RNA–Protein interactions for RNA: ENST00000428848.7

CDH13-202, Transcript of cadherin 13, humanhuman

APPRIS ALT2 TSL 2 BASIC

Gene CDH13, Length 2,195 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH13-202ENST00000428848 ZNF580Q9UK33 172 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 TEX15Q9BXT5 2789 aa6.56□□□□□ -1.36
CDH13-202ENST00000428848 IGHV3OR16-10A0A075B7F0 116 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 TRBV7-7A0A0K0K1E9 115 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 H3BMM0 161 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 H3BUX3 64 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 IGLV1-40P01703 118 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 IGHV3-11P01762 117 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 DCANP1Q8TF63 244 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 UBE2WQ96B02 151 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 C9orf85Q96MD7 179 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 SDHAF1A6NFY7 115 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 K7EMT4 169 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 CFHR3Q02985 330 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 FAM19A5Q7Z5A7 132 aaPredicted RBP6.55□□□□□ -1.36
CDH13-202ENST00000428848 TRPT1Q86TN4 253 aaKnown RBP6.55□□□□□ -1.36
CDH13-202ENST00000428848 TMEM263Q8WUH6 116 aaKnown RBP6.55□□□□□ -1.36
CDH13-202ENST00000428848 LINC01587Q99440 93 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 DAZ1Q9NQZ3 744 aaKnown RBP6.55□□□□□ -1.36
CDH13-202ENST00000428848 CENPEQ02224 2701 aa6.55□□□□□ -1.36
CDH13-202ENST00000428848 UNC79Q9P2D8 2635 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 TRAV16A0A0A6YYK6 109 aaPredicted RBP6.54□□□□□ -1.36
CDH13-202ENST00000428848 IGHV4-38-2P0DP08 117 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 EMP1P54849 157 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 RPL11P62913 178 aaKnown RBP6.54□□□□□ -1.36
CDH13-202ENST00000428848 A0A087WWL8 130 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 H3BT86 120 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 EDN2P20800 178 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 KIR2DL5BQ8NHK3 375 aa6.54□□□□□ -1.36
CDH13-202ENST00000428848 DOPEY1Q5JWR5 2465 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 IGKV3-7A0A075B6H7 116 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 IGHV3-16A0A0C4DH30 117 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 TRBV30A0A0K0K1B3 111 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 TMEM89A2RUT3 159 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 J3QQQ9 107 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 M0QY20 66 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 BLCAPP62952 87 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 LY6EQ16553 131 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 NSUN5P1Q3KNT7 163 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 IMUPQ9GZP8 106 aa6.53□□□□□ -1.36
CDH13-202ENST00000428848 NBPF19A0A087WUL8 3843 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 TEX49A0A1B0GTD5 131 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 M0R2P5 195 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 EIF4EBP3O60516 100 aaPredicted RBP6.52□□□□□ -1.36
CDH13-202ENST00000428848 LINC00694P0DN24 101 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 RHOHQ15669 191 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 DEFB121Q5J5C9 76 aa6.52□□□□□ -1.36
CDH13-202ENST00000428848 ITPR2Q14571 2701 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 CRYBG3Q68DQ2 2970 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 TRAV12-3A0A0B4J271 114 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 TMEM223A0PJW6 202 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 LGALS3P17931 250 aaKnown RBP6.52□□□□□ -1.37
CDH13-202ENST00000428848 TMEM170BQ5T4T1 132 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 DEFB104AQ8WTQ1 72 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 TMEM101Q96IK0 257 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 BEX4Q9NWD9 120 aaPredicted RBP6.52□□□□□ -1.37
CDH13-202ENST00000428848 CELSR2Q9HCU4 2923 aa6.52□□□□□ -1.37
CDH13-202ENST00000428848 F5H697 171 aa6.51□□□□□ -1.37
CDH13-202ENST00000428848 LEPROTO15243 131 aa6.51□□□□□ -1.37
CDH13-202ENST00000428848 C2orf82Q6UX34 121 aa6.51□□□□□ -1.37
CDH13-202ENST00000428848 RNF152Q8N8N0 203 aa6.51□□□□□ -1.37
CDH13-202ENST00000428848 ZNF256Q9Y2P7 627 aaPredicted RBP6.51□□□□□ -1.37
CDH13-202ENST00000428848 A0A0J9YX75 114 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 NDUFA7O95182 113 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 ZNF22P17026 224 aaPredicted RBP6.5□□□□□ -1.37
CDH13-202ENST00000428848 Q1RN00 199 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 C20orf203Q8NBC4 194 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 OPRPNQ99935 248 aaPredicted RBP6.5□□□□□ -1.37
CDH13-202ENST00000428848 CHCHD5Q9BSY4 110 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 CREBBPQ92793 2442 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 ATP5G1P05496 136 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 ACYP1P07311 99 aa6.5□□□□□ -1.37
CDH13-202ENST00000428848 IGHV1OR15-1A0A075B7D0 117 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 K7EQG2 157 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 ELANEP08246 267 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 PSMB8P28062 276 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 ZNF56Q15929 161 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 FAM74A4Q5TZK3 123 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 FAM104AQ969W3 186 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 DUX3Q96PT4 197 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 EDA2RQ9HAV5 297 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 CELSR1Q9NYQ6 3014 aa6.49□□□□□ -1.37
CDH13-202ENST00000428848 IGLV4-3A0A075B6K6 122 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 UQCRQO14949 82 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 TRIAP1O43715 76 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 C3orf22Q8N5N4 141 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 MYO9AB2RTY4 2548 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 TRAV12-2A0A075B6T6 113 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 H7C2G1 150 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 H7C423 109 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 I3L3M4 83 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 PRRC2AP48634 2157 aaKnown RBP6.48□□□□□ -1.37
CDH13-202ENST00000428848 C9orf153Q5TBE3 101 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 MUSTN1Q8IVN3 82 aa6.48□□□□□ -1.37
CDH13-202ENST00000428848 SORL1Q92673 2214 aa6.47□□□□□ -1.37
CDH13-202ENST00000428848 NACAE9PAV3 2078 aa6.47□□□□□ -1.37
CDH13-202ENST00000428848 COX6CP09669 75 aa6.47□□□□□ -1.37
CDH13-202ENST00000428848 DEFB112Q30KQ8 113 aa6.47□□□□□ -1.37
CDH13-202ENST00000428848 PYGO1Q9Y3Y4 419 aa6.47□□□□□ -1.37
CDH13-202ENST00000428848 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP6.47□□□□□ -1.37
Retrieved 100 of 20,778 RNA–protein pairs in 72.2 ms