81 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 IGFL4Q6B9Z1 124 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 SAP25Q8TEE9 199 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 ITLN2Q8WWU7 325 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 USP9XQ93008 2570 aaPredicted RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 ARHGAP21Q5T5U3 1957 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 ASH1LQ9NR48 2969 aaKnown RBP1.64□□□□□ -2.15
USP53-202ENST00000450251 CACNA1EQ15878 2313 aa1.64□□□□□ -2.15
USP53-202ENST00000450251 IGHV3OR16-13A0A075B7E8 117 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-74A0A0B4J1X5 117 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 HCG22E2RYF7 251 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 C8orf87E5RJ46 101 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 WISP2O76076 250 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 IGKV3-20P01619 116 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 EDN2P20800 178 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 BSPH1Q075Z2 132 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 FHL2Q14192 279 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 MRGPRG-AS1Q2M3A8 158 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 Q5XG85 94 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 NTM-AS1Q6ZSK4 140 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 MDS2Q8NDY4 140 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 RNASE6Q93091 150 aaKnown RBP1.63□□□□□ -2.15
USP53-202ENST00000450251 B9D2Q9BPU9 175 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 LINC00846Q9NV44 126 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 DHRS4-AS1Q9P1J3 65 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CTSZQ9UBR2 303 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 HCFC1P51610 2035 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-73A0A0B4J1V6 119 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 M0QY20 66 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 GNRH2O43555 120 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CEMP1Q6PRD7 247 aaPredicted RBP1.63□□□□□ -2.15
USP53-202ENST00000450251 Q8N3U1 123 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 C9orf106Q8NAJ2 232 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 LINC00208Q96KT6 92 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 UBE2E2Q96LR5 201 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 PCSK5Q92824 1860 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 EML5Q05BV3 1969 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 IGHV3OR16-12A0A075B7B8 117 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 A0A087WVE0 104 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 TRBV6-4A0A1B0GX49 114 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 ATP6V0E1O15342 81 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 TFF1P04155 84 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CTSGP08311 255 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 ZFAND2AQ8N6M9 145 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 PRSS33Q8NF86 280 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 C2orf48Q96LS8 159 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 FAM30AQ9NZY2 134 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 RAI1Q7Z5J4 1906 aaPredicted RBP1.63□□□□□ -2.15
USP53-202ENST00000450251 ABCA12Q86UK0 2595 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 ATG2BQ96BY7 2078 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 DOCK3Q8IZD9 2030 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 IGHV3-35A0A0C4DH35 117 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 TNFRSF13BO14836 293 aaPredicted RBP1.63□□□□□ -2.15
USP53-202ENST00000450251 IGF1P05019 195 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CGB3P0DN86 165 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CGB7P0DN87 165 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 DSCR9P59020 149 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 TSPEAR-AS2P59090 65 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 EXPH5Q8NEV8 1989 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 NOTCH2Q04721 2471 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 MPDZO75970 2070 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 Q6ZRU5 148 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 CFAP46Q8IYW2 2715 aa1.63□□□□□ -2.15
USP53-202ENST00000450251 PINLYPA6NC86 204 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 ASB16-AS1Q495Z4 193 aa1.62□□□□□ -2.15
USP53-202ENST00000450251 PROK2Q9HC23 129 aa1.62□□□□□ -2.15
Retrieved 100 of 20,778 RNA–protein pairs in 37.3 ms