RNA–Protein interactions for RNA: ENST00000433271.6

TMEM248-205, Transcript of transmembrane protein 248, humanhuman

TSL 1 (best)

Gene TMEM248, Length 1,610 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TMEM248-205ENST00000433271 NUDT3O95989 172 aa18.36■□□□□ 0.53
TMEM248-205ENST00000433271 ESDP10768 282 aa18.36■□□□□ 0.53
TMEM248-205ENST00000433271 ORMDL2Q53FV1 153 aa18.36■□□□□ 0.53
TMEM248-205ENST00000433271 CEMP1Q6PRD7 247 aaPredicted RBP18.36■□□□□ 0.53
TMEM248-205ENST00000433271 GTSF1LQ9H1H1 148 aa18.36■□□□□ 0.53
TMEM248-205ENST00000433271 IGLL5B9A064 214 aa18.35■□□□□ 0.53
TMEM248-205ENST00000433271 HSBP1O75506 76 aa18.34■□□□□ 0.53
TMEM248-205ENST00000433271 TMEM97Q5BJF2 176 aa18.34■□□□□ 0.53
TMEM248-205ENST00000433271 NUPR2A6NF83 97 aa18.34■□□□□ 0.53
TMEM248-205ENST00000433271 NTM-AS1Q6ZSK4 140 aa18.34■□□□□ 0.53
TMEM248-205ENST00000433271 SNRPEP62304 92 aaKnown RBP18.32■□□□□ 0.52
TMEM248-205ENST00000433271 C5orf52A6NGY3 159 aa18.31■□□□□ 0.52
TMEM248-205ENST00000433271 TRBV6-8A0A0A6YYG3 113 aa18.31■□□□□ 0.52
TMEM248-205ENST00000433271 AMTP48728 403 aa18.31■□□□□ 0.52
TMEM248-205ENST00000433271 PMCHL1Q16048 86 aa18.3■□□□□ 0.52
TMEM248-205ENST00000433271 KLK5Q9Y337 293 aaPredicted RBP18.3■□□□□ 0.52
TMEM248-205ENST00000433271 IGHV1-24A0A0C4DH33 117 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 G0S2P27469 103 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 TIRAPP58753 221 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 LYPD5Q6UWN5 251 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 FAM19A2Q8N3H0 131 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 WWC2-AS2Q96NR7 200 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 CHCHD7Q9BUK0 85 aa18.29■□□□□ 0.52
TMEM248-205ENST00000433271 TRBV25-1A0A075B6N4 114 aa18.28■□□□□ 0.52
TMEM248-205ENST00000433271 C20orf203Q8NBC4 194 aa18.27■□□□□ 0.52
TMEM248-205ENST00000433271 A0A096LNJ9 63 aa18.27■□□□□ 0.51
TMEM248-205ENST00000433271 HBDP02042 147 aa18.27■□□□□ 0.51
TMEM248-205ENST00000433271 BTF3P20290 206 aaKnown RBP18.27■□□□□ 0.51
TMEM248-205ENST00000433271 PDZD11Q5EBL8 140 aa18.27■□□□□ 0.51
TMEM248-205ENST00000433271 HIST3H2BBQ8N257 126 aa18.27■□□□□ 0.51
TMEM248-205ENST00000433271 MUC7Q8TAX7 377 aa18.26■□□□□ 0.51
TMEM248-205ENST00000433271 TMEM243Q9BU79 118 aa18.25■□□□□ 0.51
TMEM248-205ENST00000433271 DNAH7Q8WXX0 4024 aa18.24■□□□□ 0.51
TMEM248-205ENST00000433271 ESRGQ1W209 222 aa18.24■□□□□ 0.51
TMEM248-205ENST00000433271 C2orf66Q6UXQ4 117 aa18.24■□□□□ 0.51
TMEM248-205ENST00000433271 CYSLTR1Q9Y271 337 aa18.24■□□□□ 0.51
TMEM248-205ENST00000433271 LELP1Q5T871 98 aa18.23■□□□□ 0.51
TMEM248-205ENST00000433271 TOMM6Q96B49 74 aa18.23■□□□□ 0.51
TMEM248-205ENST00000433271 APLNQ9ULZ1 77 aa18.23■□□□□ 0.51
TMEM248-205ENST00000433271 TCTAP57738 103 aa18.23■□□□□ 0.51
TMEM248-205ENST00000433271 TMEM18Q96B42 140 aa18.23■□□□□ 0.51
TMEM248-205ENST00000433271 LINC01549A6NIU2 74 aa18.22■□□□□ 0.51
TMEM248-205ENST00000433271 S100A2P29034 98 aa18.22■□□□□ 0.51
TMEM248-205ENST00000433271 RPL39P62891 51 aaKnown RBP18.22■□□□□ 0.51
TMEM248-205ENST00000433271 IGKV2D-29A0A075B6S2 120 aaPredicted RBP18.21■□□□□ 0.51
TMEM248-205ENST00000433271 IGKV2-29A2NJV5 120 aaPredicted RBP18.21■□□□□ 0.51
TMEM248-205ENST00000433271 PACRGQ96M98 296 aaPredicted RBP18.21■□□□□ 0.51
TMEM248-205ENST00000433271 H7C423 109 aa18.2■□□□□ 0.5
TMEM248-205ENST00000433271 ZFAND6Q6FIF0 208 aa18.2■□□□□ 0.5
TMEM248-205ENST00000433271 CHCHD5Q9BSY4 110 aa18.2■□□□□ 0.5
TMEM248-205ENST00000433271 UBE2L6O14933 153 aa18.19■□□□□ 0.5
TMEM248-205ENST00000433271 CSMD3Q7Z407 3707 aa18.19■□□□□ 0.5
TMEM248-205ENST00000433271 DYNC2H1Q8NCM8 4307 aaKnown RBP18.18■□□□□ 0.5
TMEM248-205ENST00000433271 LEPROTL1O95214 131 aa18.18■□□□□ 0.5
TMEM248-205ENST00000433271 CCL18P55774 89 aa18.17■□□□□ 0.5
TMEM248-205ENST00000433271 HIST1H2BLQ99880 126 aa18.17■□□□□ 0.5
TMEM248-205ENST00000433271 TRAV8-6A0A0B4J262 113 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 IFITM10A6NMD0 228 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 FABP4P15090 132 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 SCGB3A1Q96QR1 104 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 ERASQ7Z444 233 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 MRPL52Q86TS9 123 aaKnown RBP18.16■□□□□ 0.5
TMEM248-205ENST00000433271 UBE2D4Q9Y2X8 147 aa18.16■□□□□ 0.5
TMEM248-205ENST00000433271 IGIPA6NJ69 53 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 FGF6P10767 208 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 SMAGPQ0VAQ4 97 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 GAGE6Q13070 117 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 TIMM21Q9BVV7 248 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 HSPB8Q9UJY1 196 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 PYGO1Q9Y3Y4 419 aa18.15■□□□□ 0.5
TMEM248-205ENST00000433271 SPANXA1Q9NS26 97 aa18.14■□□□□ 0.49
TMEM248-205ENST00000433271 ATP5LO75964 103 aa18.13■□□□□ 0.49
TMEM248-205ENST00000433271 LINC00588Q9Y4M8 146 aa18.13■□□□□ 0.49
TMEM248-205ENST00000433271 CSDC2Q9Y534 153 aaKnown RBP18.13■□□□□ 0.49
TMEM248-205ENST00000433271 TMEM262E9PQX1 116 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 AMMECR1LQ6DCA0 310 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 TIMM17AQ99595 171 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 MRPS16Q9Y3D3 137 aaKnown RBP18.12■□□□□ 0.49
TMEM248-205ENST00000433271 TENM2Q9NT68 2774 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 PKIAP61925 76 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 LINC00173Q6ZV60 143 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 TMEM141Q96I45 108 aa18.12■□□□□ 0.49
TMEM248-205ENST00000433271 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP18.11■□□□□ 0.49
TMEM248-205ENST00000433271 ZNF25P17030 456 aaPredicted RBP18.11■□□□□ 0.49
TMEM248-205ENST00000433271 DGAT2L7PQ6IED9 249 aa18.1■□□□□ 0.49
TMEM248-205ENST00000433271 IFI27L1Q96BM0 104 aa18.1■□□□□ 0.49
TMEM248-205ENST00000433271 A0A1B0GUV1 79 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 NPSP0C0P6 89 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 C3orf84H3BNL1 204 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 WFDC10BQ8IUB3 73 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 OR5A1Q8NGJ0 315 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 TMEM101Q96IK0 257 aa18.09■□□□□ 0.49
TMEM248-205ENST00000433271 A0A087WX48 190 aa18.08■□□□□ 0.48
TMEM248-205ENST00000433271 MPV17L2Q567V2 206 aa18.08■□□□□ 0.48
TMEM248-205ENST00000433271 UPK3BQ9BT76 320 aa18.08■□□□□ 0.48
TMEM248-205ENST00000433271 RBX1P62877 108 aa18.07■□□□□ 0.48
TMEM248-205ENST00000433271 MRPS36P82909 103 aaKnown RBP18.07■□□□□ 0.48
TMEM248-205ENST00000433271 FAM104AQ969W3 186 aa18.07■□□□□ 0.48
TMEM248-205ENST00000433271 OPRPNQ99935 248 aaPredicted RBP18.07■□□□□ 0.48
TMEM248-205ENST00000433271 IGLV4-3A0A075B6K6 122 aa18.06■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 90.5 ms