RNA–Protein interactions for RNA: ENST00000434658.6

FAM3A-212, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 5

Gene FAM3A, Length 1,817 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-212ENST00000434658 VWFP04275 2813 aa13.51□□□□□ -0.25
FAM3A-212ENST00000434658 HIST1H4GQ99525 98 aa13.51□□□□□ -0.25
FAM3A-212ENST00000434658 NHP2Q9NX24 153 aaKnown RBP13.51□□□□□ -0.25
FAM3A-212ENST00000434658 PKD1L1Q8TDX9 2849 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 GAGE12BA1L429 117 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 P0DMU3 169 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 FAM231AP0DMU4 169 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 FAM231CP0DMU5 169 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 HERVK_113P61574 105 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 ZNF415Q09FC8 603 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 SAMD5Q5TGI4 173 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 WFDC9Q8NEX5 89 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 M0R2P5 195 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 CD300EQ496F6 205 aaPredicted RBP13.5□□□□□ -0.25
FAM3A-212ENST00000434658 LINC00482Q8N8I6 264 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 C20orf203Q8NBC4 194 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 CLUHP3Q96NS8 147 aa13.5□□□□□ -0.25
FAM3A-212ENST00000434658 A8MWV9 139 aa13.49□□□□□ -0.25
FAM3A-212ENST00000434658 K7ERJ3 54 aa13.49□□□□□ -0.25
FAM3A-212ENST00000434658 FABP2P12104 132 aa13.49□□□□□ -0.25
FAM3A-212ENST00000434658 HTN1P15515 57 aa13.49□□□□□ -0.25
FAM3A-212ENST00000434658 FHL3Q13643 280 aa13.49□□□□□ -0.25
FAM3A-212ENST00000434658 TRAV25A0A0B4J276 109 aa13.48□□□□□ -0.25
FAM3A-212ENST00000434658 ZNF815PA8K554 130 aa13.48□□□□□ -0.25
FAM3A-212ENST00000434658 OR5A1Q8NGJ0 315 aa13.48□□□□□ -0.25
FAM3A-212ENST00000434658 SPCS1Q9Y6A9 102 aa13.48□□□□□ -0.25
FAM3A-212ENST00000434658 NACAE9PAV3 2078 aa13.47□□□□□ -0.25
FAM3A-212ENST00000434658 EMP1P54849 157 aa13.47□□□□□ -0.25
FAM3A-212ENST00000434658 RBX1P62877 108 aa13.47□□□□□ -0.25
FAM3A-212ENST00000434658 NFE4Q86UQ8 179 aa13.47□□□□□ -0.25
FAM3A-212ENST00000434658 A0A1B0GWB2 263 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 INSP01308 110 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 C12orf74Q32Q52 190 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 C11orf72Q8NBR9 251 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 ZNRF2Q8NHG8 242 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 CBY1Q9Y3M2 126 aa13.46□□□□□ -0.25
FAM3A-212ENST00000434658 MGAM2Q2M2H8 2515 aa13.45□□□□□ -0.26
FAM3A-212ENST00000434658 IGHV3-73A0A0B4J1V6 119 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 G3V4G9 280 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 PRM2P04554 102 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 ODF3L2Q3SX64 289 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 OCIAD2Q56VL3 154 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 OXLD1Q5BKU9 147 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 LINC01587Q99440 93 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 SPXQ9BT56 116 aa13.44□□□□□ -0.26
FAM3A-212ENST00000434658 IGLL5B9A064 214 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 TMEM170BQ5T4T1 132 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 SCGB1D4Q6XE38 83 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 PLEKHB2Q96CS7 222 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 IGLV4-3A0A075B6K6 122 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 RHODO00212 210 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 BEAN1Q3B7T3 259 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 CFAP126Q5VTH2 177 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 OPRPNQ99935 248 aaPredicted RBP13.43□□□□□ -0.26
FAM3A-212ENST00000434658 PYGO1Q9Y3Y4 419 aa13.43□□□□□ -0.26
FAM3A-212ENST00000434658 TNFRSF18Q9Y5U5 241 aa13.42□□□□□ -0.26
FAM3A-212ENST00000434658 TSPEAR-AS2P59090 65 aa13.41□□□□□ -0.26
FAM3A-212ENST00000434658 A0A0J9YY99 117 aa13.4□□□□□ -0.26
FAM3A-212ENST00000434658 Q6ZSN1 163 aa13.4□□□□□ -0.26
FAM3A-212ENST00000434658 ZNF479Q96JC4 524 aa13.4□□□□□ -0.26
FAM3A-212ENST00000434658 NBEAL1Q6ZS30 2694 aa13.4□□□□□ -0.26
FAM3A-212ENST00000434658 FBN3Q75N90 2809 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 TMEM223A0PJW6 202 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 RS1O15537 224 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 CRYBA4P53673 196 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 STHQ8IWL8 128 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 VCX2Q9H322 139 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 TMEM238LA0A1B0GVL6 79 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 A6NJY4 79 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 IGHV3-53P01767 116 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 RRN3P1Q2M238 152 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 DNAJC30Q96LL9 226 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 AMELXQ99217 191 aa13.39□□□□□ -0.27
FAM3A-212ENST00000434658 SPANXB1Q9NS25 103 aaPredicted RBP13.39□□□□□ -0.27
FAM3A-212ENST00000434658 MRPL16Q9NX20 251 aaKnown RBP13.39□□□□□ -0.27
FAM3A-212ENST00000434658 J3QQQ9 107 aa13.38□□□□□ -0.27
FAM3A-212ENST00000434658 LEPROTO15243 131 aa13.38□□□□□ -0.27
FAM3A-212ENST00000434658 ZNF22P17026 224 aaPredicted RBP13.38□□□□□ -0.27
FAM3A-212ENST00000434658 XCL2Q9UBD3 114 aa13.38□□□□□ -0.27
FAM3A-212ENST00000434658 K7ERU9 68 aa13.37□□□□□ -0.27
FAM3A-212ENST00000434658 SAP30O75446 220 aa13.37□□□□□ -0.27
FAM3A-212ENST00000434658 SRSF9Q13242 221 aaKnown RBP eCLIP13.37□□□□□ -0.27
FAM3A-212ENST00000434658 FAM104AQ969W3 186 aa13.37□□□□□ -0.27
FAM3A-212ENST00000434658 LGALS3P17931 250 aaKnown RBP13.36□□□□□ -0.27
FAM3A-212ENST00000434658 C9orf66Q5T8R8 295 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 IL17DQ8TAD2 202 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 NOTCH3Q9UM47 2321 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 UBE2D1P51668 147 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 KPRPQ5T749 579 aaPredicted RBP13.36□□□□□ -0.27
FAM3A-212ENST00000434658 C1orf158Q8N1D5 194 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 SLC25A29Q8N8R3 303 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 CHCHD7Q9BUK0 85 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 Q9UF83 564 aa13.36□□□□□ -0.27
FAM3A-212ENST00000434658 A0A0J9YXV3 536 aa13.35□□□□□ -0.27
FAM3A-212ENST00000434658 AZU1P20160 251 aa13.34□□□□□ -0.27
FAM3A-212ENST00000434658 SPANXA1Q9NS26 97 aa13.34□□□□□ -0.27
FAM3A-212ENST00000434658 RNF151Q2KHN1 245 aa13.34□□□□□ -0.27
FAM3A-212ENST00000434658 CMC4P56277 68 aaPredicted RBP13.33□□□□□ -0.28
FAM3A-212ENST00000434658 MRPS36P82909 103 aaKnown RBP13.33□□□□□ -0.28
FAM3A-212ENST00000434658 WIPF1O43516 503 aa13.32□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 32.2 ms