RNA–Protein interactions for RNA: ENST00000440097.5

LIMD1-202, Transcript of LIM domains containing 1, humanhuman

TSL 5 BASIC

Gene LIMD1, Length 2,773 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD1-202ENST00000440097 ERG28Q9UKR5 140 aa10.46□□□□□ -0.74
LIMD1-202ENST00000440097 C2orf66Q6UXQ4 117 aa10.45□□□□□ -0.74
LIMD1-202ENST00000440097 ODF3Q96PU9 254 aa10.45□□□□□ -0.74
LIMD1-202ENST00000440097 NDUFA11Q86Y39 141 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 MED14OSP0DP75 135 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 DEFB114Q30KQ6 69 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 FAM74A4Q5TZK3 123 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 Q8N1Y9 231 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 KIR2DL4Q99706 377 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 MDFICQ9P1T7 246 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 TENM1Q9UKZ4 2725 aa10.44□□□□□ -0.74
LIMD1-202ENST00000440097 F5H697 171 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 LYRM7Q5U5X0 104 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 IGHV1OR15-1A0A075B7D0 117 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 A0A087WWL8 130 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 JPT2Q9H910 190 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 MUC4Q99102 2169 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 CYSRT1A8MQ03 144 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 A8MWV9 139 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 EMP1P54849 157 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 ANAPC13Q9BS18 74 aa10.43□□□□□ -0.74
LIMD1-202ENST00000440097 HILS1P60008 231 aa10.42□□□□□ -0.74
LIMD1-202ENST00000440097 ANKRD29Q8N6D5 301 aa10.42□□□□□ -0.74
LIMD1-202ENST00000440097 A0A0J9YY99 117 aa10.42□□□□□ -0.74
LIMD1-202ENST00000440097 LY6G6DO95868 133 aa10.42□□□□□ -0.74
LIMD1-202ENST00000440097 MAP6D1Q9H9H5 199 aa10.42□□□□□ -0.74
LIMD1-202ENST00000440097 C11orf86A6NJI1 115 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 NSUN5P1Q3KNT7 163 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 SBSPONQ8IVN8 264 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 H3BMM0 161 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 CRYGDP07320 174 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 CFC1BP0CG36 223 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 CFC1P0CG37 223 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 VCX2Q9H322 139 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 SS18L2Q9UHA2 77 aa10.41□□□□□ -0.74
LIMD1-202ENST00000440097 TRBV20-1A0A075B6N2 111 aa10.4□□□□□ -0.74
LIMD1-202ENST00000440097 IGHV3-16A0A0C4DH30 117 aa10.4□□□□□ -0.74
LIMD1-202ENST00000440097 SCGB1C2P0DMR2 95 aa10.4□□□□□ -0.74
LIMD1-202ENST00000440097 DEFB104AQ8WTQ1 72 aa10.4□□□□□ -0.74
LIMD1-202ENST00000440097 TRRAPQ9Y4A5 3859 aa10.4□□□□□ -0.75
LIMD1-202ENST00000440097 IGLV4-69A0A075B6H9 119 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 ZFAND6Q6FIF0 208 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 IGHV3-30P01768 117 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 IGHV3-30-5P0DP03 117 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 C16orf95Q9H693 158 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 VWFP04275 2813 aa10.39□□□□□ -0.75
LIMD1-202ENST00000440097 TRAV2A0A0B4J234 112 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 TSPEAR-AS2P59090 65 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 ZNF876PQ49A33 203 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 C10orf126Q8N4M7 172 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 TSHBP01222 138 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 HERVK_113P61574 105 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 ZNF56Q15929 161 aa10.38□□□□□ -0.75
LIMD1-202ENST00000440097 TRGV11A0A075B6L2 103 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 INAFM1C9JVW0 142 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 PRM2P04554 102 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1A1P0DJD3 496 aaKnown RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1CP0DJD4 496 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1FQ15415 496 aaKnown RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1BA6NDE4 496 aaKnown RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1EA6NEQ0 496 aaKnown RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 RBMY1DP0C7P1 496 aaKnown RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 NXPH4O95158 308 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 STHQ8IWL8 128 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 C9orf85Q96MD7 179 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 PRO1854Q9UHT4 67 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 TP53TG1Q9Y2A0 90 aa10.37□□□□□ -0.75
LIMD1-202ENST00000440097 ZNF256Q9Y2P7 627 aaPredicted RBP10.37□□□□□ -0.75
LIMD1-202ENST00000440097 TMEM262E9PQX1 116 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 SLC25A29Q8N8R3 303 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 CITED1Q99966 193 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 IGHV3OR16-12A0A075B7B8 117 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 SLC25A20O43772 301 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 PPP1R17O96001 155 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 GAGE5Q13069 117 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 GAGE6Q13070 117 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 SUMO4Q6EEV6 95 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 LINC01587Q99440 93 aa10.36□□□□□ -0.75
LIMD1-202ENST00000440097 C9JAW5 83 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 TRPT1Q86TN4 253 aaKnown RBP10.35□□□□□ -0.75
LIMD1-202ENST00000440097 XCL2Q9UBD3 114 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 B5MCH6 92 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 ODF3L2Q3SX64 289 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 TMEM170BQ5T4T1 132 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 KIF25-AS1Q9Y6Z4 181 aa10.35□□□□□ -0.75
LIMD1-202ENST00000440097 STAB1Q9NY15 2570 aa10.34□□□□□ -0.75
LIMD1-202ENST00000440097 NHLRC4P0CG21 123 aaPredicted RBP10.34□□□□□ -0.75
LIMD1-202ENST00000440097 RPL39P62891 51 aaKnown RBP10.34□□□□□ -0.75
LIMD1-202ENST00000440097 PMVKQ15126 192 aa10.34□□□□□ -0.75
LIMD1-202ENST00000440097 TRAV25A0A0B4J276 109 aa10.34□□□□□ -0.75
LIMD1-202ENST00000440097 IGIPA6NJ69 53 aa10.34□□□□□ -0.75
LIMD1-202ENST00000440097 PAPPA-AS1Q5QFB9 102 aa10.34□□□□□ -0.75
LIMD1-202ENST00000440097 IGHV3-73A0A0B4J1V6 119 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 LINC00315P59091 139 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 H7C2G1 150 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 INSP01308 110 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 PROK1P58294 105 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 ZNRF2Q8NHG8 242 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 AMELXQ99217 191 aa10.33□□□□□ -0.76
LIMD1-202ENST00000440097 EIF4EBP3O60516 100 aaPredicted RBP10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 114 ms