RNA–Protein interactions for RNA: ENST00000435497.1

LINC00028-201, long intergenic non-protein coding RNA 28, humanhuman

TSL 2 BASIC

Gene LINC00028, Length 587 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00028-201ENST00000435497 IGKV2-24A0A0C4DH68 120 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 GAGE12HA6NDE8 117 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 TEX46H3BTG2 121 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 NDUFS6O75380 124 aaKnown RBP8.48□□□□□ -1.05
LINC00028-201ENST00000435497 HIGD2BQ4VC39 106 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 EIF5AL1Q6IS14 154 aaKnown RBP8.48□□□□□ -1.05
LINC00028-201ENST00000435497 STPG4Q8N801 248 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 LYPD6BQ8NI32 183 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 GNG13Q9P2W3 67 aa8.48□□□□□ -1.05
LINC00028-201ENST00000435497 H7C1H1 209 aa8.47□□□□□ -1.05
LINC00028-201ENST00000435497 RASL11AQ6T310 242 aa8.47□□□□□ -1.05
LINC00028-201ENST00000435497 PGLYRP4Q96LB8 373 aa8.47□□□□□ -1.05
LINC00028-201ENST00000435497 LPAP08519 4548 aa8.46□□□□□ -1.05
LINC00028-201ENST00000435497 RPL35P42766 123 aaKnown RBP8.46□□□□□ -1.06
LINC00028-201ENST00000435497 SULT1A2P50226 295 aa8.46□□□□□ -1.06
LINC00028-201ENST00000435497 CCL20P78556 96 aa8.46□□□□□ -1.06
LINC00028-201ENST00000435497 SRSF9Q13242 221 aaKnown RBP eCLIP8.46□□□□□ -1.06
LINC00028-201ENST00000435497 CFAP161Q6P656 301 aa8.46□□□□□ -1.06
LINC00028-201ENST00000435497 MANBALQ9NQG1 85 aa8.46□□□□□ -1.06
LINC00028-201ENST00000435497 NIT2Q9NQR4 276 aa8.46□□□□□ -1.06
LINC00028-201ENST00000435497 A0A096LNI7 61 aa8.45□□□□□ -1.06
LINC00028-201ENST00000435497 SPINK6Q6UWN8 80 aa8.45□□□□□ -1.06
LINC00028-201ENST00000435497 FER1L6-AS1Q8NA97 138 aa8.45□□□□□ -1.06
LINC00028-201ENST00000435497 TPPP3Q9BW30 176 aa8.45□□□□□ -1.06
LINC00028-201ENST00000435497 TRAV1-1A0A0B4J248 108 aa8.44□□□□□ -1.06
LINC00028-201ENST00000435497 IGKV3OR2-268A0A0C4DH90 116 aa8.44□□□□□ -1.06
LINC00028-201ENST00000435497 UBE2L6O14933 153 aa8.44□□□□□ -1.06
LINC00028-201ENST00000435497 GAS8-AS1O95177 125 aa8.44□□□□□ -1.06
LINC00028-201ENST00000435497 AMTP48728 403 aa8.44□□□□□ -1.06
LINC00028-201ENST00000435497 RPS20P60866 119 aaKnown RBP8.44□□□□□ -1.06
LINC00028-201ENST00000435497 GVQW2A0A096LPI5 108 aaPredicted RBP8.43□□□□□ -1.06
LINC00028-201ENST00000435497 C19orf71A6NCJ1 209 aa8.43□□□□□ -1.06
LINC00028-201ENST00000435497 CACNG7P62955 275 aa8.43□□□□□ -1.06
LINC00028-201ENST00000435497 COTL1Q14019 142 aa8.43□□□□□ -1.06
LINC00028-201ENST00000435497 OR2D3Q8NGH3 330 aa8.43□□□□□ -1.06
LINC00028-201ENST00000435497 CHCHD10Q8WYQ3 142 aaPredicted RBP8.43□□□□□ -1.06
LINC00028-201ENST00000435497 XKRY2A2RUG3 117 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 IFNA1P01562 189 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 GNG4P50150 75 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 CENPWQ5EE01 88 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 REG3GQ6UW15 175 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 LYZL1Q6UWQ5 148 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 C11orf52Q96A22 123 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 MED9Q9NWA0 146 aa8.42□□□□□ -1.06
LINC00028-201ENST00000435497 RAB19A4D1S5 217 aa8.41□□□□□ -1.06
LINC00028-201ENST00000435497 PDE6DO43924 150 aa8.41□□□□□ -1.06
LINC00028-201ENST00000435497 NTF3P20783 257 aa8.41□□□□□ -1.06
LINC00028-201ENST00000435497 FOXI1Q12951 378 aa8.41□□□□□ -1.06
LINC00028-201ENST00000435497 BIN3Q9NQY0 253 aa8.41□□□□□ -1.06
LINC00028-201ENST00000435497 F2Z2F3 143 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 TRGC1P0CF51 173 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 MEF2BQ02080 365 aaPredicted RBP8.4□□□□□ -1.06
LINC00028-201ENST00000435497 Q6ZNX1 250 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 GATD1Q8NB37 220 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 SMIM12Q96EX1 92 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 LINC00526Q96FQ7 95 aa8.4□□□□□ -1.06
LINC00028-201ENST00000435497 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.38□□□□□ -1.07
LINC00028-201ENST00000435497 TRAV26-2A0A0B4J265 109 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 IGKV2-29A2NJV5 120 aaPredicted RBP8.38□□□□□ -1.07
LINC00028-201ENST00000435497 Q6ZRP5 223 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 SLC51BQ86UW2 128 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 TCTE3Q8IZS6 198 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 C9orf62Q8N4C0 152 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 LINC00474Q9P2X8 69 aa8.38□□□□□ -1.07
LINC00028-201ENST00000435497 FGF6P10767 208 aa8.37□□□□□ -1.07
LINC00028-201ENST00000435497 TAGLN2P37802 199 aaKnown RBP8.37□□□□□ -1.07
LINC00028-201ENST00000435497 AMMECR1LQ6DCA0 310 aa8.37□□□□□ -1.07
LINC00028-201ENST00000435497 RNASEKQ6P5S7 137 aaKnown RBP8.37□□□□□ -1.07
LINC00028-201ENST00000435497 RPL39LQ96EH5 51 aaKnown RBP8.37□□□□□ -1.07
LINC00028-201ENST00000435497 TRBV20OR9-2A0A075B6H5 130 aa8.36□□□□□ -1.07
LINC00028-201ENST00000435497 BCL2P10415 239 aa8.36□□□□□ -1.07
LINC00028-201ENST00000435497 LINC00959A0A1B0GUT2 108 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 FAM231BA6NCW3 169 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 H7C423 109 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 NCR2O95944 276 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 CTRLP40313 264 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 XCL1P47992 114 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 FOXA3P55318 350 aaPredicted RBP8.35□□□□□ -1.07
LINC00028-201ENST00000435497 TWIST1Q15672 202 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 NUDT10Q8NFP7 164 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 OR5A1Q8NGJ0 315 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 NUDT11Q96G61 164 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 CARD19Q96LW7 228 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 CNFNQ9BYD5 112 aa8.35□□□□□ -1.07
LINC00028-201ENST00000435497 IGHV1-58A0A0C4DH39 117 aa8.34□□□□□ -1.07
LINC00028-201ENST00000435497 A0A1W2PNN7 141 aa8.34□□□□□ -1.07
LINC00028-201ENST00000435497 CCL25O15444 150 aa8.34□□□□□ -1.07
LINC00028-201ENST00000435497 APCSP02743 223 aa8.33□□□□□ -1.08
LINC00028-201ENST00000435497 PTTG1IPP53801 180 aa8.33□□□□□ -1.08
LINC00028-201ENST00000435497 SYCNQ0VAF6 134 aa8.33□□□□□ -1.08
LINC00028-201ENST00000435497 SDHAF1A6NFY7 115 aa8.32□□□□□ -1.08
LINC00028-201ENST00000435497 ZNF25P17030 456 aaPredicted RBP8.32□□□□□ -1.08
LINC00028-201ENST00000435497 BLOC1S1P78537 153 aa8.32□□□□□ -1.08
LINC00028-201ENST00000435497 SMIM15Q7Z3B0 74 aa8.32□□□□□ -1.08
LINC00028-201ENST00000435497 OCC1Q8TAD7 63 aa8.32□□□□□ -1.08
LINC00028-201ENST00000435497 ESDP10768 282 aa8.31□□□□□ -1.08
LINC00028-201ENST00000435497 GAGE2BQ13066 116 aa8.31□□□□□ -1.08
LINC00028-201ENST00000435497 RNASE7Q9H1E1 156 aaKnown RBP8.31□□□□□ -1.08
LINC00028-201ENST00000435497 RPP21Q9H633 154 aaKnown RBP8.31□□□□□ -1.08
LINC00028-201ENST00000435497 PKIGQ9Y2B9 76 aa8.31□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 33.9 ms