RNA–Protein interactions for RNA: ENST00000427383.6

CHEK1-202, Transcript of checkpoint kinase 1, humanhuman

TSL 1 (best) BASIC

Gene CHEK1, Length 1,670 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHEK1-202ENST00000427383 Q6ZTC4 211 aa11.99□□□□□ -0.49
CHEK1-202ENST00000427383 PHLDA1Q8WV24 401 aaPredicted RBP11.99□□□□□ -0.49
CHEK1-202ENST00000427383 TOMM6Q96B49 74 aa11.99□□□□□ -0.49
CHEK1-202ENST00000427383 HSPB8Q9UJY1 196 aa11.99□□□□□ -0.49
CHEK1-202ENST00000427383 IGHV3-38A0A0C4DH36 116 aa11.98□□□□□ -0.49
CHEK1-202ENST00000427383 C3orf79P0CE67 100 aa11.98□□□□□ -0.49
CHEK1-202ENST00000427383 PYY3Q5JQD4 70 aa11.98□□□□□ -0.49
CHEK1-202ENST00000427383 C2orf66Q6UXQ4 117 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 F5H768 121 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 PAX4O43316 350 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 GYPEP15421 78 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 COTL1Q14019 142 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 C11orf45Q8TAV5 145 aa11.97□□□□□ -0.49
CHEK1-202ENST00000427383 TRAV26-1A0A087WT03 109 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 DEFA6Q01524 100 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 JOSD1Q15040 202 aaPredicted RBP11.96□□□□□ -0.5
CHEK1-202ENST00000427383 NTM-AS1Q6ZSK4 140 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 C20orf203Q8NBC4 194 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 CHCHD7Q9BUK0 85 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 CYSLTR1Q9Y271 337 aa11.96□□□□□ -0.5
CHEK1-202ENST00000427383 HTN3P15516 51 aa11.95□□□□□ -0.5
CHEK1-202ENST00000427383 G0S2P27469 103 aa11.95□□□□□ -0.5
CHEK1-202ENST00000427383 NANOS2P60321 138 aaKnown RBP11.95□□□□□ -0.5
CHEK1-202ENST00000427383 KRTDAPP60985 99 aa11.95□□□□□ -0.5
CHEK1-202ENST00000427383 RPL39P62891 51 aaKnown RBP11.95□□□□□ -0.5
CHEK1-202ENST00000427383 Q8N976 141 aa11.95□□□□□ -0.5
CHEK1-202ENST00000427383 LINC01549A6NIU2 74 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 SMIM6P0DI80 62 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 GTSF1LQ9H1H1 148 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 FBN3Q75N90 2809 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 A0A0J9YY99 117 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 SYS1-DBNDD2H3BUS1 97 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 SPATA12Q7Z6I5 190 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 IFI27L1Q96BM0 104 aa11.94□□□□□ -0.5
CHEK1-202ENST00000427383 DNAH7Q8WXX0 4024 aa11.93□□□□□ -0.5
CHEK1-202ENST00000427383 IGIPA6NJ69 53 aa11.93□□□□□ -0.5
CHEK1-202ENST00000427383 MAP1LC3CQ9BXW4 147 aa11.93□□□□□ -0.5
CHEK1-202ENST00000427383 DYNC2H1Q8NCM8 4307 aaKnown RBP11.92□□□□□ -0.5
CHEK1-202ENST00000427383 H3BNG1 76 aa11.92□□□□□ -0.5
CHEK1-202ENST00000427383 ATP5LO75964 103 aa11.92□□□□□ -0.5
CHEK1-202ENST00000427383 ERASQ7Z444 233 aa11.92□□□□□ -0.5
CHEK1-202ENST00000427383 NHLRC4P0CG21 123 aaPredicted RBP11.91□□□□□ -0.5
CHEK1-202ENST00000427383 ATP6V0E2Q8NHE4 81 aa11.91□□□□□ -0.5
CHEK1-202ENST00000427383 SCGB3A1Q96QR1 104 aa11.91□□□□□ -0.5
CHEK1-202ENST00000427383 TIMM17AQ99595 171 aa11.91□□□□□ -0.5
CHEK1-202ENST00000427383 CDPF1Q6NVV7 123 aa11.9□□□□□ -0.5
CHEK1-202ENST00000427383 PET117Q6UWS5 81 aa11.9□□□□□ -0.5
CHEK1-202ENST00000427383 CSMD3Q7Z407 3707 aa11.9□□□□□ -0.51
CHEK1-202ENST00000427383 A0A096LPF7 62 aa11.89□□□□□ -0.51
CHEK1-202ENST00000427383 TRBV6-8A0A0A6YYG3 113 aa11.89□□□□□ -0.51
CHEK1-202ENST00000427383 BORCS8-MEF2BH3BNR1 382 aaPredicted RBP11.89□□□□□ -0.51
CHEK1-202ENST00000427383 PYGO1Q9Y3Y4 419 aa11.89□□□□□ -0.51
CHEK1-202ENST00000427383 IGKV2D-29A0A075B6S2 120 aaPredicted RBP11.88□□□□□ -0.51
CHEK1-202ENST00000427383 DEFB131BA0A096LNP1 70 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 IGKV2-29A2NJV5 120 aaPredicted RBP11.88□□□□□ -0.51
CHEK1-202ENST00000427383 MRPL23Q16540 153 aaKnown RBP11.88□□□□□ -0.51
CHEK1-202ENST00000427383 TMEM97Q5BJF2 176 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 LINC01545Q5VT33 79 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 LINC00518Q8N0U6 118 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 FAM104AQ969W3 186 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 UBE2D4Q9Y2X8 147 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 ICOSQ9Y6W8 199 aa11.88□□□□□ -0.51
CHEK1-202ENST00000427383 SCGB1D1O95968 90 aa11.87□□□□□ -0.51
CHEK1-202ENST00000427383 BAALCQ8WXS3 180 aa11.87□□□□□ -0.51
CHEK1-202ENST00000427383 TMEM141Q96I45 108 aa11.87□□□□□ -0.51
CHEK1-202ENST00000427383 TRBV25-1A0A075B6N4 114 aa11.87□□□□□ -0.51
CHEK1-202ENST00000427383 TRAV10A0A0B4J240 114 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 H0Y8G0 127 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 ODF1Q14990 250 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 LGALS9CQ6DKI2 356 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 SH2D6Q7Z4S9 175 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 C12orf57Q99622 126 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 TMEM243Q9BU79 118 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 SPANXA1Q9NS26 97 aa11.86□□□□□ -0.51
CHEK1-202ENST00000427383 IGLV4-3A0A075B6K6 122 aa11.85□□□□□ -0.51
CHEK1-202ENST00000427383 NPSP0C0P6 89 aa11.85□□□□□ -0.51
CHEK1-202ENST00000427383 MRPL52Q86TS9 123 aaKnown RBP11.85□□□□□ -0.51
CHEK1-202ENST00000427383 TIMM21Q9BVV7 248 aa11.85□□□□□ -0.51
CHEK1-202ENST00000427383 TRAV12-1A0A0B4J245 112 aa11.84□□□□□ -0.51
CHEK1-202ENST00000427383 CEMP1Q6PRD7 247 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-202ENST00000427383 Q6ZN92 141 aa11.84□□□□□ -0.51
CHEK1-202ENST00000427383 TEX43Q6ZNM6 134 aa11.84□□□□□ -0.51
CHEK1-202ENST00000427383 H7C423 109 aa11.84□□□□□ -0.51
CHEK1-202ENST00000427383 PRSS1P07477 247 aa11.84□□□□□ -0.51
CHEK1-202ENST00000427383 OPRPNQ99935 248 aaPredicted RBP11.84□□□□□ -0.51
CHEK1-202ENST00000427383 CSDC2Q9Y534 153 aaKnown RBP11.84□□□□□ -0.51
CHEK1-202ENST00000427383 C20orf202A1L168 122 aa11.83□□□□□ -0.52
CHEK1-202ENST00000427383 FGF6P10767 208 aa11.83□□□□□ -0.52
CHEK1-202ENST00000427383 PMCHL2Q9BQD1 86 aa11.83□□□□□ -0.52
CHEK1-202ENST00000427383 A0A087WX48 190 aa11.82□□□□□ -0.52
CHEK1-202ENST00000427383 TIRAPP58753 221 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 MRPS36P82909 103 aaKnown RBP11.81□□□□□ -0.52
CHEK1-202ENST00000427383 Q6ZUT4 128 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 PMVKQ15126 192 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 ZC2HC1BQ5TFG8 222 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 AMELXQ99217 191 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 CST9LQ9H4G1 147 aa11.81□□□□□ -0.52
CHEK1-202ENST00000427383 LYSTQ99698 3801 aa11.8□□□□□ -0.52
CHEK1-202ENST00000427383 PRSS29PA6NIE9 313 aa11.8□□□□□ -0.52
CHEK1-202ENST00000427383 UBE2L6O14933 153 aa11.8□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 318.1 ms