RNA–Protein interactions for RNA: ENST00000442730.1

HDLBP-220, Transcript of high density lipoprotein binding protein, humanhuman

TSL 2

Gene HDLBP, Length 683 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-220ENST00000442730 ENHOQ6UWT2 76 aa14.6□□□□□ -0.07
HDLBP-220ENST00000442730 NIT2Q9NQR4 276 aa14.6□□□□□ -0.07
HDLBP-220ENST00000442730 IGHV1-24A0A0C4DH33 117 aa14.59□□□□□ -0.07
HDLBP-220ENST00000442730 CRPP02741 224 aa14.59□□□□□ -0.07
HDLBP-220ENST00000442730 ANGP03950 147 aaKnown RBP14.59□□□□□ -0.07
HDLBP-220ENST00000442730 RIGQ13278 110 aa14.59□□□□□ -0.07
HDLBP-220ENST00000442730 TRAV26-2A0A0B4J265 109 aa14.58□□□□□ -0.08
HDLBP-220ENST00000442730 TMEM218A2RU14 115 aa14.58□□□□□ -0.08
HDLBP-220ENST00000442730 PPP1R2P9O14990 202 aa14.58□□□□□ -0.08
HDLBP-220ENST00000442730 RBX1P62877 108 aa14.58□□□□□ -0.08
HDLBP-220ENST00000442730 GAGE6Q13070 117 aa14.58□□□□□ -0.08
HDLBP-220ENST00000442730 LINC00862A6NCI5 91 aa14.57□□□□□ -0.08
HDLBP-220ENST00000442730 F8W036 122 aa14.57□□□□□ -0.08
HDLBP-220ENST00000442730 GATD1Q8NB37 220 aa14.57□□□□□ -0.08
HDLBP-220ENST00000442730 C1orf43Q9BWL3 253 aa14.57□□□□□ -0.08
HDLBP-220ENST00000442730 DNAH8Q96JB1 4490 aa14.56□□□□□ -0.08
HDLBP-220ENST00000442730 TMEM70Q9BUB7 260 aa14.56□□□□□ -0.08
HDLBP-220ENST00000442730 TMEM191AQ9H0A3 160 aa14.56□□□□□ -0.08
HDLBP-220ENST00000442730 IGLV2-33A0A075B6J2 118 aaPredicted RBP14.55□□□□□ -0.08
HDLBP-220ENST00000442730 MT-ND4LP03901 98 aa14.55□□□□□ -0.08
HDLBP-220ENST00000442730 FRZBQ92765 325 aa14.55□□□□□ -0.08
HDLBP-220ENST00000442730 PRR34Q9NV39 138 aa14.55□□□□□ -0.08
HDLBP-220ENST00000442730 FAT1Q14517 4588 aa14.55□□□□□ -0.08
HDLBP-220ENST00000442730 MIAQ16674 131 aa14.54□□□□□ -0.08
HDLBP-220ENST00000442730 ANAPC16Q96DE5 110 aa14.54□□□□□ -0.08
HDLBP-220ENST00000442730 TMEM243Q9BU79 118 aa14.54□□□□□ -0.08
HDLBP-220ENST00000442730 HAMPP81172 84 aa14.53□□□□□ -0.08
HDLBP-220ENST00000442730 CLPSL2Q6UWE3 100 aa14.53□□□□□ -0.08
HDLBP-220ENST00000442730 DEFB104AQ8WTQ1 72 aa14.53□□□□□ -0.08
HDLBP-220ENST00000442730 RPL39LQ96EH5 51 aaKnown RBP14.53□□□□□ -0.08
HDLBP-220ENST00000442730 SEC11CQ9BY50 192 aa14.53□□□□□ -0.08
HDLBP-220ENST00000442730 A0A1B0GW15 77 aa14.52□□□□□ -0.09
HDLBP-220ENST00000442730 MRPL54Q6P161 138 aaKnown RBP14.52□□□□□ -0.09
HDLBP-220ENST00000442730 AMN1Q8IY45 258 aa14.52□□□□□ -0.09
HDLBP-220ENST00000442730 LINC00269Q8N2A0 174 aa14.52□□□□□ -0.09
HDLBP-220ENST00000442730 CAMPP49913 170 aa14.51□□□□□ -0.09
HDLBP-220ENST00000442730 COTL1Q14019 142 aa14.51□□□□□ -0.09
HDLBP-220ENST00000442730 RNF185Q96GF1 192 aa14.51□□□□□ -0.09
HDLBP-220ENST00000442730 FAM30AQ9NZY2 134 aa14.51□□□□□ -0.09
HDLBP-220ENST00000442730 EPM2AB3EWF7 344 aa14.5□□□□□ -0.09
HDLBP-220ENST00000442730 HBBP68871 147 aa14.5□□□□□ -0.09
HDLBP-220ENST00000442730 MRAP2Q96G30 205 aa14.5□□□□□ -0.09
HDLBP-220ENST00000442730 A0A1B0GXF2 115 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 S100A8P05109 93 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 RAB4AP20338 218 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 AMTP48728 403 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 C20orf203Q8NBC4 194 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 VPS13BQ7Z7G8 4022 aa14.49□□□□□ -0.09
HDLBP-220ENST00000442730 A0A1B0GUV1 79 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 HLA-DQA1P01909 254 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 REG3AQ06141 175 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 KRTAP26-1Q6PEX3 210 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 Q6ZSA8 131 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 ATP5L2Q7Z4Y8 100 aa14.48□□□□□ -0.09
HDLBP-220ENST00000442730 IGLV4-60A0A075B6I1 120 aa14.47□□□□□ -0.09
HDLBP-220ENST00000442730 GAS8-AS1O95177 125 aa14.47□□□□□ -0.09
HDLBP-220ENST00000442730 NCR2O95944 276 aa14.47□□□□□ -0.09
HDLBP-220ENST00000442730 LINC01620Q4KN68 170 aa14.47□□□□□ -0.09
HDLBP-220ENST00000442730 USP17L23D6RBM5 183 aa14.46□□□□□ -0.09
HDLBP-220ENST00000442730 UBE2L6O14933 153 aa14.46□□□□□ -0.09
HDLBP-220ENST00000442730 C14orf177Q52M58 125 aa14.46□□□□□ -0.09
HDLBP-220ENST00000442730 Q5VSD8 79 aa14.46□□□□□ -0.09
HDLBP-220ENST00000442730 FAM104BQ5XKR9 115 aa14.46□□□□□ -0.09
HDLBP-220ENST00000442730 CARHSP1Q9Y2V2 147 aaKnown RBP14.46□□□□□ -0.09
HDLBP-220ENST00000442730 TRBV6-5A0A0K0K1A5 114 aa14.45□□□□□ -0.1
HDLBP-220ENST00000442730 SDHAF1A6NFY7 115 aa14.45□□□□□ -0.1
HDLBP-220ENST00000442730 SMKR1H3BMG3 65 aa14.45□□□□□ -0.1
HDLBP-220ENST00000442730 SMR3BP02814 79 aaPredicted RBP14.45□□□□□ -0.1
HDLBP-220ENST00000442730 RPS10P46783 165 aaKnown RBP14.45□□□□□ -0.1
HDLBP-220ENST00000442730 MRPL51Q4U2R6 128 aaKnown RBP14.44□□□□□ -0.1
HDLBP-220ENST00000442730 C10orf91Q5T1B1 145 aa14.44□□□□□ -0.1
HDLBP-220ENST00000442730 ST20Q9HBF5 79 aa14.44□□□□□ -0.1
HDLBP-220ENST00000442730 IGLV10-54A0A075B6I4 117 aa14.43□□□□□ -0.1
HDLBP-220ENST00000442730 CTDSP1Q9GZU7 261 aa14.43□□□□□ -0.1
HDLBP-220ENST00000442730 APCSP02743 223 aa14.41□□□□□ -0.1
HDLBP-220ENST00000442730 BTF3L4Q96K17 158 aa14.41□□□□□ -0.1
HDLBP-220ENST00000442730 IMMP2LQ96T52 175 aa14.41□□□□□ -0.1
HDLBP-220ENST00000442730 SRRM2Q9UQ35 2752 aaKnown RBP14.4□□□□□ -0.1
HDLBP-220ENST00000442730 TRAV8-4A0A0B4J246 113 aa14.4□□□□□ -0.1
HDLBP-220ENST00000442730 PPP1R17O96001 155 aa14.4□□□□□ -0.1
HDLBP-220ENST00000442730 PRSS1P07477 247 aa14.4□□□□□ -0.1
HDLBP-220ENST00000442730 NRACQ8N912 160 aa14.4□□□□□ -0.1
HDLBP-220ENST00000442730 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.39□□□□□ -0.11
HDLBP-220ENST00000442730 IGKV2-29A2NJV5 120 aaPredicted RBP14.39□□□□□ -0.11
HDLBP-220ENST00000442730 I3L3M4 83 aa14.39□□□□□ -0.11
HDLBP-220ENST00000442730 RHEBQ15382 184 aa14.39□□□□□ -0.11
HDLBP-220ENST00000442730 H7C423 109 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 TSHBP01222 138 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 PMCHP20382 165 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 CKS2P33552 79 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 CLRN3Q8NCR9 226 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 TMEM242Q9NWH2 141 aa14.38□□□□□ -0.11
HDLBP-220ENST00000442730 C7orf77A4D0Y5 90 aa14.37□□□□□ -0.11
HDLBP-220ENST00000442730 D6R8Y8 96 aa14.37□□□□□ -0.11
HDLBP-220ENST00000442730 SUMO2P61956 95 aaKnown RBP14.37□□□□□ -0.11
HDLBP-220ENST00000442730 NDUFA5Q16718 116 aa14.37□□□□□ -0.11
HDLBP-220ENST00000442730 AMMECR1LQ6DCA0 310 aa14.37□□□□□ -0.11
HDLBP-220ENST00000442730 FGF6P10767 208 aa14.36□□□□□ -0.11
HDLBP-220ENST00000442730 SCXQ7RTU7 201 aa14.36□□□□□ -0.11
HDLBP-220ENST00000442730 TRAV9-1A0A075B6T8 112 aa14.35□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 114.8 ms