RNA–Protein interactions for RNA: ENST00000441443.6

SHOX2-203, Transcript of short stature homeobox 2, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene SHOX2, Length 3,038 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHOX2-203ENST00000441443 IGLV4-3A0A075B6K6 122 aa15.02□□□□□ -0.01
SHOX2-203ENST00000441443 IGHV4-61A0A0C4DH41 118 aa15.02□□□□□ -0.01
SHOX2-203ENST00000441443 TRAV12-2A0A075B6T6 113 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 FAM223BA6NKX1 122 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 RNASE13Q5GAN3 156 aaKnown RBP15.01□□□□□ -0.01
SHOX2-203ENST00000441443 FAM223AQ8IWN6 122 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 C20orf203Q8NBC4 194 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 LITAFQ99732 161 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 MYO9AB2RTY4 2548 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 NSUN5P1Q3KNT7 163 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 FAM110AQ9BQ89 295 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 A8MZ25 164 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 NRGNQ92686 78 aa15.01□□□□□ -0.01
SHOX2-203ENST00000441443 SORL1Q92673 2214 aa15□□□□□ -0.01
SHOX2-203ENST00000441443 NAV2Q8IVL1 2488 aa15□□□□□ -0.01
SHOX2-203ENST00000441443 CEMP1Q6PRD7 247 aaPredicted RBP15□□□□□ -0.01
SHOX2-203ENST00000441443 TIMM21Q9BVV7 248 aa15□□□□□ -0.01
SHOX2-203ENST00000441443 CCL19Q99731 98 aa14.99□□□□□ -0.01
SHOX2-203ENST00000441443 ATP5J2P56134 94 aa14.98□□□□□ -0.01
SHOX2-203ENST00000441443 RHOHQ15669 191 aa14.98□□□□□ -0.01
SHOX2-203ENST00000441443 A0A0J9YX75 114 aa14.98□□□□□ -0.01
SHOX2-203ENST00000441443 IGHV4-38-2P0DP08 117 aa14.98□□□□□ -0.01
SHOX2-203ENST00000441443 LINC01600Q96MT4 127 aa14.98□□□□□ -0.01
SHOX2-203ENST00000441443 IGHV3-16A0A0C4DH30 117 aa14.96□□□□□ -0.01
SHOX2-203ENST00000441443 COX6CP09669 75 aa14.96□□□□□ -0.01
SHOX2-203ENST00000441443 C19orf54Q5BKX5 351 aa14.96□□□□□ -0.01
SHOX2-203ENST00000441443 CFAP161Q6P656 301 aa14.96□□□□□ -0.01
SHOX2-203ENST00000441443 SONP18583 2426 aaKnown RBP14.96□□□□□ -0.02
SHOX2-203ENST00000441443 CD28P10747 220 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 NDUFA12Q9UI09 145 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 I3L3M4 83 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 MOB4Q9Y3A3 225 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 PF4V1P10720 104 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 DAND5Q8N907 189 aa14.95□□□□□ -0.02
SHOX2-203ENST00000441443 SETD2Q9BYW2 2564 aaPredicted RBP14.94□□□□□ -0.02
SHOX2-203ENST00000441443 CCDC168Q8NDH2 2452 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 USP24Q9UPU5 2620 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 H3BT86 120 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 C9orf85Q96MD7 179 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 PIMREGQ9BSJ6 248 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 IGHV4-30-2A0A087WSY4 118 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 IGHV3-73A0A0B4J1V6 119 aa14.94□□□□□ -0.02
SHOX2-203ENST00000441443 TRGV11A0A075B6L2 103 aa14.93□□□□□ -0.02
SHOX2-203ENST00000441443 H3BUX3 64 aa14.92□□□□□ -0.02
SHOX2-203ENST00000441443 FAM104AQ969W3 186 aa14.92□□□□□ -0.02
SHOX2-203ENST00000441443 LST1O00453 97 aa14.92□□□□□ -0.02
SHOX2-203ENST00000441443 BLCAPP62952 87 aa14.91□□□□□ -0.02
SHOX2-203ENST00000441443 MIAQ16674 131 aa14.91□□□□□ -0.02
SHOX2-203ENST00000441443 MAPK1IP1LQ8NDC0 245 aa14.91□□□□□ -0.02
SHOX2-203ENST00000441443 IGHV1-58A0A0C4DH39 117 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 DAZ1Q9NQZ3 744 aaKnown RBP14.9□□□□□ -0.02
SHOX2-203ENST00000441443 PROK1P58294 105 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 SPINK13Q1W4C9 94 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 DCANP1Q8TF63 244 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 SPANXDQ9BXN6 97 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 SPANXCQ9NY87 97 aa14.9□□□□□ -0.02
SHOX2-203ENST00000441443 MRPS36P82909 103 aaKnown RBP14.89□□□□□ -0.03
SHOX2-203ENST00000441443 TMEM61Q8N0U2 210 aa14.89□□□□□ -0.03
SHOX2-203ENST00000441443 PRB1P04280 392 aa14.89□□□□□ -0.03
SHOX2-203ENST00000441443 ID1P41134 155 aa14.89□□□□□ -0.03
SHOX2-203ENST00000441443 MRPL23Q16540 153 aaKnown RBP14.89□□□□□ -0.03
SHOX2-203ENST00000441443 HTN1P15515 57 aa14.88□□□□□ -0.03
SHOX2-203ENST00000441443 FAM236AA0A1B0GUQ0 79 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 FAM236BA0A1B0GV22 79 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 DUX5Q96PT3 197 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 FAM240AA0A1B0GVK7 77 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 C10orf105Q8TEF2 133 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 VSIG2Q96IQ7 327 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 Q9UF83 564 aa14.87□□□□□ -0.03
SHOX2-203ENST00000441443 NOTCH3Q9UM47 2321 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 BRI3O95415 125 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 TMEM95Q3KNT9 176 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 IGHV1OR15-1A0A075B7D0 117 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 USMG5Q96IX5 58 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 LINC01587Q99440 93 aa14.86□□□□□ -0.03
SHOX2-203ENST00000441443 DEFB121Q5J5C9 76 aa14.85□□□□□ -0.03
SHOX2-203ENST00000441443 TRBV7-7A0A0K0K1E9 115 aa14.85□□□□□ -0.03
SHOX2-203ENST00000441443 TMEM101Q96IK0 257 aa14.84□□□□□ -0.03
SHOX2-203ENST00000441443 A0A0U1RRA0 63 aa14.84□□□□□ -0.03
SHOX2-203ENST00000441443 AVPP01185 164 aa14.84□□□□□ -0.03
SHOX2-203ENST00000441443 MXRA5Q9NR99 2828 aa14.84□□□□□ -0.03
SHOX2-203ENST00000441443 TEX15Q9BXT5 2789 aa14.83□□□□□ -0.04
SHOX2-203ENST00000441443 KNCNA6PVL3 124 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 MSMBP08118 114 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 PYGO1Q9Y3Y4 419 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 IGKV2D-29A0A075B6S2 120 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-203ENST00000441443 IGKV2-29A2NJV5 120 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-203ENST00000441443 SPANXA1Q9NS26 97 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 FBN2P35556 2912 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 CITED2Q99967 270 aaPredicted RBP14.82□□□□□ -0.04
SHOX2-203ENST00000441443 PPDPFQ9H3Y8 114 aa14.82□□□□□ -0.04
SHOX2-203ENST00000441443 CUBNO60494 3623 aa14.81□□□□□ -0.04
SHOX2-203ENST00000441443 SMCR5Q8TEV8 140 aa14.81□□□□□ -0.04
SHOX2-203ENST00000441443 ZNF625Q96I27 306 aaPredicted RBP14.81□□□□□ -0.04
SHOX2-203ENST00000441443 PRM2P04554 102 aa14.81□□□□□ -0.04
SHOX2-203ENST00000441443 IGHG2P01859 326 aa14.8□□□□□ -0.04
SHOX2-203ENST00000441443 YAE1D1Q9NRH1 226 aa14.8□□□□□ -0.04
SHOX2-203ENST00000441443 TINCRA0A1B0GVN0 87 aa14.79□□□□□ -0.04
SHOX2-203ENST00000441443 TNFRSF18Q9Y5U5 241 aa14.79□□□□□ -0.04
SHOX2-203ENST00000441443 CDKN2A-AS1Q9UH64 79 aa14.79□□□□□ -0.04
Retrieved 100 of 20,778 RNA–protein pairs in 160.2 ms