RNA–Protein interactions for RNA: ENST00000428404.5

TRIM39-207, Transcript of tripartite motif containing 39, humanhuman

TSL 2

Gene TRIM39, Length 427 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM39-207ENST00000428404 RNASEKQ6P5S7 137 aaKnown RBP8.65□□□□□ -1.02
TRIM39-207ENST00000428404 C15orf53Q8NAA6 179 aa8.65□□□□□ -1.02
TRIM39-207ENST00000428404 DEFB104AQ8WTQ1 72 aa8.65□□□□□ -1.02
TRIM39-207ENST00000428404 TMA7Q9Y2S6 64 aaKnown RBP8.65□□□□□ -1.02
TRIM39-207ENST00000428404 CSMD3Q7Z407 3707 aa8.65□□□□□ -1.03
TRIM39-207ENST00000428404 C5orf52A6NGY3 159 aa8.64□□□□□ -1.03
TRIM39-207ENST00000428404 COTL1Q14019 142 aa8.64□□□□□ -1.03
TRIM39-207ENST00000428404 ORMDL2Q53FV1 153 aa8.64□□□□□ -1.03
TRIM39-207ENST00000428404 A0A096LNJ9 63 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 TRBV6-8A0A0A6YYG3 113 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 NUPR2A6NF83 97 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 IGLL5B9A064 214 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 NUDT3O95989 172 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 S100A6P06703 90 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 FCER1GP30273 86 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 TMEM97Q5BJF2 176 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 CHCHD7Q9BUK0 85 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 TENM2Q9NT68 2774 aa8.63□□□□□ -1.03
TRIM39-207ENST00000428404 SNRPEP62304 92 aaKnown RBP8.62□□□□□ -1.03
TRIM39-207ENST00000428404 LYPD5Q6UWN5 251 aa8.62□□□□□ -1.03
TRIM39-207ENST00000428404 WWC2-AS2Q96NR7 200 aa8.62□□□□□ -1.03
TRIM39-207ENST00000428404 APLNQ9ULZ1 77 aa8.62□□□□□ -1.03
TRIM39-207ENST00000428404 IGHV1-24A0A0C4DH33 117 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 HSBP1O75506 76 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 ESRGQ1W209 222 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 HIST3H2BBQ8N257 126 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 FAM19A2Q8N3H0 131 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 C20orf203Q8NBC4 194 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 MUC7Q8TAX7 377 aa8.61□□□□□ -1.03
TRIM39-207ENST00000428404 KLK5Q9Y337 293 aaPredicted RBP8.61□□□□□ -1.03
TRIM39-207ENST00000428404 G0S2P27469 103 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 AMTP48728 403 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 PMCHL1Q16048 86 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 LELP1Q5T871 98 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 TOMM6Q96B49 74 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 PACRGQ96M98 296 aaPredicted RBP8.6□□□□□ -1.03
TRIM39-207ENST00000428404 TMEM243Q9BU79 118 aa8.6□□□□□ -1.03
TRIM39-207ENST00000428404 TRBV25-1A0A075B6N4 114 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 IFITM10A6NMD0 228 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 HBDP02042 147 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 TCTAP57738 103 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 PDZD11Q5EBL8 140 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 C2orf66Q6UXQ4 117 aa8.59□□□□□ -1.03
TRIM39-207ENST00000428404 LINC01549A6NIU2 74 aa8.58□□□□□ -1.04
TRIM39-207ENST00000428404 H7C423 109 aa8.58□□□□□ -1.04
TRIM39-207ENST00000428404 BTF3P20290 206 aaKnown RBP8.58□□□□□ -1.04
TRIM39-207ENST00000428404 RPL39P62891 51 aaKnown RBP8.58□□□□□ -1.04
TRIM39-207ENST00000428404 PLECQ15149 4684 aaKnown RBP8.58□□□□□ -1.04
TRIM39-207ENST00000428404 CYSLTR1Q9Y271 337 aa8.58□□□□□ -1.04
TRIM39-207ENST00000428404 STARD9Q9P2P6 4700 aa8.57□□□□□ -1.04
TRIM39-207ENST00000428404 IGKV2D-29A0A075B6S2 120 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-207ENST00000428404 IGKV2-29A2NJV5 120 aaPredicted RBP8.57□□□□□ -1.04
TRIM39-207ENST00000428404 IGIPA6NJ69 53 aa8.57□□□□□ -1.04
TRIM39-207ENST00000428404 MRPL52Q86TS9 123 aaKnown RBP8.57□□□□□ -1.04
TRIM39-207ENST00000428404 TIMM21Q9BVV7 248 aa8.57□□□□□ -1.04
TRIM39-207ENST00000428404 PYGO1Q9Y3Y4 419 aa8.57□□□□□ -1.04
TRIM39-207ENST00000428404 ZFAND6Q6FIF0 208 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 ERASQ7Z444 233 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 FAM104AQ969W3 186 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 TMEM18Q96B42 140 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 HIST1H2BLQ99880 126 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 CHCHD5Q9BSY4 110 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 UBE2D4Q9Y2X8 147 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 LINC00588Q9Y4M8 146 aa8.56□□□□□ -1.04
TRIM39-207ENST00000428404 CSDC2Q9Y534 153 aaKnown RBP8.56□□□□□ -1.04
TRIM39-207ENST00000428404 VPS13DQ5THJ4 4388 aa8.55□□□□□ -1.04
TRIM39-207ENST00000428404 FGF6P10767 208 aa8.55□□□□□ -1.04
TRIM39-207ENST00000428404 CCL18P55774 89 aa8.55□□□□□ -1.04
TRIM39-207ENST00000428404 LINC00173Q6ZV60 143 aa8.55□□□□□ -1.04
TRIM39-207ENST00000428404 SPANXA1Q9NS26 97 aa8.55□□□□□ -1.04
TRIM39-207ENST00000428404 MRPS16Q9Y3D3 137 aaKnown RBP8.55□□□□□ -1.04
TRIM39-207ENST00000428404 TRAV8-6A0A0B4J262 113 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 A0A1B0GUV1 79 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 NPSP0C0P6 89 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 S100A2P29034 98 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 GAGE6Q13070 117 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 TMEM141Q96I45 108 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 SCGB3A1Q96QR1 104 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 TIMM17AQ99595 171 aa8.54□□□□□ -1.04
TRIM39-207ENST00000428404 C3orf84H3BNL1 204 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 UBE2L6O14933 153 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 ATP5LO75964 103 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 LEPROTL1O95214 131 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 FABP4P15090 132 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 ZNF25P17030 456 aaPredicted RBP8.53□□□□□ -1.04
TRIM39-207ENST00000428404 PKIAP61925 76 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 MRPS36P82909 103 aaKnown RBP8.53□□□□□ -1.04
TRIM39-207ENST00000428404 SMAGPQ0VAQ4 97 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 UPK3BQ9BT76 320 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 HSPB8Q9UJY1 196 aa8.53□□□□□ -1.04
TRIM39-207ENST00000428404 IGLV4-3A0A075B6K6 122 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 RBX1P62877 108 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 CASC10Q5T4H9 136 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 WFDC10BQ8IUB3 73 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 IFI27L1Q96BM0 104 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 OPRPNQ99935 248 aaPredicted RBP8.52□□□□□ -1.05
TRIM39-207ENST00000428404 CDC42SE2Q9NRR3 84 aa8.52□□□□□ -1.05
TRIM39-207ENST00000428404 IGLV4-60A0A075B6I1 120 aa8.51□□□□□ -1.05
TRIM39-207ENST00000428404 TMEM262E9PQX1 116 aa8.51□□□□□ -1.05
TRIM39-207ENST00000428404 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP8.51□□□□□ -1.05
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms