RNA–Protein interactions for RNA: ENST00000438254.1

CUBN-204, Transcript of cubilin, humanhuman

TSL 3

Gene CUBN, Length 599 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUBN-204ENST00000438254 A0A096LNJ9 63 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 DEFB131BA0A096LNP1 70 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 TRAV10A0A0B4J240 114 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 LOC389332A0A1B0GUA5 103 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 GAGE12JA6NER3 117 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 C5orf52A6NGY3 159 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 VCYO14598 125 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 SERF1AO75920 110 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 TSHBP01222 138 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 LINC00614P0C842 121 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 GYPEP15421 78 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 HTN3P15516 51 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 NDUFA6P56556 154 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 RPL36AP83881 106 aaKnown RBP6.74□□□□□ -1.33
CUBN-204ENST00000438254 GAGE1Q13065 139 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 GAGE4Q13068 117 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 GAGE5Q13069 117 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 GAGE13Q4V321 117 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 NEGR1Q7Z3B1 354 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 RPL36ALQ969Q0 106 aaKnown RBP6.74□□□□□ -1.33
CUBN-204ENST00000438254 CHCHD1Q96BP2 118 aaKnown RBP6.74□□□□□ -1.33
CUBN-204ENST00000438254 TMA7Q9Y2S6 64 aaKnown RBP6.74□□□□□ -1.33
CUBN-204ENST00000438254 TNFRSF18Q9Y5U5 241 aa6.74□□□□□ -1.33
CUBN-204ENST00000438254 A0A096LPF7 62 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 A0A0J9YY99 117 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 K7EMI3 77 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 PMCHP20382 165 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 NTM-AS1Q6ZSK4 140 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 DAZ4Q86SG3 579 aaKnown RBP6.73□□□□□ -1.33
CUBN-204ENST00000438254 BAGE3Q86Y29 109 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 PRSS3P2Q8NHM4 247 aa6.73□□□□□ -1.33
CUBN-204ENST00000438254 DAZ3Q9NR90 486 aaKnown RBP6.73□□□□□ -1.33
CUBN-204ENST00000438254 IFITM10A6NMD0 228 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 I3L3M4 83 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 TCAPO15273 167 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 HIST3H2BBQ8N257 126 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 PHLDA1Q8WV24 401 aaPredicted RBP6.72□□□□□ -1.33
CUBN-204ENST00000438254 KRTAP9-3Q9BYQ3 159 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 GTSF1LQ9H1H1 148 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 AP5S1Q9NUS5 200 aa6.72□□□□□ -1.33
CUBN-204ENST00000438254 IGHV3-38A0A0C4DH36 116 aa6.71□□□□□ -1.34
CUBN-204ENST00000438254 SNRPEP62304 92 aaKnown RBP6.71□□□□□ -1.34
CUBN-204ENST00000438254 RNASEKQ6P5S7 137 aaKnown RBP6.71□□□□□ -1.34
CUBN-204ENST00000438254 FA2HQ7L5A8 372 aa6.71□□□□□ -1.34
CUBN-204ENST00000438254 KIR2DL4Q99706 377 aa6.71□□□□□ -1.34
CUBN-204ENST00000438254 CHCHD7Q9BUK0 85 aa6.71□□□□□ -1.34
CUBN-204ENST00000438254 IGHV1-24A0A0C4DH33 117 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 S100A6P06703 90 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 TIRAPP58753 221 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 LAGE3Q14657 143 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 MRPL23Q16540 153 aaKnown RBP6.7□□□□□ -1.34
CUBN-204ENST00000438254 ORMDL2Q53FV1 153 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 ATP6V0E2Q8NHE4 81 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 PACRGQ96M98 296 aaPredicted RBP6.7□□□□□ -1.34
CUBN-204ENST00000438254 ICOSQ9Y6W8 199 aa6.7□□□□□ -1.34
CUBN-204ENST00000438254 HSBP1O75506 76 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 FCER1GP30273 86 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 COTL1Q14019 142 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 PDZD11Q5EBL8 140 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 SH2D6Q7Z4S9 175 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 FAM19A2Q8N3H0 131 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 DEFB104AQ8WTQ1 72 aa6.69□□□□□ -1.34
CUBN-204ENST00000438254 TRBV6-8A0A0A6YYG3 113 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 PMCHL1Q16048 86 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 CEMP1Q6PRD7 247 aaPredicted RBP6.68□□□□□ -1.34
CUBN-204ENST00000438254 C15orf53Q8NAA6 179 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 C20orf203Q8NBC4 194 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 TOMM6Q96B49 74 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 HIST1H2BLQ99880 126 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 KRTAP17-1Q9BYP8 105 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 CSMD3Q7Z407 3707 aa6.68□□□□□ -1.34
CUBN-204ENST00000438254 STARD9Q9P2P6 4700 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 HBDP02042 147 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 AMTP48728 403 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 TMEM97Q5BJF2 176 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 LYPD5Q6UWN5 251 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 C2orf66Q6UXQ4 117 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 FAM104AQ969W3 186 aa6.67□□□□□ -1.34
CUBN-204ENST00000438254 PLECQ15149 4684 aaKnown RBP6.67□□□□□ -1.34
CUBN-204ENST00000438254 IGIPA6NJ69 53 aa6.66□□□□□ -1.34
CUBN-204ENST00000438254 NUDT3O95989 172 aa6.66□□□□□ -1.34
CUBN-204ENST00000438254 RPL39P62891 51 aaKnown RBP6.66□□□□□ -1.34
CUBN-204ENST00000438254 LELP1Q5T871 98 aa6.66□□□□□ -1.34
CUBN-204ENST00000438254 LINC00173Q6ZV60 143 aa6.66□□□□□ -1.34
CUBN-204ENST00000438254 APLNQ9ULZ1 77 aa6.66□□□□□ -1.34
CUBN-204ENST00000438254 TRBV25-1A0A075B6N4 114 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 NUPR2A6NF83 97 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 LINC01549A6NIU2 74 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 H7C423 109 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 BTF3P20290 206 aaKnown RBP6.65□□□□□ -1.34
CUBN-204ENST00000438254 ESRGQ1W209 222 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 MRPL52Q86TS9 123 aaKnown RBP6.65□□□□□ -1.34
CUBN-204ENST00000438254 TMEM243Q9BU79 118 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 TIMM21Q9BVV7 248 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 CYSLTR1Q9Y271 337 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 UBE2D4Q9Y2X8 147 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 PYGO1Q9Y3Y4 419 aa6.65□□□□□ -1.34
CUBN-204ENST00000438254 CSDC2Q9Y534 153 aaKnown RBP6.65□□□□□ -1.34
CUBN-204ENST00000438254 IGKV2D-29A0A075B6S2 120 aaPredicted RBP6.64□□□□□ -1.35
CUBN-204ENST00000438254 LOC105371267A0A1B0GV96 52 aa6.64□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms