RNA–Protein interactions for RNA: ENST00000444475.5

UBR3-206, Transcript of ubiquitin protein ligase E3 component n-recognin 3, humanhuman

TSL 5

Gene UBR3, Length 3,821 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBR3-206ENST00000444475 HTTP42858 3142 aa2.5□□□□□ -2.01
UBR3-206ENST00000444475 TRAV22A0A0B4J277 110 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 CRYM-AS1A6NIL9 109 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 SMIM7Q9BQ49 75 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 ZNF355PQ9NSJ1 428 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 ANKRD17O75179 2603 aaKnown RBP2.49□□□□□ -2.01
UBR3-206ENST00000444475 A0A0B4J2C4 111 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 CRPP02741 224 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 C3orf79P0CE67 100 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 FASNP49327 2511 aaKnown RBP2.49□□□□□ -2.01
UBR3-206ENST00000444475 RTL8CO15255 209 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 RNF5Q99942 180 aa2.49□□□□□ -2.01
UBR3-206ENST00000444475 IGKV1D-42A0A075B6H8 117 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 LOC107984156A0A0G2JMH3 177 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 A0A1B0GU33 70 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 H3BQ85 93 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 ARL17AQ8IVW1 177 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 FBN3Q75N90 2809 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 GCN1Q92616 2671 aaKnown RBP2.48□□□□□ -2.01
UBR3-206ENST00000444475 A0A1W2PNM2 257 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 H7C2G1 150 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 ARTNQ5T4W7 220 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 TRAPPC1Q9Y5R8 145 aa2.48□□□□□ -2.01
UBR3-206ENST00000444475 A0A0C4DFX4 3053 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 IGLV10-54A0A075B6I4 117 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 MIFP14174 115 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 TIMM21Q9BVV7 248 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 TRBV10-3A0A0K0K1G6 114 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 C14orf132Q9NPU4 83 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 MANBALQ9NQG1 85 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 SCN3AQ9NY46 2000 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 IGHV1-18A0A0C4DH31 117 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 FAM168BA1KXE4 195 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 MIR22HGQ0VDD5 57 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 UNQ6493/PRO21345Q6UXR8 122 aaPredicted RBP2.47□□□□□ -2.01
UBR3-206ENST00000444475 PROK2Q9HC23 129 aa2.47□□□□□ -2.01
UBR3-206ENST00000444475 IGLV2-18A0A075B6J9 118 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 TRBV25-1A0A075B6N4 114 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 IGLV2-11P01706 119 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 LINC00483Q53H64 154 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 CDC42SE2Q9NRR3 84 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 C22orf24Q9Y442 160 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 GVINP1Q7Z2Y8 2422 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 EYSQ5T1H1 3165 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 A0A0G2JND7 137 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 SNRPGP15A8MWD9 76 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 ODF3BA8MYP8 253 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 KRTAP9-9Q9BYP9 154 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 KRTAP9-4Q9BYQ2 154 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 IGKV3D-11A0A0A0MRZ8 115 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 IGLV3-32A0A0A0MS00 114 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 C11orf86A6NJI1 115 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 ZNF56Q15929 161 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 LYPD6Q86Y78 171 aa2.46□□□□□ -2.02
UBR3-206ENST00000444475 ARID1BQ8NFD5 2236 aaPredicted RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 LAMA2P24043 3122 aaKnown RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 SDHAF1A6NFY7 115 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 C9orf163Q8N9P6 203 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 ZFHX4Q86UP3 3567 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 A0A096LNJ9 63 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 C2orf70A6NJV1 201 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 FAM223BA6NKX1 122 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 Q8N6K4 173 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 NCOR2Q9Y618 2525 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 ANKRD11Q6UB99 2663 aaPredicted RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 IGLV1-47P01700 117 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 RPL7L1Q6DKI1 246 aaKnown RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 CYB561D1Q8N8Q1 229 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 Q8N9P0 234 aaPredicted RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 KLF14Q8TD94 323 aaPredicted RBP2.45□□□□□ -2.02
UBR3-206ENST00000444475 PRUNE2Q8WUY3 3088 aa2.45□□□□□ -2.02
UBR3-206ENST00000444475 PIGBOS1A0A0B4J2F0 54 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 LOC101927531A0A1B0GV80 90 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 CLPSL1A2RUU4 121 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 IL4P05112 153 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 Q8TAT8 98 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 PRR34Q9NV39 138 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 NAV2Q8IVL1 2488 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 RANBP2P49792 3224 aaKnown RBP2.44□□□□□ -2.02
UBR3-206ENST00000444475 IGLV3-16A0A075B6K0 115 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 IQCF6A8MYZ5 107 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 IGHV3-53P01767 116 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 PRO1854Q9UHT4 67 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 TIMM9Q9Y5J7 89 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 DOCK9Q9BZ29 2069 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 DOCK11Q5JSL3 2073 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 CASC2Q6XLA1 102 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 GOLGA2P5Q9HBQ8 144 aa2.44□□□□□ -2.02
UBR3-206ENST00000444475 CACNA1HO95180 2353 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 FXYD1O00168 92 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 HMGN2P05204 90 aaKnown RBP2.43□□□□□ -2.02
UBR3-206ENST00000444475 UBE2D1P51668 147 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 DEFB113Q30KQ7 82 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 ST20-AS1Q8NBB2 130 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 SPTSSBQ8NFR3 76 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 FLNBO75369 2602 aaKnown RBP2.43□□□□□ -2.02
UBR3-206ENST00000444475 MYOFQ9NZM1 2061 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 TRBV6-7A0A0A0MS04 114 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 TEX49A0A1B0GTD5 131 aa2.43□□□□□ -2.02
UBR3-206ENST00000444475 NDUFA11Q86Y39 141 aa2.43□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.4 ms