RNA–Protein interactions for RNA: ENST00000424555.5

SEMA3A-203, Transcript of semaphorin 3A, humanhuman

TSL 4

Gene SEMA3A, Length 568 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEMA3A-203ENST00000424555 TGFAP01135 160 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 RBMY1DP0C7P1 496 aaKnown RBP5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 COTL1Q14019 142 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 SPINK13Q1W4C9 94 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 TCTEX1D4Q5JR98 221 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 NDUFA11Q86Y39 141 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 LRRC75A-AS1Q8N1F1 130 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 ATP6V0E2Q8NHE4 81 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 ZFHX3Q15911 3703 aa5.12□□□□□ -1.59
SEMA3A-203ENST00000424555 H3BMG7 143 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 J3QQQ9 107 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 TSPAN13O95857 204 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 CFC1BP0CG36 223 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 CFC1P0CG37 223 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 ZNF22P17026 224 aaPredicted RBP5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 MRPS36P82909 103 aaKnown RBP5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 OPRPNQ99935 248 aaPredicted RBP5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 USP9YO00507 2555 aaPredicted RBP5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 FLNCQ14315 2725 aa5.11□□□□□ -1.59
SEMA3A-203ENST00000424555 A8MWV9 139 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 M0QXV9 152 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 M0R2P5 195 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 RHODO00212 210 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 IGKV3-20P01619 116 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 SRSF9Q13242 221 aaKnown RBP eCLIP5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 CFAP126Q5VTH2 177 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 SCGB1D4Q6XE38 83 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 C10orf126Q8N4M7 172 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 C11orf72Q8NBR9 251 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 DNAJC30Q96LL9 226 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 DUX5Q96PT3 197 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 BEX4Q9NWD9 120 aaPredicted RBP5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 IGSF10Q6WRI0 2623 aa5.1□□□□□ -1.59
SEMA3A-203ENST00000424555 A0A0J9YXV3 536 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 KNCNA6PVL3 124 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 RS1O15537 224 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 SCGB1A1P11684 91 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 EMP1P54849 157 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 DEFB131AP59861 70 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 RPL24P83731 157 aaKnown RBP5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 ZNF56Q15929 161 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 DEFB114Q30KQ6 69 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 TMEM170BQ5T4T1 132 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 FAM74A4Q5TZK3 123 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 C18orf65Q6ZTR6 163 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 SH2D6Q7Z4S9 175 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 TMEM86BQ8N661 226 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 Q8N9P0 234 aaPredicted RBP5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 TMEM263Q8WUH6 116 aaKnown RBP5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 C4orf3Q8WVX3 66 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 RNF183Q96D59 192 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 LITAFQ99732 161 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 CHCHD7Q9BUK0 85 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 VCX2Q9H322 139 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 CREBBPQ92793 2442 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 DOPEY2Q9Y3R5 2298 aa5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 PRRC2AP48634 2157 aaKnown RBP5.09□□□□□ -1.59
SEMA3A-203ENST00000424555 COL12A1Q99715 3063 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 CELSR1Q9NYQ6 3014 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 TRBV20-1A0A075B6N2 111 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 TRAV25A0A0B4J276 109 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 A0A0B4J2C4 111 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 J3QR89 54 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 IGHV3-53P01767 116 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 IGHV3-33P01772 117 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 SCGB2A2Q13296 93 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 ETDBQ3ZM63 59 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 SPXQ9BT56 116 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 TIMM21Q9BVV7 248 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 SPANXA1Q9NS26 97 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 MRPL16Q9NX20 251 aaKnown RBP5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 PRO1854Q9UHT4 67 aa5.08□□□□□ -1.6
SEMA3A-203ENST00000424555 A0A0J9YXY3 114 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 TINCRA0A1B0GVN0 87 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 TMEM238C9JI98 176 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 LGALS3P17931 250 aaKnown RBP5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 DEFB113Q30KQ7 82 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 LYRM7Q5U5X0 104 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 FAM19A3Q7Z5A8 133 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 TMEM61Q8N0U2 210 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 MAPK1IP1LQ8NDC0 245 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 DEFB104AQ8WTQ1 72 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 CARD19Q96LW7 228 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 SIGMAR1Q99720 223 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 MAP6D1Q9H9H5 199 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 PEMTQ9UBM1 199 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 Q9UF83 564 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 UBE2D4Q9Y2X8 147 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 FBN2P35556 2912 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 ACACBO00763 2458 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 SORL1Q92673 2214 aa5.07□□□□□ -1.6
SEMA3A-203ENST00000424555 CELSR2Q9HCU4 2923 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 IGLV5-45A0A087WSX0 123 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 IGHV1-58A0A0C4DH39 117 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 A4D1N5 150 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 TCL1BO95988 128 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 IGHV3-30-3P0DP02 117 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 CD28P10747 220 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 ZNF415Q09FC8 603 aa5.06□□□□□ -1.6
SEMA3A-203ENST00000424555 MUSTN1Q8IVN3 82 aa5.06□□□□□ -1.6
Retrieved 100 of 20,778 RNA–protein pairs in 47.4 ms