RNA–Protein interactions for RNA: ENST00000448878.6

CHCHD3-203, Transcript of coiled-coil-helix-coiled-coil-helix domain containing 3, humanhuman

TSL 5 BASIC

Gene CHCHD3, Length 1,038 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHCHD3-203ENST00000448878 A0A096LNI7 61 aa11.24□□□□□ -0.61
CHCHD3-203ENST00000448878 COTL1Q14019 142 aa11.24□□□□□ -0.61
CHCHD3-203ENST00000448878 GIPP09681 153 aaPredicted RBP11.23□□□□□ -0.61
CHCHD3-203ENST00000448878 TMUB2Q71RG4 321 aa11.23□□□□□ -0.61
CHCHD3-203ENST00000448878 FER1L6-AS1Q8NA97 138 aa11.23□□□□□ -0.61
CHCHD3-203ENST00000448878 SFT2D1Q8WV19 159 aa11.23□□□□□ -0.61
CHCHD3-203ENST00000448878 NIT2Q9NQR4 276 aa11.23□□□□□ -0.61
CHCHD3-203ENST00000448878 AMMECR1LQ6DCA0 310 aa11.22□□□□□ -0.61
CHCHD3-203ENST00000448878 PGLYRP4Q96LB8 373 aa11.22□□□□□ -0.61
CHCHD3-203ENST00000448878 Q6ZRP5 223 aa11.21□□□□□ -0.61
CHCHD3-203ENST00000448878 CHCHD10Q8WYQ3 142 aaPredicted RBP11.21□□□□□ -0.61
CHCHD3-203ENST00000448878 LINC00474Q9P2X8 69 aa11.21□□□□□ -0.61
CHCHD3-203ENST00000448878 CACNG7P62955 275 aa11.2□□□□□ -0.62
CHCHD3-203ENST00000448878 RNASEKQ6P5S7 137 aaKnown RBP11.2□□□□□ -0.62
CHCHD3-203ENST00000448878 OR2D3Q8NGH3 330 aa11.2□□□□□ -0.62
CHCHD3-203ENST00000448878 FAM213BQ8TBF2 198 aa11.2□□□□□ -0.62
CHCHD3-203ENST00000448878 hCG_2014768A0A024R1R8 64 aa11.19□□□□□ -0.62
CHCHD3-203ENST00000448878 GVQW2A0A096LPI5 108 aaPredicted RBP11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 ARPC5O15511 151 aa11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 TRGC1P0CF51 173 aa11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 RPL35P42766 123 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 RPS20P60866 119 aaKnown RBP11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 SRSF9Q13242 221 aaKnown RBP eCLIP11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 KCNRGQ8N5I3 272 aa11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 LINC00526Q96FQ7 95 aa11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 CYTL1Q9NRR1 136 aa11.18□□□□□ -0.62
CHCHD3-203ENST00000448878 IGLC6P0CF74 106 aa11.17□□□□□ -0.62
CHCHD3-203ENST00000448878 PKIGQ9Y2B9 76 aa11.17□□□□□ -0.62
CHCHD3-203ENST00000448878 A0A1B0GVG6 124 aa11.16□□□□□ -0.62
CHCHD3-203ENST00000448878 NTF3P20783 257 aa11.16□□□□□ -0.62
CHCHD3-203ENST00000448878 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 IGKV2-29A2NJV5 120 aaPredicted RBP11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 XKRY2A2RUG3 117 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 F2Z2F3 143 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 XCL1P47992 114 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 LYZL1Q6UWQ5 148 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 MBD3L1Q8WWY6 194 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 CARD19Q96LW7 228 aa11.15□□□□□ -0.62
CHCHD3-203ENST00000448878 FAM231BA6NCW3 169 aa11.14□□□□□ -0.63
CHCHD3-203ENST00000448878 IFNA1P01562 189 aa11.13□□□□□ -0.63
CHCHD3-203ENST00000448878 FOXI1Q12951 378 aa11.13□□□□□ -0.63
CHCHD3-203ENST00000448878 CENPWQ5EE01 88 aa11.13□□□□□ -0.63
CHCHD3-203ENST00000448878 TRAV26-2A0A0B4J265 109 aa11.12□□□□□ -0.63
CHCHD3-203ENST00000448878 H2AFB1P0C5Y9 115 aa11.12□□□□□ -0.63
CHCHD3-203ENST00000448878 GAGE2BQ13066 116 aa11.12□□□□□ -0.63
CHCHD3-203ENST00000448878 TWIST1Q15672 202 aa11.12□□□□□ -0.63
CHCHD3-203ENST00000448878 IGHV1-58A0A0C4DH39 117 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 UMAD1C9J7I0 102 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 ZNF561-AS1K7EIQ3 104 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 CCL25O15444 150 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 APCSP02743 223 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 FGF6P10767 208 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 GATD1Q8NB37 220 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 BTF3L4Q96K17 158 aa11.11□□□□□ -0.63
CHCHD3-203ENST00000448878 RAB19A4D1S5 217 aa11.1□□□□□ -0.63
CHCHD3-203ENST00000448878 SYCNQ0VAF6 134 aa11.1□□□□□ -0.63
CHCHD3-203ENST00000448878 OR5A1Q8NGJ0 315 aa11.1□□□□□ -0.63
CHCHD3-203ENST00000448878 TMEM101Q96IK0 257 aa11.1□□□□□ -0.63
CHCHD3-203ENST00000448878 GNG13Q9P2W3 67 aa11.1□□□□□ -0.63
CHCHD3-203ENST00000448878 C19orf71A6NCJ1 209 aa11.09□□□□□ -0.63
CHCHD3-203ENST00000448878 GNG4P50150 75 aa11.09□□□□□ -0.63
CHCHD3-203ENST00000448878 H7C423 109 aa11.08□□□□□ -0.64
CHCHD3-203ENST00000448878 NCR2O95944 276 aa11.08□□□□□ -0.64
CHCHD3-203ENST00000448878 MT-ND6P03923 174 aa11.08□□□□□ -0.64
CHCHD3-203ENST00000448878 AKAP14Q86UN6 197 aa11.08□□□□□ -0.64
CHCHD3-203ENST00000448878 RPL39LQ96EH5 51 aaKnown RBP11.08□□□□□ -0.64
CHCHD3-203ENST00000448878 LPAP08519 4548 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 LINC00959A0A1B0GUT2 108 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 G3V3Q6 166 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 PTTG1IPP53801 180 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 SS18Q15532 418 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 MANBALQ9NQG1 85 aa11.07□□□□□ -0.64
CHCHD3-203ENST00000448878 LOC107984640A0A0U1RRK4 108 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 SMLR1H3BR10 107 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 PMCHP20382 165 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 SMIM15Q7Z3B0 74 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 ZNF664Q8N3J9 261 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 C9orf62Q8N4C0 152 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 C11orf52Q96A22 123 aa11.06□□□□□ -0.64
CHCHD3-203ENST00000448878 A0A1W2PNN7 141 aa11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 ZNF25P17030 456 aaPredicted RBP11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 CCL20P78556 96 aa11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 C1orf137Q5JT78 98 aa11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 ISOC2Q96AB3 205 aa11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 PSORS1C2Q9UIG4 136 aa11.05□□□□□ -0.64
CHCHD3-203ENST00000448878 SDHAF1A6NFY7 115 aa11.04□□□□□ -0.64
CHCHD3-203ENST00000448878 CAMPP49913 170 aa11.04□□□□□ -0.64
CHCHD3-203ENST00000448878 BIN3Q9NQY0 253 aa11.04□□□□□ -0.64
CHCHD3-203ENST00000448878 BCL2P10415 239 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 MALP21145 153 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 EIF5AP63241 154 aaKnown RBP11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 EIF5AL1Q6IS14 154 aaKnown RBP11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 PRR26Q8N8Z3 221 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 NUDT10Q8NFP7 164 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 SMIM12Q96EX1 92 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 NUDT11Q96G61 164 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 MED9Q9NWA0 146 aa11.03□□□□□ -0.64
CHCHD3-203ENST00000448878 IGLV4-69A0A075B6H9 119 aa11.02□□□□□ -0.65
CHCHD3-203ENST00000448878 KANTRA0A1W2PQU2 76 aa11.02□□□□□ -0.65
CHCHD3-203ENST00000448878 I3L3M4 83 aa11.02□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 75.7 ms