RNA–Protein interactions for RNA: ENST00000444997.1

PDCD4-203, Transcript of programmed cell death 4, humanhuman

TSL 3

Gene PDCD4, Length 819 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDCD4-203ENST00000444997 TRAV8-4A0A0B4J246 113 aa11.36□□□□□ -0.59
PDCD4-203ENST00000444997 TRAV26-2A0A0B4J265 109 aa11.36□□□□□ -0.59
PDCD4-203ENST00000444997 PLA2G1BP04054 148 aaKnown RBP11.36□□□□□ -0.59
PDCD4-203ENST00000444997 CT83Q5H943 113 aa11.36□□□□□ -0.59
PDCD4-203ENST00000444997 DEFB104AQ8WTQ1 72 aa11.36□□□□□ -0.59
PDCD4-203ENST00000444997 FAM210AQ96ND0 272 aa11.36□□□□□ -0.59
PDCD4-203ENST00000444997 ZNF727A8MUV8 499 aa11.35□□□□□ -0.59
PDCD4-203ENST00000444997 C20orf203Q8NBC4 194 aa11.35□□□□□ -0.59
PDCD4-203ENST00000444997 IGLV10-54A0A075B6I4 117 aa11.34□□□□□ -0.59
PDCD4-203ENST00000444997 FOXA3P55318 350 aaPredicted RBP11.34□□□□□ -0.59
PDCD4-203ENST00000444997 DGAT2L7PQ6IED9 249 aa11.34□□□□□ -0.59
PDCD4-203ENST00000444997 LINC01551Q86U37 167 aa11.34□□□□□ -0.59
PDCD4-203ENST00000444997 IGLV4-60A0A075B6I1 120 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 NCR2O95944 276 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 SCXQ7RTU7 201 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 LINC00528Q8N1L1 170 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 CLRN3Q8NCR9 226 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 CHAC1Q9BUX1 264 aa11.33□□□□□ -0.6
PDCD4-203ENST00000444997 A0A1B0GVG6 124 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 PRSS1P07477 247 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 SRP19P09132 144 aaKnown RBP11.32□□□□□ -0.6
PDCD4-203ENST00000444997 AMMECR1LQ6DCA0 310 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 KRTAP26-1Q6PEX3 210 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 TSKUQ8WUA8 353 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 RPL39LQ96EH5 51 aaKnown RBP11.32□□□□□ -0.6
PDCD4-203ENST00000444997 GFRA4Q9GZZ7 299 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 OSTCQ9NRP0 149 aa11.32□□□□□ -0.6
PDCD4-203ENST00000444997 A0A1B0GUT8 65 aa11.31□□□□□ -0.6
PDCD4-203ENST00000444997 FAM231BA6NCW3 169 aa11.31□□□□□ -0.6
PDCD4-203ENST00000444997 SDHAF1A6NFY7 115 aa11.3□□□□□ -0.6
PDCD4-203ENST00000444997 HIGD1CA8MV81 97 aa11.3□□□□□ -0.6
PDCD4-203ENST00000444997 APCSP02743 223 aa11.3□□□□□ -0.6
PDCD4-203ENST00000444997 PMCHP20382 165 aa11.3□□□□□ -0.6
PDCD4-203ENST00000444997 H7C423 109 aa11.29□□□□□ -0.6
PDCD4-203ENST00000444997 TMEM241Q24JQ0 296 aa11.29□□□□□ -0.6
PDCD4-203ENST00000444997 FAM74A3Q4VXF1 159 aa11.29□□□□□ -0.6
PDCD4-203ENST00000444997 hDV102S1A0JD36 115 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 I3L3M4 83 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 RNASEKQ6P5S7 137 aaKnown RBP11.28□□□□□ -0.6
PDCD4-203ENST00000444997 C9orf163Q8N9P6 203 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 CIRBP-AS1Q8TBR5 109 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 TMEM191AQ9H0A3 160 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 ST20Q9HBF5 79 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 AP5S1Q9NUS5 200 aa11.28□□□□□ -0.6
PDCD4-203ENST00000444997 SRRM2Q9UQ35 2752 aaKnown RBP11.27□□□□□ -0.61
PDCD4-203ENST00000444997 IGKV3OR2-268A0A0C4DH90 116 aa11.27□□□□□ -0.61
PDCD4-203ENST00000444997 TRBV6-5A0A0K0K1A5 114 aa11.27□□□□□ -0.61
PDCD4-203ENST00000444997 RIGQ13278 110 aa11.27□□□□□ -0.61
PDCD4-203ENST00000444997 FAT1Q14517 4588 aa11.26□□□□□ -0.61
PDCD4-203ENST00000444997 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-203ENST00000444997 IGKV2-29A2NJV5 120 aaPredicted RBP11.26□□□□□ -0.61
PDCD4-203ENST00000444997 PEA15Q15121 130 aa11.26□□□□□ -0.61
PDCD4-203ENST00000444997 MRAP2Q96G30 205 aa11.26□□□□□ -0.61
PDCD4-203ENST00000444997 BTF3L4Q96K17 158 aa11.26□□□□□ -0.61
PDCD4-203ENST00000444997 TRAV16A0A0A6YYK6 109 aaPredicted RBP11.25□□□□□ -0.61
PDCD4-203ENST00000444997 FGF6P10767 208 aa11.25□□□□□ -0.61
PDCD4-203ENST00000444997 CFAP161Q6P656 301 aa11.25□□□□□ -0.61
PDCD4-203ENST00000444997 ISOC2Q96AB3 205 aa11.25□□□□□ -0.61
PDCD4-203ENST00000444997 TMEM101Q96IK0 257 aa11.25□□□□□ -0.61
PDCD4-203ENST00000444997 V9GYV3 84 aa11.25□□□□□ -0.61
PDCD4-203ENST00000444997 GAGE12HA6NDE8 117 aa11.24□□□□□ -0.61
PDCD4-203ENST00000444997 ZNF25P17030 456 aaPredicted RBP11.24□□□□□ -0.61
PDCD4-203ENST00000444997 RAB4AP20338 218 aa11.24□□□□□ -0.61
PDCD4-203ENST00000444997 ADIRFQ15847 76 aa11.24□□□□□ -0.61
PDCD4-203ENST00000444997 NAT8Q9UHE5 227 aa11.24□□□□□ -0.61
PDCD4-203ENST00000444997 NAT8BQ9UHF3 227 aa11.24□□□□□ -0.61
PDCD4-203ENST00000444997 PPP1R17O96001 155 aa11.23□□□□□ -0.61
PDCD4-203ENST00000444997 CNBPP62633 177 aaKnown RBP11.23□□□□□ -0.61
PDCD4-203ENST00000444997 RPL23P62829 140 aaKnown RBP11.23□□□□□ -0.61
PDCD4-203ENST00000444997 AMN1Q8IY45 258 aa11.23□□□□□ -0.61
PDCD4-203ENST00000444997 NUP35Q8NFH5 326 aa11.23□□□□□ -0.61
PDCD4-203ENST00000444997 RNF185Q96GF1 192 aa11.23□□□□□ -0.61
PDCD4-203ENST00000444997 SMDT1Q9H4I9 107 aa11.22□□□□□ -0.61
PDCD4-203ENST00000444997 IGHV3-64A0A075B6Q5 118 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 J3QL48 77 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 GAS8-AS1O95177 125 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 TSHBP01222 138 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 SDIM1Q6ZPB5 146 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 OR5A1Q8NGJ0 315 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 CHCHD10Q8WYQ3 142 aaPredicted RBP11.21□□□□□ -0.61
PDCD4-203ENST00000444997 TMEM242Q9NWH2 141 aa11.21□□□□□ -0.61
PDCD4-203ENST00000444997 VPS13BQ7Z7G8 4022 aa11.21□□□□□ -0.62
PDCD4-203ENST00000444997 C9JQL5 133 aa11.2□□□□□ -0.62
PDCD4-203ENST00000444997 VCYO14598 125 aa11.2□□□□□ -0.62
PDCD4-203ENST00000444997 POLR2KP53803 58 aaKnown RBP11.2□□□□□ -0.62
PDCD4-203ENST00000444997 DPH3Q96FX2 82 aa11.2□□□□□ -0.62
PDCD4-203ENST00000444997 DNAH8Q96JB1 4490 aa11.19□□□□□ -0.62
PDCD4-203ENST00000444997 TRBV27A0A0K0K1C4 114 aa11.19□□□□□ -0.62
PDCD4-203ENST00000444997 ESDP10768 282 aa11.19□□□□□ -0.62
PDCD4-203ENST00000444997 FCER1GP30273 86 aa11.19□□□□□ -0.62
PDCD4-203ENST00000444997 RPS10P46783 165 aaKnown RBP11.19□□□□□ -0.62
PDCD4-203ENST00000444997 A0A1B0GW15 77 aa11.18□□□□□ -0.62
PDCD4-203ENST00000444997 C7orf77A4D0Y5 90 aa11.18□□□□□ -0.62
PDCD4-203ENST00000444997 SRSF3P84103 164 aaKnown RBP11.18□□□□□ -0.62
PDCD4-203ENST00000444997 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP11.18□□□□□ -0.62
PDCD4-203ENST00000444997 SMIM27A0A1W2PRY6 76 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 SMKR1H3BMG3 65 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 PPP1R2P9O14990 202 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 SMAGPQ0VAQ4 97 aa11.17□□□□□ -0.62
PDCD4-203ENST00000444997 MRPL52Q86TS9 123 aaKnown RBP11.17□□□□□ -0.62
Retrieved 100 of 20,778 RNA–protein pairs in 74.9 ms