RNA–Protein interactions for RNA: ENST00000448520.5

PDLIM2-213, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 894 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-213ENST00000448520 NRACQ8N912 160 aa9.34□□□□□ -0.91
PDLIM2-213ENST00000448520 TRAPPC1Q9Y5R8 145 aa9.34□□□□□ -0.91
PDLIM2-213ENST00000448520 EPM2AB3EWF7 344 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 H7C1H1 209 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 RAB5AP20339 215 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 FABP9Q0Z7S8 132 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 COX19Q49B96 90 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 OR10J3Q5JRS4 329 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 SREK1IP1Q8N9Q2 155 aaPredicted RBP9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 NIT2Q9NQR4 276 aa9.33□□□□□ -0.92
PDLIM2-213ENST00000448520 TRBV10-1A0A0K0K1A3 114 aa9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 UBE2D3P61077 147 aa9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 UBE2D2P62837 147 aa9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 RPL36AP83881 106 aaKnown RBP9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 RPL36ALQ969Q0 106 aaKnown RBP9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 PRELID3AQ96N28 172 aa9.32□□□□□ -0.92
PDLIM2-213ENST00000448520 TRBV7-3A0A075B6L6 115 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 TNFRSF6BO95407 300 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 MT-ND6P03923 174 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 SRIP30626 198 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 ORMDL3Q8N138 153 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 TNFRSF18Q9Y5U5 241 aa9.31□□□□□ -0.92
PDLIM2-213ENST00000448520 TRGC2P03986 189 aa9.3□□□□□ -0.92
PDLIM2-213ENST00000448520 ATP6V0E2Q8NHE4 81 aa9.3□□□□□ -0.92
PDLIM2-213ENST00000448520 DNAJC30Q96LL9 226 aa9.3□□□□□ -0.92
PDLIM2-213ENST00000448520 TRBV6-5A0A0K0K1A5 114 aa9.29□□□□□ -0.92
PDLIM2-213ENST00000448520 SDHAF1A6NFY7 115 aa9.29□□□□□ -0.92
PDLIM2-213ENST00000448520 PPBPP02775 128 aa9.29□□□□□ -0.92
PDLIM2-213ENST00000448520 ALKBH7Q9BT30 221 aaPredicted RBP9.29□□□□□ -0.92
PDLIM2-213ENST00000448520 ST20Q9HBF5 79 aa9.29□□□□□ -0.92
PDLIM2-213ENST00000448520 A0A087WTM6 91 aa9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 LOC389332A0A1B0GUA5 103 aa9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 XGP55808 180 aa9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 SUMO2P61956 95 aaKnown RBP9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 IQCJQ1A5X6 159 aa9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 TMEM70Q9BUB7 260 aa9.28□□□□□ -0.92
PDLIM2-213ENST00000448520 PHOX2AO14813 284 aa9.27□□□□□ -0.93
PDLIM2-213ENST00000448520 POLR2KP53803 58 aaKnown RBP9.27□□□□□ -0.93
PDLIM2-213ENST00000448520 NTM-AS1Q6ZSK4 140 aa9.27□□□□□ -0.93
PDLIM2-213ENST00000448520 SH2D6Q7Z4S9 175 aa9.27□□□□□ -0.93
PDLIM2-213ENST00000448520 C10orf126Q8N4M7 172 aa9.27□□□□□ -0.93
PDLIM2-213ENST00000448520 DNAH10OSP0CZ25 163 aa9.26□□□□□ -0.93
PDLIM2-213ENST00000448520 INAFM2P0DMQ5 153 aa9.26□□□□□ -0.93
PDLIM2-213ENST00000448520 SMIM2Q9BVW6 85 aa9.26□□□□□ -0.93
PDLIM2-213ENST00000448520 GTSF1LQ9H1H1 148 aa9.26□□□□□ -0.93
PDLIM2-213ENST00000448520 TSHBP01222 138 aa9.25□□□□□ -0.93
PDLIM2-213ENST00000448520 PMCHP20382 165 aa9.25□□□□□ -0.93
PDLIM2-213ENST00000448520 C20orf78Q9BR46 151 aa9.25□□□□□ -0.93
PDLIM2-213ENST00000448520 MAP1LC3AQ9H492 121 aa9.25□□□□□ -0.93
PDLIM2-213ENST00000448520 TCAPO15273 167 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 PPP1R17O96001 155 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 GCSHP23434 173 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 FUSP35637 526 aaKnown RBP eCLIP9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 DAZ4Q86SG3 579 aaKnown RBP9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 WFDC10BQ8IUB3 73 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 C18orf32Q8TCD1 76 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 DAZ3Q9NR90 486 aaKnown RBP9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 LAMTOR2Q9Y2Q5 125 aa9.24□□□□□ -0.93
PDLIM2-213ENST00000448520 TRBV27A0A0K0K1C4 114 aa9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 I3L3M4 83 aa9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 IFI27P40305 119 aaPredicted RBP9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 TIRAPP58753 221 aa9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 KRTAP10-1P60331 282 aa9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 Q8N3U1 123 aa9.23□□□□□ -0.93
PDLIM2-213ENST00000448520 DMBT1Q9UGM3 2413 aaPredicted RBP9.22□□□□□ -0.93
PDLIM2-213ENST00000448520 VCYO14598 125 aa9.22□□□□□ -0.93
PDLIM2-213ENST00000448520 COTL1Q14019 142 aa9.22□□□□□ -0.93
PDLIM2-213ENST00000448520 URB1-AS1Q96HZ7 61 aa9.22□□□□□ -0.93
PDLIM2-213ENST00000448520 TRBV6-8A0A0A6YYG3 113 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 PRSS47A8MTI9 375 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 AMTP48728 403 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 RPL32P62910 135 aaKnown RBP9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 LELP1Q5T871 98 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 Q5VSD8 79 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 Q8N8P6 123 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 CHCHD7Q9BUK0 85 aa9.21□□□□□ -0.94
PDLIM2-213ENST00000448520 FAM229AH3BQW9 127 aa9.2□□□□□ -0.94
PDLIM2-213ENST00000448520 PSCAO43653 123 aa9.2□□□□□ -0.94
PDLIM2-213ENST00000448520 FCER1GP30273 86 aa9.2□□□□□ -0.94
PDLIM2-213ENST00000448520 PRSS3P2Q8NHM4 247 aa9.2□□□□□ -0.94
PDLIM2-213ENST00000448520 NTN5Q8WTR8 489 aaPredicted RBP9.2□□□□□ -0.94
PDLIM2-213ENST00000448520 FLG2Q5D862 2391 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 TRAV8-6A0A0B4J262 113 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 IGHV1-24A0A0C4DH33 117 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 IGKV2-29A2NJV5 120 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BKO60814 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BJP06899 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BOP23527 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BBP33778 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BDP58876 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BCP62807 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 GAGE6Q13070 117 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST2H2BEQ16778 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 LINC01556Q5JQF7 62 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST2H2BFQ5QNW6 126 aaPredicted RBP9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BHQ93079 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 KIR2DL4Q99706 377 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BNQ99877 126 aa9.19□□□□□ -0.94
PDLIM2-213ENST00000448520 HIST1H2BMQ99879 126 aa9.19□□□□□ -0.94
Retrieved 100 of 20,778 RNA–protein pairs in 77.2 ms