RNA–Protein interactions for RNA: ENST00000422875.5

TRAPPC10-203, Transcript of trafficking protein particle complex 10, humanhuman

TSL 1 (best)

Gene TRAPPC10, Length 5,267 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAPPC10-203ENST00000422875 CRYGBP07316 175 aa13.25□□□□□ -0.29
TRAPPC10-203ENST00000422875 GAS8-AS1O95177 125 aa13.25□□□□□ -0.29
TRAPPC10-203ENST00000422875 COL4A4P53420 1690 aaPredicted RBP13.24□□□□□ -0.29
TRAPPC10-203ENST00000422875 PCNTO95613 3336 aa13.24□□□□□ -0.29
TRAPPC10-203ENST00000422875 MIAQ16674 131 aa13.24□□□□□ -0.29
TRAPPC10-203ENST00000422875 C20orf173Q96LM9 149 aa13.24□□□□□ -0.29
TRAPPC10-203ENST00000422875 ODF3BA8MYP8 253 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 ATP5G1P05496 136 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 SMAD5-AS1Q9Y6J3 95 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 C16orf74Q96GX8 76 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 CDKN2A-AS1Q9UH64 79 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 PRB2P02812 416 aaPredicted RBP13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 C14orf132Q9NPU4 83 aa13.23□□□□□ -0.29
TRAPPC10-203ENST00000422875 CAMK2N2Q96S95 79 aa13.22□□□□□ -0.29
TRAPPC10-203ENST00000422875 ANKRD11Q6UB99 2663 aaPredicted RBP13.22□□□□□ -0.29
TRAPPC10-203ENST00000422875 LMO4P61968 165 aa13.21□□□□□ -0.29
TRAPPC10-203ENST00000422875 DEFB4AO15263 64 aa13.21□□□□□ -0.29
TRAPPC10-203ENST00000422875 ZNF22P17026 224 aaPredicted RBP13.21□□□□□ -0.29
TRAPPC10-203ENST00000422875 NDUFV3P56181 108 aaKnown RBP13.21□□□□□ -0.29
TRAPPC10-203ENST00000422875 PSMB8P28062 276 aa13.21□□□□□ -0.29
TRAPPC10-203ENST00000422875 NCR3O14931 201 aa13.21□□□□□ -0.3
TRAPPC10-203ENST00000422875 ZFAND2AQ8N6M9 145 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 Q8N976 141 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 IGHV3-30P01768 117 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 IGHV3-33P01772 117 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 IGHV3-30-5P0DP03 117 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 ZFAND3Q9H8U3 227 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 U3KQK5 164 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 NUP210LQ5VU65 1888 aa13.2□□□□□ -0.3
TRAPPC10-203ENST00000422875 HHLA3Q9XRX5 114 aa13.19□□□□□ -0.3
TRAPPC10-203ENST00000422875 LINC00643Q86TS7 51 aa13.19□□□□□ -0.3
TRAPPC10-203ENST00000422875 C1orf43Q9BWL3 253 aa13.19□□□□□ -0.3
TRAPPC10-203ENST00000422875 C11orf21Q9P2W6 132 aa13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 PRRC2CQ9Y520 2896 aaKnown RBP13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 A6NDX4 124 aa13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 FBXL19-AS1Q494R0 122 aa13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 IGLV4-3A0A075B6K6 122 aa13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 INSL3P51460 131 aa13.18□□□□□ -0.3
TRAPPC10-203ENST00000422875 TMEM258P61165 79 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 URB1-AS1Q96HZ7 61 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 J3KT08 172 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 LINC00467Q9BRT7 94 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 TRIAP1O43715 76 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 Q6ZTI0 123 aa13.17□□□□□ -0.3
TRAPPC10-203ENST00000422875 JMJD7-PLA2G4BH0Y9G9 81 aa13.16□□□□□ -0.3
TRAPPC10-203ENST00000422875 UBE2BP63146 152 aa13.16□□□□□ -0.3
TRAPPC10-203ENST00000422875 A8MZ25 164 aa13.16□□□□□ -0.3
TRAPPC10-203ENST00000422875 CEP350Q5VT06 3117 aa13.15□□□□□ -0.3
TRAPPC10-203ENST00000422875 LY6LH3BQJ8 138 aa13.15□□□□□ -0.3
TRAPPC10-203ENST00000422875 FUSP35637 526 aaKnown RBP eCLIP13.15□□□□□ -0.3
TRAPPC10-203ENST00000422875 LTBP2Q14767 1821 aa13.15□□□□□ -0.3
TRAPPC10-203ENST00000422875 SPANXCQ9NY87 97 aa13.15□□□□□ -0.3
TRAPPC10-203ENST00000422875 NRACQ8N912 160 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 ZNF462Q96JM2 2506 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 TMEM223A0PJW6 202 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 PROK1P58294 105 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 HIST2H2BDQ6DRA6 164 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 RPL18AQ02543 176 aaKnown RBP13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 SPAG11BQ08648 103 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 NREPQ16612 68 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 ETDCA0A1B0GVM5 59 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 MAP6D1Q9H9H5 199 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 KLK12Q9UKR0 248 aa13.14□□□□□ -0.31
TRAPPC10-203ENST00000422875 DEFB113Q30KQ7 82 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 PIK3CD-AS1Q5SR53 167 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 TRAV23DV6A0A075B6W5 121 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 K7EQG2 157 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 M0QY20 66 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 WFDC11Q8NEX6 87 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 DEFB135Q30KP9 77 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 SDIM1Q6ZPB5 146 aa13.13□□□□□ -0.31
TRAPPC10-203ENST00000422875 PRR9Q5T870 116 aa13.12□□□□□ -0.31
TRAPPC10-203ENST00000422875 TRBV10-1A0A0K0K1A3 114 aa13.12□□□□□ -0.31
TRAPPC10-203ENST00000422875 UTRNP46939 3433 aa13.12□□□□□ -0.31
TRAPPC10-203ENST00000422875 SPART-AS1P0CW21 52 aa13.12□□□□□ -0.31
TRAPPC10-203ENST00000422875 TMEM263Q8WUH6 116 aaKnown RBP13.11□□□□□ -0.31
TRAPPC10-203ENST00000422875 C10orf99Q6UWK7 81 aa13.11□□□□□ -0.31
TRAPPC10-203ENST00000422875 Q6ZS46 218 aa13.11□□□□□ -0.31
TRAPPC10-203ENST00000422875 SPTBN4Q9H254 2564 aa13.1□□□□□ -0.31
TRAPPC10-203ENST00000422875 MRPS12O15235 138 aaKnown RBP13.1□□□□□ -0.31
TRAPPC10-203ENST00000422875 SLPIP03973 132 aa13.1□□□□□ -0.31
TRAPPC10-203ENST00000422875 EBI3Q14213 229 aa13.1□□□□□ -0.31
TRAPPC10-203ENST00000422875 LINC00308Q8TCZ7 52 aa13.1□□□□□ -0.31
TRAPPC10-203ENST00000422875 CHD8Q9HCK8 2581 aa13.09□□□□□ -0.31
TRAPPC10-203ENST00000422875 RNASE3P12724 160 aaKnown RBP13.09□□□□□ -0.31
TRAPPC10-203ENST00000422875 CFAP126Q5VTH2 177 aa13.09□□□□□ -0.31
TRAPPC10-203ENST00000422875 MTORP42345 2549 aa13.09□□□□□ -0.31
TRAPPC10-203ENST00000422875 TMEM256-PLSCR3K7ERE1 68 aa13.09□□□□□ -0.31
TRAPPC10-203ENST00000422875 TMEM89A2RUT3 159 aa13.08□□□□□ -0.31
TRAPPC10-203ENST00000422875 NDUFA1O15239 70 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 XGP55808 180 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 ATG2AQ2TAZ0 1938 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 TRBV27A0A0K0K1C4 114 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 C5orf47Q569G3 176 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 C20orf197Q8N268 126 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 RMI2Q96E14 147 aa13.08□□□□□ -0.32
TRAPPC10-203ENST00000422875 TNFRSF13BO14836 293 aaPredicted RBP13.07□□□□□ -0.32
TRAPPC10-203ENST00000422875 EML5Q05BV3 1969 aa13.06□□□□□ -0.32
TRAPPC10-203ENST00000422875 C19orf84I3L1E1 186 aa13.06□□□□□ -0.32
TRAPPC10-203ENST00000422875 DIRC1Q969H9 104 aa13.06□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 171.9 ms