RNA–Protein interactions for RNA: ENST00000428863.6

MDM2-215, Transcript of MDM2 proto-oncogene, humanhuman

TSL 5 BASIC

Gene MDM2, Length 1,037 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MDM2-215ENST00000428863 A0A1B0GUV1 79 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 PANO1I0J062 215 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 FOXA3P55318 350 aaPredicted RBP9.74□□□□□ -0.85
MDM2-215ENST00000428863 TWIST1Q15672 202 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 DGAT2L7PQ6IED9 249 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 C9orf163Q8N9P6 203 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 GATD1Q8NB37 220 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 PGLYRP4Q96LB8 373 aa9.74□□□□□ -0.85
MDM2-215ENST00000428863 RPP21Q9H633 154 aaKnown RBP9.74□□□□□ -0.85
MDM2-215ENST00000428863 FAT3Q8TDW7 4589 aa9.73□□□□□ -0.85
MDM2-215ENST00000428863 TRAV26-2A0A0B4J265 109 aa9.73□□□□□ -0.85
MDM2-215ENST00000428863 KRTAP29-1A8MX34 341 aaPredicted RBP9.73□□□□□ -0.85
MDM2-215ENST00000428863 J3QL48 77 aa9.73□□□□□ -0.85
MDM2-215ENST00000428863 TAGLN2P37802 199 aaKnown RBP9.73□□□□□ -0.85
MDM2-215ENST00000428863 SLPIP03973 132 aa9.72□□□□□ -0.85
MDM2-215ENST00000428863 ALKAL2Q6UX46 152 aa9.72□□□□□ -0.85
MDM2-215ENST00000428863 AFDN-AS1Q9Y6Z5 254 aaPredicted RBP9.72□□□□□ -0.85
MDM2-215ENST00000428863 SDIM1Q6ZPB5 146 aa9.71□□□□□ -0.86
MDM2-215ENST00000428863 LYPD6BQ8NI32 183 aa9.71□□□□□ -0.86
MDM2-215ENST00000428863 RPL39LQ96EH5 51 aaKnown RBP9.71□□□□□ -0.86
MDM2-215ENST00000428863 TRAV8-4A0A0B4J246 113 aa9.7□□□□□ -0.86
MDM2-215ENST00000428863 COTL1Q14019 142 aa9.7□□□□□ -0.86
MDM2-215ENST00000428863 TMEM250H0YL14 139 aa9.69□□□□□ -0.86
MDM2-215ENST00000428863 AMTP48728 403 aa9.69□□□□□ -0.86
MDM2-215ENST00000428863 CLRN3Q8NCR9 226 aa9.69□□□□□ -0.86
MDM2-215ENST00000428863 GATCO43716 136 aaKnown RBP9.68□□□□□ -0.86
MDM2-215ENST00000428863 GAS8-AS1O95177 125 aa9.68□□□□□ -0.86
MDM2-215ENST00000428863 HNRNPA3P51991 378 aaKnown RBP9.68□□□□□ -0.86
MDM2-215ENST00000428863 CNBPP62633 177 aaKnown RBP9.68□□□□□ -0.86
MDM2-215ENST00000428863 BLOC1S1P78537 153 aa9.68□□□□□ -0.86
MDM2-215ENST00000428863 FAM231DQ6ZW35 169 aa9.68□□□□□ -0.86
MDM2-215ENST00000428863 hDV102S1A0JD36 115 aa9.67□□□□□ -0.86
MDM2-215ENST00000428863 UBE2L6O14933 153 aa9.67□□□□□ -0.86
MDM2-215ENST00000428863 IGKV2D-29A0A075B6S2 120 aaPredicted RBP9.65□□□□□ -0.86
MDM2-215ENST00000428863 IGKV2-29A2NJV5 120 aaPredicted RBP9.65□□□□□ -0.86
MDM2-215ENST00000428863 FAM231BA6NCW3 169 aa9.65□□□□□ -0.86
MDM2-215ENST00000428863 GAGE12HA6NDE8 117 aa9.65□□□□□ -0.86
MDM2-215ENST00000428863 CEBPGP53567 150 aa9.65□□□□□ -0.86
MDM2-215ENST00000428863 RPL37AP61513 92 aaKnown RBP9.65□□□□□ -0.86
MDM2-215ENST00000428863 C15orf56Q8N910 161 aa9.65□□□□□ -0.86
MDM2-215ENST00000428863 IGKV3OR2-268A0A0C4DH90 116 aa9.64□□□□□ -0.87
MDM2-215ENST00000428863 SDHAF1A6NFY7 115 aa9.64□□□□□ -0.87
MDM2-215ENST00000428863 A8MWL6 223 aa9.64□□□□□ -0.87
MDM2-215ENST00000428863 CIRBPQ14011 172 aaKnown RBP9.64□□□□□ -0.87
MDM2-215ENST00000428863 NCR2O95944 276 aa9.63□□□□□ -0.87
MDM2-215ENST00000428863 CHTF8P0CG12 524 aa9.63□□□□□ -0.87
MDM2-215ENST00000428863 SMIM15Q7Z3B0 74 aa9.63□□□□□ -0.87
MDM2-215ENST00000428863 TRBV6-5A0A0K0K1A5 114 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 OXTP01178 125 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 SRP19P09132 144 aaKnown RBP9.62□□□□□ -0.87
MDM2-215ENST00000428863 FGF6P10767 208 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 CT83Q5H943 113 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 TEX261Q6UWH6 196 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 LINC01551Q86U37 167 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 RNF185Q96GF1 192 aa9.62□□□□□ -0.87
MDM2-215ENST00000428863 IGHV3-64A0A075B6Q5 118 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 I3L3M4 83 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 APCSP02743 223 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 RPS10P46783 165 aaKnown RBP9.61□□□□□ -0.87
MDM2-215ENST00000428863 AMMECR1LQ6DCA0 310 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 RNASEKQ6P5S7 137 aaKnown RBP9.61□□□□□ -0.87
MDM2-215ENST00000428863 CHCHD10Q8WYQ3 142 aaPredicted RBP9.61□□□□□ -0.87
MDM2-215ENST00000428863 FAM210AQ96ND0 272 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 SMIM7Q9BQ49 75 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 EIF5A2Q9GZV4 153 aaKnown RBP9.61□□□□□ -0.87
MDM2-215ENST00000428863 AP5S1Q9NUS5 200 aa9.61□□□□□ -0.87
MDM2-215ENST00000428863 HIGD1CA8MV81 97 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 H7C423 109 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 NDUFS6O75380 124 aaKnown RBP9.6□□□□□ -0.87
MDM2-215ENST00000428863 TSHBP01222 138 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 ESDP10768 282 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 PMCHP20382 165 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 HIGD2BQ4VC39 106 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 TSKUQ8WUA8 353 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 OSTCQ9NRP0 149 aa9.6□□□□□ -0.87
MDM2-215ENST00000428863 A0A087WYN8 130 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 TRAV16A0A0A6YYK6 109 aaPredicted RBP9.59□□□□□ -0.87
MDM2-215ENST00000428863 A0A1B0GUT8 65 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 ZNF727A8MUV8 499 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 RAB4AP20338 218 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 POLR2KP53803 58 aaKnown RBP9.59□□□□□ -0.87
MDM2-215ENST00000428863 FOXI1Q12951 378 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 SPACA4Q8TDM5 124 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 TMEM191AQ9H0A3 160 aa9.59□□□□□ -0.87
MDM2-215ENST00000428863 PRSS3P2Q8NHM4 247 aa9.58□□□□□ -0.88
MDM2-215ENST00000428863 ST20Q9HBF5 79 aa9.58□□□□□ -0.88
MDM2-215ENST00000428863 TMEM242Q9NWH2 141 aa9.58□□□□□ -0.88
MDM2-215ENST00000428863 V9GYV3 84 aa9.58□□□□□ -0.88
MDM2-215ENST00000428863 COX6A2Q02221 97 aa9.57□□□□□ -0.88
MDM2-215ENST00000428863 CFAP161Q6P656 301 aa9.57□□□□□ -0.88
MDM2-215ENST00000428863 AMN1Q8IY45 258 aa9.57□□□□□ -0.88
MDM2-215ENST00000428863 OR5A1Q8NGJ0 315 aa9.57□□□□□ -0.88
MDM2-215ENST00000428863 DPH3Q96FX2 82 aa9.57□□□□□ -0.88
MDM2-215ENST00000428863 GVQW2A0A096LPI5 108 aaPredicted RBP9.56□□□□□ -0.88
MDM2-215ENST00000428863 LINC00959A0A1B0GUT2 108 aa9.56□□□□□ -0.88
MDM2-215ENST00000428863 C9JQL5 133 aa9.56□□□□□ -0.88
MDM2-215ENST00000428863 SMKR1H3BMG3 65 aa9.56□□□□□ -0.88
MDM2-215ENST00000428863 ZNF25P17030 456 aaPredicted RBP9.56□□□□□ -0.88
MDM2-215ENST00000428863 NUP35Q8NFH5 326 aa9.56□□□□□ -0.88
MDM2-215ENST00000428863 BORCS7Q96B45 105 aa9.56□□□□□ -0.88
Retrieved 100 of 20,778 RNA–protein pairs in 70.9 ms