RNA–Protein interactions for RNA: ENST00000440127.1

HMGB3P11-201, Transcript of high mobility group box 3 pseudogene 11, humanhuman

BASIC

Gene HMGB3P11, Length 604 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB3P11-201ENST00000440127 PRRC2CQ9Y520 2896 aaKnown RBP2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 MUC3AQ02505 3323 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 DMXL1Q9Y485 3027 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRAV25A0A0B4J276 109 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 A6NDN8 102 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 SDHAF1A6NFY7 115 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 RPL37AP8A6NKH3 93 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 KNCNA6PVL3 124 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 A8MTW9 85 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 F8VRH5 84 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 H3BMM0 161 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 H3BRM9 83 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 TAX1BP3O14907 124 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 CRYGDP07320 174 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 HLA-DRB4P13762 266 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 PLNP26678 52 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 TCTAP57738 103 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 DEFB131AP59861 70 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 ZNF56Q15929 161 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 DEFB136Q30KP8 78 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 DEFB114Q30KQ6 69 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 C9orf66Q5T8R8 295 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 ZFP2Q6ZN57 461 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 Q6ZVH6 145 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 PCP2Q8IVA1 136 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 KLHL30-AS1Q8NEE0 82 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 DYNLRB2Q8TF09 96 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 TMEM141Q96I45 108 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 KIR2DL4Q99706 377 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 CYSLTR1Q9Y271 337 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 HLA-DRB4X5D2U9 266 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 NOTCH2Q04721 2471 aa2.44□□□□□ -2.02
HMGB3P11-201ENST00000440127 COL6A6A6NMZ7 2263 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGKV2D-26A0A0A0MRZ7 120 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRBV27A0A0K0K1C4 114 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 LOC100131303A0A0U1RQF7 123 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 I3L3M4 83 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 J3QKU1 62 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 M0QY20 66 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 CCL25O15444 150 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 SMIM13P0DJ93 91 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 CMC4P56277 68 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 RIPPLY3P57055 190 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 PMVKQ15126 192 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 RHOHQ15669 191 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 VAMP3Q15836 100 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TAL2Q16559 108 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 FAM74A4Q5TZK3 123 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 AMMECR1LQ6DCA0 310 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 UFSP1Q6NVU6 142 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 Q6ZR54 194 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 NEGR1Q7Z3B1 354 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TMEM61Q8N0U2 210 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 Q8N377 158 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 OR4C5Q8NGB2 326 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 BAALCQ8WXS3 180 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 PTH2Q96A98 100 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC01587Q99440 93 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TIMM17AQ99595 171 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC00467Q9BRT7 94 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 C16orf95Q9H693 158 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 GEMIN7Q9H840 131 aaKnown RBP2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TP53TG1Q9Y2A0 90 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 ZNF256Q9Y2P7 627 aaPredicted RBP2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 SPENQ96T58 3664 aaKnown RBP2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 ATRXP46100 2492 aa2.43□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRBV25-1A0A075B6N4 114 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 TRAV8-6A0A0B4J262 113 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 MYMXA0A1B0GTQ4 84 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1BA6NDE4 496 aaKnown RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1EA6NEQ0 496 aaKnown RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 IGIPA6NJ69 53 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 A8MWV9 139 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 OR11H12B2RN74 326 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 E9PLD3 99 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 M0R2P5 195 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 INSP01308 110 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1DP0C7P1 496 aaKnown RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 DNAH10OSP0CZ25 163 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1A1P0DJD3 496 aaKnown RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1CP0DJD4 496 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 CD28P10747 220 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 HTN1P15515 57 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 RBMY1FQ15415 496 aaKnown RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 NSUN5P1Q3KNT7 163 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 MORN3Q6PF18 240 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 GTF2H5Q6ZYL4 71 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 KRTAP5-2Q701N4 177 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 LINC00612Q8N6U2 182 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 OR11H2Q8NH07 326 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 DNAJC30Q96LL9 226 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 CHAC1Q9BUX1 264 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 TTTY13Q9BZ97 58 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 CST9LQ9H4G1 147 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 EDA2RQ9HAV5 297 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 TSSC4Q9Y5U2 329 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 HIVEP3Q5T1R4 2406 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 HRNRQ86YZ3 2850 aaPredicted RBP2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 CELSR3Q9NYQ7 3312 aa2.42□□□□□ -2.02
HMGB3P11-201ENST00000440127 LOC400499M0QZD8 3231 aa2.42□□□□□ -2.02
Retrieved 100 of 20,778 RNA–protein pairs in 62.7 ms