RNA–Protein interactions for RNA: ENST00000449264.2

TNF-208, Transcript of tumor necrosis factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene TNF, Length 1,676 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNF-208ENST00000449264 LAGE3Q14657 143 aa10.14□□□□□ -0.79
TNF-208ENST00000449264 SH2D6Q7Z4S9 175 aa10.14□□□□□ -0.79
TNF-208ENST00000449264 WWC2-AS2Q96NR7 200 aa10.14□□□□□ -0.79
TNF-208ENST00000449264 GTSF1LQ9H1H1 148 aa10.14□□□□□ -0.79
TNF-208ENST00000449264 STARD9Q9P2P6 4700 aa10.14□□□□□ -0.79
TNF-208ENST00000449264 HSBP1O75506 76 aa10.13□□□□□ -0.79
TNF-208ENST00000449264 AMTP48728 403 aa10.13□□□□□ -0.79
TNF-208ENST00000449264 PMCHL1Q16048 86 aa10.13□□□□□ -0.79
TNF-208ENST00000449264 MUC7Q8TAX7 377 aa10.13□□□□□ -0.79
TNF-208ENST00000449264 CHCHD1Q96BP2 118 aaKnown RBP10.13□□□□□ -0.79
TNF-208ENST00000449264 KLK5Q9Y337 293 aaPredicted RBP10.13□□□□□ -0.79
TNF-208ENST00000449264 NUPR1O60356 82 aa10.12□□□□□ -0.79
TNF-208ENST00000449264 ORMDL2Q53FV1 153 aa10.12□□□□□ -0.79
TNF-208ENST00000449264 NTM-AS1Q6ZSK4 140 aa10.12□□□□□ -0.79
TNF-208ENST00000449264 TENM2Q9NT68 2774 aa10.12□□□□□ -0.79
TNF-208ENST00000449264 PDZD11Q5EBL8 140 aa10.12□□□□□ -0.79
TNF-208ENST00000449264 TRBV25-1A0A075B6N4 114 aa10.11□□□□□ -0.79
TNF-208ENST00000449264 TRBV6-8A0A0A6YYG3 113 aa10.11□□□□□ -0.79
TNF-208ENST00000449264 LINC01546A6NGU7 62 aa10.11□□□□□ -0.79
TNF-208ENST00000449264 BTF3P20290 206 aaKnown RBP10.11□□□□□ -0.79
TNF-208ENST00000449264 COA6Q5JTJ3 125 aaKnown RBP10.11□□□□□ -0.79
TNF-208ENST00000449264 FAM19A2Q8N3H0 131 aa10.11□□□□□ -0.79
TNF-208ENST00000449264 PLECQ15149 4684 aaKnown RBP10.11□□□□□ -0.79
TNF-208ENST00000449264 IGKV2D-29A0A075B6S2 120 aaPredicted RBP10.1□□□□□ -0.79
TNF-208ENST00000449264 IGHV1-24A0A0C4DH33 117 aa10.1□□□□□ -0.79
TNF-208ENST00000449264 IGKV2-29A2NJV5 120 aaPredicted RBP10.1□□□□□ -0.79
TNF-208ENST00000449264 K7EMI3 77 aa10.1□□□□□ -0.79
TNF-208ENST00000449264 TMEM97Q5BJF2 176 aa10.1□□□□□ -0.79
TNF-208ENST00000449264 LYPD5Q6UWN5 251 aa10.1□□□□□ -0.79
TNF-208ENST00000449264 CHCHD7Q9BUK0 85 aa10.1□□□□□ -0.79
TNF-208ENST00000449264 SNRPEP62304 92 aaKnown RBP10.09□□□□□ -0.79
TNF-208ENST00000449264 HBDP02042 147 aa10.09□□□□□ -0.79
TNF-208ENST00000449264 RPL39P62891 51 aaKnown RBP10.09□□□□□ -0.79
TNF-208ENST00000449264 ESRGQ1W209 222 aa10.09□□□□□ -0.79
TNF-208ENST00000449264 CHCHD5Q9BSY4 110 aa10.09□□□□□ -0.79
TNF-208ENST00000449264 TMEM243Q9BU79 118 aa10.09□□□□□ -0.79
TNF-208ENST00000449264 APLNQ9ULZ1 77 aa10.09□□□□□ -0.79
TNF-208ENST00000449264 A0A096LNJ9 63 aa10.08□□□□□ -0.8
TNF-208ENST00000449264 UBE2L6O14933 153 aa10.08□□□□□ -0.8
TNF-208ENST00000449264 LELP1Q5T871 98 aa10.08□□□□□ -0.8
TNF-208ENST00000449264 C2orf66Q6UXQ4 117 aa10.08□□□□□ -0.8
TNF-208ENST00000449264 LYSTQ99698 3801 aa10.07□□□□□ -0.8
TNF-208ENST00000449264 ESDP10768 282 aa10.07□□□□□ -0.8
TNF-208ENST00000449264 C20orf203Q8NBC4 194 aa10.07□□□□□ -0.8
TNF-208ENST00000449264 CYSLTR1Q9Y271 337 aa10.07□□□□□ -0.8
TNF-208ENST00000449264 GAGE6Q13070 117 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 C5orf52A6NGY3 159 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 S100A2P29034 98 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 CCL18P55774 89 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 TIRAPP58753 221 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 HIST3H2BBQ8N257 126 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 TMEM18Q96B42 140 aa10.06□□□□□ -0.8
TNF-208ENST00000449264 TRAV8-6A0A0B4J262 113 aa10.05□□□□□ -0.8
TNF-208ENST00000449264 TOMM6Q96B49 74 aa10.05□□□□□ -0.8
TNF-208ENST00000449264 LINC00588Q9Y4M8 146 aa10.05□□□□□ -0.8
TNF-208ENST00000449264 TMEM262E9PQX1 116 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 FABP4P15090 132 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 G0S2P27469 103 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 TCTAP57738 103 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 AMMECR1LQ6DCA0 310 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 WFDC10BQ8IUB3 73 aa10.04□□□□□ -0.8
TNF-208ENST00000449264 FGF6P10767 208 aa10.03□□□□□ -0.8
TNF-208ENST00000449264 UBE2DNLQ8IWF7 75 aa10.03□□□□□ -0.8
TNF-208ENST00000449264 LEPROTL1O95214 131 aa10.02□□□□□ -0.8
TNF-208ENST00000449264 SCGB3A1Q96QR1 104 aa10.02□□□□□ -0.8
TNF-208ENST00000449264 UBE2D4Q9Y2X8 147 aa10.02□□□□□ -0.8
TNF-208ENST00000449264 MPV17L2Q567V2 206 aa10.02□□□□□ -0.81
TNF-208ENST00000449264 CASC10Q5T4H9 136 aa10.02□□□□□ -0.81
TNF-208ENST00000449264 LINC00173Q6ZV60 143 aa10.02□□□□□ -0.81
TNF-208ENST00000449264 Q8N3U1 123 aa10.02□□□□□ -0.81
TNF-208ENST00000449264 MRPS16Q9Y3D3 137 aaKnown RBP10.02□□□□□ -0.81
TNF-208ENST00000449264 A0A087WX48 190 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 C3orf84H3BNL1 204 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 H7C423 109 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 DGAT2L7PQ6IED9 249 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 Q8N976 141 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 HIST1H2BLQ99880 126 aa10.01□□□□□ -0.81
TNF-208ENST00000449264 IFITM10A6NMD0 228 aa10□□□□□ -0.81
TNF-208ENST00000449264 TMEM101Q96IK0 257 aa10□□□□□ -0.81
TNF-208ENST00000449264 OPRPNQ99935 248 aaPredicted RBP10□□□□□ -0.81
TNF-208ENST00000449264 SPANXA1Q9NS26 97 aa10□□□□□ -0.81
TNF-208ENST00000449264 LINC01549A6NIU2 74 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 SMAGPQ0VAQ4 97 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 RNASE13Q5GAN3 156 aaKnown RBP9.99□□□□□ -0.81
TNF-208ENST00000449264 Q6ZUT4 128 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 ERASQ7Z444 233 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 OR5A1Q8NGJ0 315 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 HSPB8Q9UJY1 196 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 IGIPA6NJ69 53 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP9.99□□□□□ -0.81
TNF-208ENST00000449264 IGHV3-30P01768 117 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 IGHV3-33P01772 117 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 IGHV3-30-3P0DP02 117 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 IGHV3-30-5P0DP03 117 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 RBX1P62877 108 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 MRPL52Q86TS9 123 aaKnown RBP9.99□□□□□ -0.81
TNF-208ENST00000449264 TIMM17AQ99595 171 aa9.99□□□□□ -0.81
TNF-208ENST00000449264 IGLV4-60A0A075B6I1 120 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 IGLV4-3A0A075B6K6 122 aa9.98□□□□□ -0.81
TNF-208ENST00000449264 H0Y8G0 127 aa9.98□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 36.7 ms