RNA–Protein interactions for RNA: ENST00000422797.5

LIMS1-207, Transcript of LIM zinc finger domain containing 1, humanhuman

TSL 1 (best)

Gene LIMS1, Length 1,544 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS1-207ENST00000422797 BSNQ9UPA5 3926 aa8.08□□□□□ -1.12
LIMS1-207ENST00000422797 TGFAP01135 160 aa8.08□□□□□ -1.12
LIMS1-207ENST00000422797 DEFB121Q5J5C9 76 aa8.08□□□□□ -1.12
LIMS1-207ENST00000422797 C2orf82Q6UX34 121 aa8.08□□□□□ -1.12
LIMS1-207ENST00000422797 SVIPQ8NHG7 77 aa8.08□□□□□ -1.12
LIMS1-207ENST00000422797 IGLV5-45A0A087WSX0 123 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 H7C2G1 150 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 C19orf84I3L1E1 186 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 LST1O00453 97 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 NDUFA1O15239 70 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 IGKV3-20P01619 116 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 GAGE5Q13069 117 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 GAGE6Q13070 117 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 TMEM61Q8N0U2 210 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 WFDC12Q8WWY7 111 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 UBE2D4Q9Y2X8 147 aa8.07□□□□□ -1.12
LIMS1-207ENST00000422797 ADGRG4Q8IZF6 3080 aa8.06□□□□□ -1.12
LIMS1-207ENST00000422797 IGHV3-64A0A075B6Q5 118 aa8.06□□□□□ -1.12
LIMS1-207ENST00000422797 ACYP1P07311 99 aa8.06□□□□□ -1.12
LIMS1-207ENST00000422797 PRSS2P07478 247 aa8.06□□□□□ -1.12
LIMS1-207ENST00000422797 IGHV4-30-2A0A087WSY4 118 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 IGHV3-53P01767 116 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 EDN2P20800 178 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 HOXD3P31249 432 aaPredicted RBP8.05□□□□□ -1.12
LIMS1-207ENST00000422797 SYNJ2BPP57105 145 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 BEAN1Q3B7T3 259 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 TTC32Q5I0X7 151 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 LINC01356Q8N9X3 169 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 CLUHP3Q96NS8 147 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 DUX5Q96PT3 197 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 DUX3Q96PT4 197 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 CHCHD7Q9BUK0 85 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 PEMTQ9UBM1 199 aa8.05□□□□□ -1.12
LIMS1-207ENST00000422797 CYSRT1A8MQ03 144 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 NDUFV3P56181 108 aaKnown RBP8.04□□□□□ -1.12
LIMS1-207ENST00000422797 HERVK_113P63121 156 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 FAM19A3Q7Z5A8 133 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 FAM104AQ969W3 186 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 VPREB3Q9UKI3 123 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 SPTA1P02549 2419 aa8.04□□□□□ -1.12
LIMS1-207ENST00000422797 H7C423 109 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 IGHV4-59P01825 116 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 DEFB104AQ8WTQ1 72 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 KALRNO60229 2985 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 RS1O15537 224 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 INSP01308 110 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 PLA2G2AP14555 144 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 GNLYP22749 145 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 DEFB112Q30KQ8 113 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 TMEM95Q3KNT9 176 aa8.03□□□□□ -1.12
LIMS1-207ENST00000422797 BEX4Q9NWD9 120 aaPredicted RBP8.03□□□□□ -1.12
LIMS1-207ENST00000422797 LAMA5O15230 3695 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 TRAV8-3A0A0A6YYJ7 113 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 IGLV5-39A0A0G2JS06 123 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 TEX49A0A1B0GTD5 131 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE12JA6NER3 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE7O76087 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE12FP0CL80 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE12GP0CL81 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE12IP0CL82 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 GAGE4Q13068 117 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 DGAT2L7PQ6IED9 249 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 C15orf53Q8NAA6 179 aa8.02□□□□□ -1.13
LIMS1-207ENST00000422797 CSDC2Q9Y534 153 aaKnown RBP8.02□□□□□ -1.13
LIMS1-207ENST00000422797 HRNRQ86YZ3 2850 aaPredicted RBP8.02□□□□□ -1.13
LIMS1-207ENST00000422797 DEFB131AP59861 70 aa8.01□□□□□ -1.13
LIMS1-207ENST00000422797 HERV-K104P63124 156 aa8.01□□□□□ -1.13
LIMS1-207ENST00000422797 ADAMTSL4-AS1Q5T5F5 129 aa8.01□□□□□ -1.13
LIMS1-207ENST00000422797 IMUPQ9GZP8 106 aa8.01□□□□□ -1.13
LIMS1-207ENST00000422797 TENM4Q6N022 2769 aa8.01□□□□□ -1.13
LIMS1-207ENST00000422797 UNC79Q9P2D8 2635 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 TRBV10-1A0A0K0K1A3 114 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 TRBV7-7A0A0K0K1E9 115 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 ADARB2-AS1A8MUL3 147 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 COX7A2LO14548 114 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 RBMY1A1P0DJD3 496 aaKnown RBP8□□□□□ -1.13
LIMS1-207ENST00000422797 RBMY1CP0DJD4 496 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 LY6DQ14210 128 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 RBMY1FQ15415 496 aaKnown RBP8□□□□□ -1.13
LIMS1-207ENST00000422797 ABCA2Q9BZC7 2435 aa8□□□□□ -1.13
LIMS1-207ENST00000422797 TRAV4A0A0B4J268 109 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 KNCNA6PVL3 124 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 AVPP01185 164 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 TRACP01848 142 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 PF4P02776 101 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 C11orf72Q8NBR9 251 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 OVOL2Q9BRP0 275 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 ZNF702PQ9H963 129 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 ZNF462Q96JM2 2506 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 MYO18BQ8IUG5 2567 aa7.99□□□□□ -1.13
LIMS1-207ENST00000422797 IGKV2D-29A0A075B6S2 120 aaPredicted RBP7.98□□□□□ -1.13
LIMS1-207ENST00000422797 IGHV3-73A0A0B4J1V6 119 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 IGKV2-29A2NJV5 120 aaPredicted RBP7.98□□□□□ -1.13
LIMS1-207ENST00000422797 Q6YL49 198 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 LINC00308Q8TCZ7 52 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 TMEM101Q96IK0 257 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 LINC01587Q99440 93 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 CFAP46Q8IYW2 2715 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 TRAV25A0A0B4J276 109 aa7.98□□□□□ -1.13
LIMS1-207ENST00000422797 J3QKU1 62 aa7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms