RNA–Protein interactions for RNA: ENST00000437564.5

MCF2-205, Transcript of MCF.2 cell line derived transforming sequence, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene MCF2, Length 1,988 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCF2-205ENST00000437564 BBC3Q96PG8 261 aaPredicted RBP4.62□□□□□ -1.67
MCF2-205ENST00000437564 ORMDL1Q9P0S3 153 aa4.62□□□□□ -1.67
MCF2-205ENST00000437564 KNTC1P50748 2209 aa4.61□□□□□ -1.67
MCF2-205ENST00000437564 IGLV3-12A0A075B6K2 115 aa4.61□□□□□ -1.67
MCF2-205ENST00000437564 IGHV6-1A0A0B4J1U7 121 aa4.61□□□□□ -1.67
MCF2-205ENST00000437564 C18orf65Q6ZTR6 163 aa4.61□□□□□ -1.67
MCF2-205ENST00000437564 Q6ZSV7 163 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 GGNQ86UU5 652 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 FAM218AQ96MZ4 157 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 FGF23Q9GZV9 251 aaPredicted RBP4.6□□□□□ -1.67
MCF2-205ENST00000437564 NDUFA4L2Q9NRX3 87 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 TRAV21A0A0B4J279 112 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 A0A0J9YXV3 536 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 C19orf84I3L1E1 186 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 K7EQG2 157 aa4.6□□□□□ -1.67
MCF2-205ENST00000437564 LINC01547P58512 204 aaPredicted RBP4.6□□□□□ -1.67
MCF2-205ENST00000437564 ZNF706Q9Y5V0 76 aaPredicted RBP4.6□□□□□ -1.67
MCF2-205ENST00000437564 MUC22E2RYF6 1773 aaPredicted RBP4.6□□□□□ -1.67
MCF2-205ENST00000437564 MED13Q9UHV7 2174 aa4.59□□□□□ -1.67
MCF2-205ENST00000437564 BPY2O14599 106 aa4.59□□□□□ -1.67
MCF2-205ENST00000437564 PLA2G1BP04054 148 aaKnown RBP4.59□□□□□ -1.67
MCF2-205ENST00000437564 LINC00308Q8TCZ7 52 aa4.59□□□□□ -1.67
MCF2-205ENST00000437564 DSCAML1Q8TD84 2053 aa4.59□□□□□ -1.68
MCF2-205ENST00000437564 IGHV1-18A0A0C4DH31 117 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 FLVCR1-AS1Q8TAF5 88 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 PLXNB1O43157 2135 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 LOC101927531A0A1B0GV80 90 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 IGKV3-11P04433 115 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 MIR7-3HGQ8N6C7 128 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 C9orf106Q8NAJ2 232 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 CDC42SE2Q9NRR3 84 aa4.58□□□□□ -1.68
MCF2-205ENST00000437564 ARFGEF3Q5TH69 2177 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 IGLV3-9A0A075B6K5 115 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 IGHV4OR15-8A0A075B7B6 117 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 A0A087WW49 117 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 A6NED7 52 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 NCR3O14931 201 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 NDUFA1O15239 70 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 ZNHIT1O43257 154 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 ZNF32P17041 273 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 PDE6GP18545 87 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 ELOF1P60002 83 aaKnown RBP4.57□□□□□ -1.68
MCF2-205ENST00000437564 NDPQ00604 133 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 HCP5Q6MZN7 132 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 ARHGAP32A7KAX9 2087 aa4.57□□□□□ -1.68
MCF2-205ENST00000437564 DIDO1Q9BTC0 2240 aaKnown RBP4.57□□□□□ -1.68
MCF2-205ENST00000437564 A8MU10 97 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 H3BRN7 92 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 MOBPQ13875 183 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 LINC00574Q9H8X3 128 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 SAA2P0DJI9 122 aaPredicted RBP4.56□□□□□ -1.68
MCF2-205ENST00000437564 C9orf129Q5T035 196 aaKnown RBP4.56□□□□□ -1.68
MCF2-205ENST00000437564 LINC00167Q96N53 147 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 OCR1Q9BZK8 76 aa4.56□□□□□ -1.68
MCF2-205ENST00000437564 IGHV1OR15-1A0A075B7D0 117 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 LOC110117498A0A087WWA1 95 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 IGHV7-4-1A0A0J9YVY3 117 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 LCE6AA0A183 80 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 NDUFB1O75438 58 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 CACNA1IQ9P0X4 2223 aa4.55□□□□□ -1.68
MCF2-205ENST00000437564 A0A1B0GW54 56 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 LRCOL1A6NCL2 159 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 POLR2KP53803 58 aaKnown RBP4.54□□□□□ -1.68
MCF2-205ENST00000437564 LYZP61626 148 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 RPL39P5Q59GN2 51 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 CASC2Q6XLA1 102 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 Q8N9P0 234 aaPredicted RBP4.54□□□□□ -1.68
MCF2-205ENST00000437564 NOTCH4Q99466 2003 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 A0A0C4DFX4 3053 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 H3BQ85 93 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 CRPP02741 224 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 PRB4P10163 310 aaPredicted RBP4.54□□□□□ -1.68
MCF2-205ENST00000437564 GNLYP22749 145 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 HAMPP81172 84 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 MAP6D1Q9H9H5 199 aa4.54□□□□□ -1.68
MCF2-205ENST00000437564 IGHV3-64A0A075B6Q5 118 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 IGHV3-43A0A0B4J1X8 118 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 TRBV6-5A0A0K0K1A5 114 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 DEFB108AA8MXU0 73 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 IGHV3-43DP0DP04 118 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 RPL27AP46776 148 aaKnown RBP4.53□□□□□ -1.68
MCF2-205ENST00000437564 ZGRF1Q86YA3 2104 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 ZNRF1Q8ND25 227 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 TMEM167AQ8TBQ9 72 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 PRR15LQ9BU68 103 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 CELA1Q9UNI1 258 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 A0A087WYN8 130 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 IGKV3D-20A0A0C4DH25 116 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 LY6HO94772 140 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 B3GALT5-AS1P59052 145 aa4.53□□□□□ -1.68
MCF2-205ENST00000437564 RPL39LQ96EH5 51 aaKnown RBP4.53□□□□□ -1.68
MCF2-205ENST00000437564 TRBV10-1A0A0K0K1A3 114 aa4.52□□□□□ -1.69
MCF2-205ENST00000437564 WT1-ASQ06250 92 aa4.52□□□□□ -1.69
MCF2-205ENST00000437564 FAM74A4Q5TZK3 123 aa4.52□□□□□ -1.69
MCF2-205ENST00000437564 Q9BRP9 147 aa4.52□□□□□ -1.69
MCF2-205ENST00000437564 ZNF407Q9C0G0 2248 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 IGKV2-40A0A087WW87 121 aaPredicted RBP4.51□□□□□ -1.69
MCF2-205ENST00000437564 IGKV2-29A2NJV5 120 aaPredicted RBP4.51□□□□□ -1.69
MCF2-205ENST00000437564 F5H697 171 aa4.51□□□□□ -1.69
MCF2-205ENST00000437564 IGKV2D-40P01614 121 aaPredicted RBP4.51□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 55.3 ms