RNA–Protein interactions for RNA: ENST00000432057.2

VRK2-205, Transcript of vaccinia related kinase 2, humanhuman

TSL 1 (best)

Gene VRK2, Length 1,870 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VRK2-205ENST00000432057 BVES-AS1Q5T3Y7 98 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 GAGE12BA1L429 117 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 GAGE7O76087 117 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 GAGE12FP0CL80 117 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 GAGE12GP0CL81 117 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 GAGE12IP0CL82 117 aa13.99□□□□□ -0.17
VRK2-205ENST00000432057 C11orf86A6NJI1 115 aa13.98□□□□□ -0.17
VRK2-205ENST00000432057 K7EQD1 137 aa13.98□□□□□ -0.17
VRK2-205ENST00000432057 LURAP1LQ8IV03 231 aa13.98□□□□□ -0.17
VRK2-205ENST00000432057 OVOL2Q9BRP0 275 aa13.98□□□□□ -0.17
VRK2-205ENST00000432057 C12orf54Q6X4T0 127 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 CHCHD7Q9BUK0 85 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 ZMAT5Q9UDW3 170 aaKnown RBP13.97□□□□□ -0.17
VRK2-205ENST00000432057 IGLV4-3A0A075B6K6 122 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 SIVA1O15304 175 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 TMEM97Q5BJF2 176 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 ZNRF2Q8NHG8 242 aa13.97□□□□□ -0.17
VRK2-205ENST00000432057 TRGV2A0A075B6R0 118 aa13.96□□□□□ -0.17
VRK2-205ENST00000432057 TRAV8-6A0A0B4J262 113 aa13.95□□□□□ -0.18
VRK2-205ENST00000432057 COTL1Q14019 142 aa13.95□□□□□ -0.18
VRK2-205ENST00000432057 MAPKAPK5-AS1Q8N8E1 139 aa13.95□□□□□ -0.18
VRK2-205ENST00000432057 CEMP1Q6PRD7 247 aaPredicted RBP13.95□□□□□ -0.18
VRK2-205ENST00000432057 SLC25A29Q8N8R3 303 aa13.95□□□□□ -0.18
VRK2-205ENST00000432057 IGKV2D-29A0A075B6S2 120 aaPredicted RBP13.94□□□□□ -0.18
VRK2-205ENST00000432057 IGKV2-29A2NJV5 120 aaPredicted RBP13.94□□□□□ -0.18
VRK2-205ENST00000432057 KRTAP24-1Q3LI83 254 aa13.94□□□□□ -0.18
VRK2-205ENST00000432057 TRBV7-3A0A075B6L6 115 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 TRBV10-1A0A0K0K1A3 114 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 PAPPA-AS1Q5QFB9 102 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 WFDC9Q8NEX5 89 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 FAM104AQ969W3 186 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 PYGO1Q9Y3Y4 419 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 TRRAPQ9Y4A5 3859 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 ZNF25P17030 456 aaPredicted RBP13.93□□□□□ -0.18
VRK2-205ENST00000432057 RPL36AP83881 106 aaKnown RBP13.93□□□□□ -0.18
VRK2-205ENST00000432057 OR11H2Q8NH07 326 aa13.93□□□□□ -0.18
VRK2-205ENST00000432057 RPL36ALQ969Q0 106 aaKnown RBP13.93□□□□□ -0.18
VRK2-205ENST00000432057 TRBV25-1A0A075B6N4 114 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 E9PLD3 99 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 HSD52Q0P140 79 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 Q6ZVH6 145 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 PRADC1Q9BSG0 188 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 X6R8D5 127 aa13.92□□□□□ -0.18
VRK2-205ENST00000432057 VCX2Q9H322 139 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 HIGD1BQ9P298 99 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 GAGE12JA6NER3 117 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 GAGE1Q13065 139 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 GAGE4Q13068 117 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 GAGE5Q13069 117 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 GAGE13Q4V321 117 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 CHAC1Q9BUX1 264 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 UBE2D4Q9Y2X8 147 aa13.91□□□□□ -0.18
VRK2-205ENST00000432057 RNASE13Q5GAN3 156 aaKnown RBP13.9□□□□□ -0.18
VRK2-205ENST00000432057 MAST4O15021 2626 aa13.9□□□□□ -0.19
VRK2-205ENST00000432057 UBE2D3P61077 147 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 UBE2D2P62837 147 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 TMEM170BQ5T4T1 132 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 NFE4Q86UQ8 179 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 SPANXA1Q9NS26 97 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 TRGV4A0A0C4DH28 118 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 LOC100131303A0A0U1RQF7 123 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 AMELXQ99217 191 aa13.89□□□□□ -0.19
VRK2-205ENST00000432057 A0A0J9YXV3 536 aa13.88□□□□□ -0.19
VRK2-205ENST00000432057 WIPF1O43516 503 aa13.88□□□□□ -0.19
VRK2-205ENST00000432057 HERVK_113P61574 105 aa13.88□□□□□ -0.19
VRK2-205ENST00000432057 DEFB135Q30KP9 77 aa13.88□□□□□ -0.19
VRK2-205ENST00000432057 CIDEAO60543 219 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 Q6ZUT4 128 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 NBEAL2Q6ZNJ1 2754 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 MYMXA0A1B0GTQ4 84 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 DEFB130BP0DP73 79 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 DEFB130AP0DP74 79 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 APOC4P55056 127 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 FHL2Q14192 279 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 DAZ4Q86SG3 579 aaKnown RBP13.87□□□□□ -0.19
VRK2-205ENST00000432057 KIR2DL5BQ8NHK3 375 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 ORAOV1Q8WV07 137 aa13.87□□□□□ -0.19
VRK2-205ENST00000432057 DAZ3Q9NR90 486 aaKnown RBP13.87□□□□□ -0.19
VRK2-205ENST00000432057 TRBV6-4A0A1B0GX49 114 aa13.86□□□□□ -0.19
VRK2-205ENST00000432057 SMIM9A6NGZ8 99 aa13.86□□□□□ -0.19
VRK2-205ENST00000432057 NPSP0C0P6 89 aa13.86□□□□□ -0.19
VRK2-205ENST00000432057 TAX1BP3O14907 124 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 CRYBA4P53673 196 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 SEC11AP67812 179 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 NTM-AS1Q6ZSK4 140 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 LINC00612Q8N6U2 182 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 COX11Q9Y6N1 276 aa13.85□□□□□ -0.19
VRK2-205ENST00000432057 ZNF22P17026 224 aaPredicted RBP13.84□□□□□ -0.19
VRK2-205ENST00000432057 TSPEAR-AS2P59090 65 aa13.84□□□□□ -0.19
VRK2-205ENST00000432057 ZNF815PA8K554 130 aa13.83□□□□□ -0.2
VRK2-205ENST00000432057 LINC00694P0DN24 101 aa13.83□□□□□ -0.2
VRK2-205ENST00000432057 PRIMA1Q86XR5 153 aa13.83□□□□□ -0.2
VRK2-205ENST00000432057 FBN1P35555 2871 aaKnown RBP13.83□□□□□ -0.2
VRK2-205ENST00000432057 TMEM223A0PJW6 202 aa13.82□□□□□ -0.2
VRK2-205ENST00000432057 GCSHP23434 173 aa13.82□□□□□ -0.2
VRK2-205ENST00000432057 SBSPONQ8IVN8 264 aa13.82□□□□□ -0.2
VRK2-205ENST00000432057 TIMM21Q9BVV7 248 aa13.82□□□□□ -0.2
VRK2-205ENST00000432057 IGHV4-30-4P0DP06 118 aa13.81□□□□□ -0.2
VRK2-205ENST00000432057 MRPS36P82909 103 aaKnown RBP13.81□□□□□ -0.2
VRK2-205ENST00000432057 CMYA5Q8N3K9 4069 aa13.81□□□□□ -0.2
Retrieved 100 of 20,778 RNA–protein pairs in 87.9 ms