RNA–Protein interactions for RNA: ENST00000449190.5

RFX3-207, Transcript of regulatory factor X3, humanhuman

TSL 3

Gene RFX3, Length 869 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFX3-207ENST00000449190 UPK3BQ9BT76 320 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 Q9H8V8 135 aa6.31□□□□□ -1.4
RFX3-207ENST00000449190 TRBV25-1A0A075B6N4 114 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 TRBV6-8A0A0A6YYG3 113 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 IGHV1-24A0A0C4DH33 117 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 TMEM262E9PQX1 116 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 PHOX2AO14813 284 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 SIVA1O15304 175 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 TNFRSF6BO95407 300 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 FCER1GP30273 86 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 PKIAP61925 76 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 LINC00336Q6ZUF6 198 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 LYSTQ99698 3801 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 MRPL18Q9H0U6 180 aaKnown RBP6.3□□□□□ -1.4
RFX3-207ENST00000449190 LAMTOR2Q9Y2Q5 125 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 TRAPPC1Q9Y5R8 145 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 ALMS1Q8TCU4 4167 aa6.3□□□□□ -1.4
RFX3-207ENST00000449190 DNAH1Q9P2D7 4330 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 A6NJY4 79 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 M0R2N4 97 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 TCAPO15273 167 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 GAS8-AS1O95177 125 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 RPS10P46783 165 aaKnown RBP6.29□□□□□ -1.4
RFX3-207ENST00000449190 AMTP48728 403 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 SUMO2P61956 95 aaKnown RBP6.29□□□□□ -1.4
RFX3-207ENST00000449190 LCE4AQ5TA78 99 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 Q6ZR54 194 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 NRACQ8N912 160 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 KIR2DL4Q99706 377 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 CHCHD5Q9BSY4 110 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 TMEM70Q9BUB7 260 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 MAP1LC3AQ9H492 121 aa6.29□□□□□ -1.4
RFX3-207ENST00000449190 IGLV2-18A0A075B6J9 118 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 A0A087WX48 190 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 UBE2L6O14933 153 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 ATP6V1G1O75348 118 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 POLR2KP53803 58 aaKnown RBP6.28□□□□□ -1.4
RFX3-207ENST00000449190 KIAA1644Q3SXP7 199 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 TTC32Q5I0X7 151 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 TMEM243Q9BU79 118 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 KRTAP4-5Q9BYR2 181 aa6.28□□□□□ -1.4
RFX3-207ENST00000449190 NACAE9PAV3 2078 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 TRBV27A0A0K0K1C4 114 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 LOC389332A0A1B0GUA5 103 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 K7EP13 123 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 NPYP01303 97 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 RAB5AP20339 215 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 RPL32P62910 135 aaKnown RBP6.27□□□□□ -1.41
RFX3-207ENST00000449190 IQCJQ1A5X6 159 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 WFDC10BQ8IUB3 73 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 YPEL4Q96NS1 127 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 HYDINQ4G0P3 5121 aa6.27□□□□□ -1.41
RFX3-207ENST00000449190 NBDYA0A0U1RRE5 68 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 DNAH10OSP0CZ25 163 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 SMAGPQ0VAQ4 97 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 GAGE6Q13070 117 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 NTM-AS1Q6ZSK4 140 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 C10orf126Q8N4M7 172 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 PRSS3P2Q8NHM4 247 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 DEFB104AQ8WTQ1 72 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 TMEM18Q96B42 140 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 ALKBH7Q9BT30 221 aaPredicted RBP6.26□□□□□ -1.41
RFX3-207ENST00000449190 CHCHD7Q9BUK0 85 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 SMIM2Q9BVW6 85 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 KRTAP17-1Q9BYP8 105 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 VPS13DQ5THJ4 4388 aa6.26□□□□□ -1.41
RFX3-207ENST00000449190 PRSS47A8MTI9 375 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 H7C423 109 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 RTL8CO15255 209 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 SCO1O75880 301 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 TSHBP01222 138 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 IGHV3-30P01768 117 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 IGHV3-33P01772 117 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 IGHV3-30-3P0DP02 117 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 IGHV3-30-5P0DP03 117 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 LINC01556Q5JQF7 62 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 C1orf134Q5TEV5 83 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 AMMECR1LQ6DCA0 310 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 NIT1Q86X76 327 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 Q8N8P6 123 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 TMEM101Q96IK0 257 aa6.25□□□□□ -1.41
RFX3-207ENST00000449190 NXT2Q9NPJ8 142 aaKnown RBP6.25□□□□□ -1.41
RFX3-207ENST00000449190 PRSS29PA6NIE9 313 aa6.24□□□□□ -1.41
RFX3-207ENST00000449190 COLCA2A8K830 154 aa6.24□□□□□ -1.41
RFX3-207ENST00000449190 G0S2P27469 103 aa6.24□□□□□ -1.41
RFX3-207ENST00000449190 DGAT2L7PQ6IED9 249 aa6.24□□□□□ -1.41
RFX3-207ENST00000449190 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.23□□□□□ -1.41
RFX3-207ENST00000449190 IGKV2-29A2NJV5 120 aaPredicted RBP6.23□□□□□ -1.41
RFX3-207ENST00000449190 K7EMI3 77 aa6.23□□□□□ -1.41
RFX3-207ENST00000449190 BTF3P20290 206 aaKnown RBP6.23□□□□□ -1.41
RFX3-207ENST00000449190 RAB5BP61020 215 aa6.23□□□□□ -1.41
RFX3-207ENST00000449190 ORMDL2Q53FV1 153 aa6.23□□□□□ -1.41
RFX3-207ENST00000449190 RNASEKQ6P5S7 137 aaKnown RBP6.23□□□□□ -1.41
RFX3-207ENST00000449190 FA2HQ7L5A8 372 aa6.23□□□□□ -1.41
RFX3-207ENST00000449190 ANGP03950 147 aaKnown RBP6.22□□□□□ -1.41
RFX3-207ENST00000449190 TRGC2P03986 189 aa6.22□□□□□ -1.41
RFX3-207ENST00000449190 ESDP10768 282 aa6.22□□□□□ -1.41
RFX3-207ENST00000449190 IFI27P40305 119 aaPredicted RBP6.22□□□□□ -1.41
RFX3-207ENST00000449190 RBX1P62877 108 aa6.22□□□□□ -1.41
RFX3-207ENST00000449190 LAGE3Q14657 143 aa6.22□□□□□ -1.41
Retrieved 100 of 20,778 RNA–protein pairs in 58.1 ms