RNA–Protein interactions for RNA: ENST00000430976.5

PTPN4-203, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 4,154 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-203ENST00000430976 NBASA2RRP1 2371 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 ARID2Q68CP9 1835 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV3-43A0A0B4J1X8 118 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 M0R135 149 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV3-43DP0DP04 118 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 CRIPAKQ8N1N5 446 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 COL6A3P12111 3177 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 ACACAQ13085 2346 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IGLV5-45A0A087WSX0 123 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 TRBV30A0A0K0K1B3 111 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 LINC00322Q6ZN03 302 aaPredicted RBP3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IGKV1D-42A0A075B6H8 117 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IGKV3D-20A0A0C4DH25 116 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 PLA2G1BP04054 148 aaKnown RBP3.87□□□□□ -1.79
PTPN4-203ENST00000430976 CLLU1OSQ5K130 101 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 LYZL1Q6UWQ5 148 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 ZNF497Q6ZNH5 498 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 Q6ZRP5 223 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 C20orf203Q8NBC4 194 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 LINC00476Q8WZB0 136 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 IMMP1LQ96LU5 166 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 LIMD2Q9BT23 127 aa3.87□□□□□ -1.79
PTPN4-203ENST00000430976 EYSQ5T1H1 3165 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 I3L3M4 83 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 CHTF8P0CG12 524 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 LINC01547P58512 204 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-203ENST00000430976 CHCHD2P9Q5T1J5 151 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-203ENST00000430976 KLF14Q8TD94 323 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-203ENST00000430976 B9D2Q9BPU9 175 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 PCSK5Q92824 1860 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 PINLYPA6NC86 204 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 KLLNB2CW77 178 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 IGLV3-21P80748 117 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-203ENST00000430976 NREPQ16612 68 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 KCPQ6ZWJ8 1503 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 LEAP2Q969E1 77 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 KLF16Q9BXK1 252 aaPredicted RBP3.86□□□□□ -1.79
PTPN4-203ENST00000430976 MYO16Q9Y6X6 1858 aa3.86□□□□□ -1.79
PTPN4-203ENST00000430976 A0A0J9YY99 117 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 hDV103S1A0JD37 113 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 CLPSL1A2RUU4 121 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 C10orf113Q5VZT2 155 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 GGNQ86UU5 652 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 MUC3AQ02505 3323 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV7-4-1A0A0J9YVY3 117 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 C17orf98A8MV24 154 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 EPM2AB3EWF7 344 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 IGLV3-25P01717 112 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 MIAQ16674 131 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 EP300Q09472 2414 aaPredicted RBP3.85□□□□□ -1.79
PTPN4-203ENST00000430976 NOTCH3Q9UM47 2321 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 MYO18BQ8IUG5 2567 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 SPAG11BQ08648 103 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 Q1T7F1 81 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 ATP5EP2Q5VTU8 51 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 SPAG11AQ6PDA7 123 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 PRUNE2Q8WUY3 3088 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 WNK1Q9H4A3 2382 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 UNC80Q8N2C7 3258 aa3.85□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV3-21A0A0B4J1V1 117 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 TRBV10-3A0A0K0K1G6 114 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV1-46P01743 117 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 Q8N814 137 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 PLXNA2O75051 1894 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 A6NN06 94 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV3-30P01768 117 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 IGHV3-30-5P0DP03 117 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 PATE4P0C8F1 98 aa3.84□□□□□ -1.79
PTPN4-203ENST00000430976 BBC3Q96PG8 261 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-203ENST00000430976 COL11A1P12107 1806 aaPredicted RBP3.84□□□□□ -1.79
PTPN4-203ENST00000430976 IBA57-AS1B1ANH7 110 aa3.84□□□□□ -1.8
PTPN4-203ENST00000430976 CXCL17Q6UXB2 119 aa3.84□□□□□ -1.8
PTPN4-203ENST00000430976 C14orf178Q8N769 122 aaPredicted RBP3.84□□□□□ -1.8
PTPN4-203ENST00000430976 C1orf64Q8NEQ6 169 aa3.84□□□□□ -1.8
PTPN4-203ENST00000430976 U3KQK5 164 aa3.84□□□□□ -1.8
PTPN4-203ENST00000430976 FASNP49327 2511 aaKnown RBP3.83□□□□□ -1.8
PTPN4-203ENST00000430976 IGKV1-6A0A0C4DH72 117 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 K7EQG2 157 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 PATE2Q6UY27 113 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 VMO1Q7Z5L0 202 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 C11orf21Q9P2W6 132 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 TMEM263Q8WUH6 116 aaKnown RBP3.83□□□□□ -1.8
PTPN4-203ENST00000430976 KMT2EQ8IZD2 1858 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 TRAV10A0A0B4J240 114 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 NCR3O14931 201 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 EIF4EBP3O60516 100 aaPredicted RBP3.83□□□□□ -1.8
PTPN4-203ENST00000430976 DEFB110Q30KQ9 67 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 GAFA1Q96PS6 74 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 MINOS1-NBL1R4GNA1 71 aa3.83□□□□□ -1.8
PTPN4-203ENST00000430976 IGLV3-12A0A075B6K2 115 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 APELAP0DMC3 54 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 LMO4P61968 165 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 FBXL19-AS1Q494R0 122 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 Q8N3U1 123 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 ZNF71Q9NQZ8 489 aaPredicted RBP3.82□□□□□ -1.8
PTPN4-203ENST00000430976 GAS8-AS1O95177 125 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 MIR22HGQ0VDD5 57 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 HIGD2AQ9BW72 106 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 DHRS4-AS1Q9P1J3 65 aa3.82□□□□□ -1.8
PTPN4-203ENST00000430976 EML5Q05BV3 1969 aa3.82□□□□□ -1.8
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms