RNA–Protein interactions for RNA: ENST00000425048.1

LINC01040-201, Transcript of long intergenic non-protein coding RNA 1040, humanhuman

TSL 2 BASIC

Gene LINC01040, Length 666 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC01040-201ENST00000425048 TRBV7-6A0A0J9YX20 115 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 LOC100131303A0A0U1RQF7 123 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 PLAC8L1A1L4L8 177 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 KNCNA6PVL3 124 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 ZNF815PA8K554 130 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 IBA57-AS1B1ANH7 110 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 E7EUB6 86 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 F8VRH5 84 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 SMKR1H3BMG3 65 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 LST1O00453 97 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 CCL21O00585 134 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 PLNP26678 52 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 CD70P32970 193 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 UBE2E1P51965 193 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 MRPS36P82909 103 aaKnown RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 CIRBPQ14011 172 aaKnown RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 SS18Q15532 418 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 RHOHQ15669 191 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 DEFB134Q4QY38 66 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 ORMDL2Q53FV1 153 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 C16orf47Q6ZP98 133 aaPredicted RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 Q86TA4 180 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 DAND5Q8N907 189 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 LINC00304Q8N9R0 145 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 KLF14Q8TD94 323 aaPredicted RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 EEF1AKMT3Q96AZ1 226 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 DOCK10Q96BY6 2186 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 FMC1Q96HJ9 113 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 COX14Q96I36 57 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 UBE2E2Q96LR5 201 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 AMELXQ99217 191 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 TM2D3Q9BRN9 247 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 SLC50A1Q9BRV3 221 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 TMEM243Q9BU79 118 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 TIMM21Q9BVV7 248 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 FGF23Q9GZV9 251 aaPredicted RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 RBM12B-AS1Q9P1G2 102 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 LSM7Q9UK45 103 aaKnown RBP1.87□□□□□ -2.11
LINC01040-201ENST00000425048 C22orf24Q9Y442 160 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 PCNX2A6NKB5 2137 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 PI4KAP42356 2102 aa1.87□□□□□ -2.11
LINC01040-201ENST00000425048 IGHV1OR15-9A0A0B4J2B8 117 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 NDUFA3O95167 84 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 IGF1P05019 195 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 CCKP06307 115 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 XCL1P47992 114 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 TSPEAR-AS2P59090 65 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 PCBD1P61457 104 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 NNATQ16517 81 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 PVRIGQ6DKI7 326 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 PATE2Q6UY27 113 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 LINC00596Q86U02 117 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 Q8N2B8 174 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 FAM216BQ8N7L0 139 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 EMC6Q9BV81 110 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 XCL2Q9UBD3 114 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 UBE2D4Q9Y2X8 147 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 PRR14LQ5THK1 2151 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 MALRD1Q5VYJ5 2156 aa1.86□□□□□ -2.11
LINC01040-201ENST00000425048 TRBV19A0A075B6N1 114 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 TRAV3A0A0B4J244 114 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 M0R1B8 84 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 CKS2P33552 79 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 CRIP1P50238 77 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 SNRPD3P62318 126 aaKnown RBP1.85□□□□□ -2.11
LINC01040-201ENST00000425048 KRTAP6-3Q3LI67 103 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 FAM229BQ4G0N7 80 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 CHCHD2P9Q5T1J5 151 aaPredicted RBP1.85□□□□□ -2.11
LINC01040-201ENST00000425048 C10orf128Q5T292 105 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 LYZL1Q6UWQ5 148 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 UNQ9165/PRO28630Q6UXU0 137 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 LINC00305Q7Z4B0 112 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 MRPL55Q7Z7F7 128 aaKnown RBP1.85□□□□□ -2.11
LINC01040-201ENST00000425048 Q8IYB0 196 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 DYNAPQ8N1N2 210 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 COPS9Q8WXC6 57 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 CLEC2BQ92478 149 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 DYNLRB1Q9NP97 96 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 ICOSQ9Y6W8 199 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 COL27A1Q8IZC6 1860 aaPredicted RBP1.85□□□□□ -2.11
LINC01040-201ENST00000425048 PLXNB1O43157 2135 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 ZGRF1Q86YA3 2104 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 ARFGEF3Q5TH69 2177 aa1.85□□□□□ -2.11
LINC01040-201ENST00000425048 MUC6Q6W4X9 2439 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGKV1D-37A0A075B6S9 117 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 A0A087WVE0 104 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGHV1OR21-1A0A087WYE8 117 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGLV3-32A0A0A0MS00 114 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TRAV16A0A0A6YYK6 109 aaPredicted RBP1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGHV1-58A0A0C4DH39 117 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGKV3D-7A0A0C4DH55 119 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 IGIPA6NJ69 53 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 C8orf87E5RJ46 101 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 H0YGG7 62 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 BCE1O60756 84 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 TIMM17BO60830 172 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 MAGEA5P43359 124 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 ATP5EP56381 51 aaPredicted RBP1.84□□□□□ -2.11
LINC01040-201ENST00000425048 KLKP1Q107X0 134 aa1.84□□□□□ -2.11
LINC01040-201ENST00000425048 FAM222AQ5U5X8 452 aa1.84□□□□□ -2.11
Retrieved 100 of 20,778 RNA–protein pairs in 11.3 ms