RNA–Protein interactions for RNA: ENST00000448116.6

SHC1-210, Transcript of SHC adaptor protein 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene SHC1, Length 3,481 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHC1-210ENST00000448116 TCL1BO95988 128 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 LINC00694P0DN24 101 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 DUX3Q96PT4 197 aa9.52□□□□□ -0.89
SHC1-210ENST00000448116 ANKRD17O75179 2603 aaKnown RBP9.51□□□□□ -0.89
SHC1-210ENST00000448116 PRO1854Q9UHT4 67 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 FOXI1Q12951 378 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 Q1RN00 199 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 LRRK2Q5S007 2527 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 C2CD3Q4AC94 2353 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 PRSS2P07478 247 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 RHOHQ15669 191 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 LYRM7Q5U5X0 104 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 Q6ZUT4 128 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 FAM19A5Q7Z5A7 132 aaPredicted RBP9.51□□□□□ -0.89
SHC1-210ENST00000448116 EDA2RQ9HAV5 297 aa9.51□□□□□ -0.89
SHC1-210ENST00000448116 WIPF1O43516 503 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 CD28P10747 220 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 TEX29Q8N6K0 151 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 WNK1Q9H4A3 2382 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 ZNF22P17026 224 aaPredicted RBP9.5□□□□□ -0.89
SHC1-210ENST00000448116 SLURP1P55000 103 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 C18orf65Q6ZTR6 163 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 NFE4Q86UQ8 179 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 C10orf126Q8N4M7 172 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 LINC01356Q8N9X3 169 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 ABCA12Q86UK0 2595 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 TRGV11A0A075B6L2 103 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 ZFAND6Q6FIF0 208 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 Q9UF83 564 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 PKIGQ9Y2B9 76 aa9.5□□□□□ -0.89
SHC1-210ENST00000448116 CSMD2Q7Z408 3487 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 NAV2Q8IVL1 2488 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 IGLV4-3A0A075B6K6 122 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 TMEM223A0PJW6 202 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 RHODO00212 210 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 RBMY1A1P0DJD3 496 aaKnown RBP9.49□□□□□ -0.89
SHC1-210ENST00000448116 RBMY1CP0DJD4 496 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 RBMY1FQ15415 496 aaKnown RBP9.49□□□□□ -0.89
SHC1-210ENST00000448116 NSUN5P1Q3KNT7 163 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 MUSTN1Q8IVN3 82 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 ODF3Q96PU9 254 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 CDIP1Q9H305 208 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 SONP18583 2426 aaKnown RBP9.49□□□□□ -0.89
SHC1-210ENST00000448116 LEPROTO15243 131 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 UBE2D3P61077 147 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 UBE2D2P62837 147 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 AMELXQ99217 191 aa9.49□□□□□ -0.89
SHC1-210ENST00000448116 TRAV8-3A0A0A6YYJ7 113 aa9.48□□□□□ -0.89
SHC1-210ENST00000448116 FHL3Q13643 280 aa9.48□□□□□ -0.89
SHC1-210ENST00000448116 SETD2Q9BYW2 2564 aaPredicted RBP9.48□□□□□ -0.89
SHC1-210ENST00000448116 NPC2P61916 151 aa9.48□□□□□ -0.89
SHC1-210ENST00000448116 IGHV3-38A0A0C4DH36 116 aa9.47□□□□□ -0.89
SHC1-210ENST00000448116 C1orf43Q9BWL3 253 aa9.47□□□□□ -0.89
SHC1-210ENST00000448116 A8MWV9 139 aa9.47□□□□□ -0.89
SHC1-210ENST00000448116 J3QLI3 93 aa9.46□□□□□ -0.89
SHC1-210ENST00000448116 IGSF10Q6WRI0 2623 aa9.46□□□□□ -0.9
SHC1-210ENST00000448116 A8MZ25 164 aa9.46□□□□□ -0.9
SHC1-210ENST00000448116 C9JAW5 83 aa9.46□□□□□ -0.9
SHC1-210ENST00000448116 TIMM21Q9BVV7 248 aa9.46□□□□□ -0.9
SHC1-210ENST00000448116 LINC01587Q99440 93 aa9.46□□□□□ -0.9
SHC1-210ENST00000448116 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.45□□□□□ -0.9
SHC1-210ENST00000448116 IGKV2-29A2NJV5 120 aaPredicted RBP9.45□□□□□ -0.9
SHC1-210ENST00000448116 ELANEP08246 267 aa9.45□□□□□ -0.9
SHC1-210ENST00000448116 IGHV3-30-3P0DP02 117 aa9.45□□□□□ -0.9
SHC1-210ENST00000448116 CARD19Q96LW7 228 aa9.45□□□□□ -0.9
SHC1-210ENST00000448116 IGHV3OR16-12A0A075B7B8 117 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 Q6ZSN1 163 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 TEN1Q86WV5 123 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 PPDPFLQ8WWR9 84 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 PRRC2AP48634 2157 aaKnown RBP9.44□□□□□ -0.9
SHC1-210ENST00000448116 DSCR9P59020 149 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 UBE2E2Q96LR5 201 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 ZNF702PQ9H963 129 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 ZNF462Q96JM2 2506 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 A0A0J9YXY3 114 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 IGHV3-33P01772 117 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 TMEM61Q8N0U2 210 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 ANKRD29Q8N6D5 301 aa9.44□□□□□ -0.9
SHC1-210ENST00000448116 EIF4EBP3O60516 100 aaPredicted RBP9.43□□□□□ -0.9
SHC1-210ENST00000448116 TTC32Q5I0X7 151 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 HRCT1Q6UXD1 115 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 TMEM89A2RUT3 159 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 H3BMM0 161 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 NDUFV3P56181 108 aaKnown RBP9.43□□□□□ -0.9
SHC1-210ENST00000448116 DYNLRB2Q8TF09 96 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 MXRA5Q9NR99 2828 aa9.43□□□□□ -0.9
SHC1-210ENST00000448116 RBMY1BA6NDE4 496 aaKnown RBP9.43□□□□□ -0.9
SHC1-210ENST00000448116 RBMY1EA6NEQ0 496 aaKnown RBP9.43□□□□□ -0.9
SHC1-210ENST00000448116 RBMY1DP0C7P1 496 aaKnown RBP9.43□□□□□ -0.9
SHC1-210ENST00000448116 SLC25A20O43772 301 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 ATP6V0E2Q8NHE4 81 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 TMEM263Q8WUH6 116 aaKnown RBP9.42□□□□□ -0.9
SHC1-210ENST00000448116 CCDC168Q8NDH2 2452 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 M0R2P5 195 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 C11orf44Q8N8P7 122 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 NDUFA12Q9UI09 145 aa9.42□□□□□ -0.9
SHC1-210ENST00000448116 KLK5Q9Y337 293 aaPredicted RBP9.42□□□□□ -0.9
SHC1-210ENST00000448116 PRB1P04280 392 aa9.41□□□□□ -0.9
SHC1-210ENST00000448116 ZNF415Q09FC8 603 aa9.41□□□□□ -0.9
SHC1-210ENST00000448116 DGAT2L7PQ6IED9 249 aa9.41□□□□□ -0.9
Retrieved 100 of 20,778 RNA–protein pairs in 116.1 ms